RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 C17orf112F2Z3M2 114 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 PROP1O75360 226 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 TNFSF13O75888 250 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 MMP23AO75900 390 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 C1QTNF9P0C862 333 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 ARL14EPLP0DKL9 152 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 P2RY6Q15077 328 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 SPATA31B1PQ5VZV4 182 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 HSD17B10Q99714 261 aaKnown RBP11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 MS4A5Q9H3V2 200 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 OR6C3Q9NZP0 311 aa11.34□□□□□ -0.59
PRPF40B-209ENST00000548825 CEACAM1P13688 526 aa11.33□□□□□ -0.6
PRPF40B-209ENST00000548825 DUTP33316 252 aaKnown RBP11.33□□□□□ -0.6
PRPF40B-209ENST00000548825 RPL23P62829 140 aaKnown RBP11.33□□□□□ -0.6
PRPF40B-209ENST00000548825 MRPS11P82912 194 aaKnown RBP11.33□□□□□ -0.6
PRPF40B-209ENST00000548825 ACOT6Q3I5F7 207 aaPredicted RBP11.33□□□□□ -0.6
PRPF40B-209ENST00000548825 MORN2Q502X0 79 aa11.33□□□□□ -0.6
PRPF40B-209ENST00000548825 NAT8Q9UHE5 227 aa11.33□□□□□ -0.6
PRPF40B-209ENST00000548825 XKRY2A2RUG3 117 aa11.33□□□□□ -0.6
PRPF40B-209ENST00000548825 IGHV2-5P01817 119 aa11.33□□□□□ -0.6
PRPF40B-209ENST00000548825 IRF2P14316 349 aa11.33□□□□□ -0.6
PRPF40B-209ENST00000548825 GAMTQ14353 236 aa11.33□□□□□ -0.6
PRPF40B-209ENST00000548825 ACY3Q96HD9 319 aa11.33□□□□□ -0.6
PRPF40B-209ENST00000548825 TCEAL7Q9BRU2 100 aa11.33□□□□□ -0.6
PRPF40B-209ENST00000548825 MRPL37Q9BZE1 423 aaKnown RBP11.33□□□□□ -0.6
PRPF40B-209ENST00000548825 DKK4Q9UBT3 224 aa11.33□□□□□ -0.6
PRPF40B-209ENST00000548825 TNRC6BQ9UPQ9 1833 aaKnown RBP11.33□□□□□ -0.6
PRPF40B-209ENST00000548825 IFITM10A6NMD0 228 aa11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 CD33P20138 364 aa11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 RAB4BP61018 213 aa11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 OR4P4Q8NGL7 312 aa11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 PACRGQ96M98 296 aaPredicted RBP11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 CIB3Q96Q77 187 aaPredicted RBP11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 ARHGAP32A7KAX9 2087 aa11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 C15orf62A8K5M9 175 aa11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 ENSAO43768 121 aaKnown RBP11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 OR7C2O60412 319 aa11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 CDX1P47902 265 aaPredicted RBP11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 USF2Q15853 346 aaPredicted RBP11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 C1orf229Q6ZS94 237 aaPredicted RBP11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 TCF23Q7RTU1 214 aa11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 OR10A7Q8NGE5 316 aa11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 NEIL1Q96FI4 390 aaPredicted RBP11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 RPH3ALQ9UNE2 315 aa11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 PXMP4Q9Y6I8 212 aa11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 CCL3L1P16619 93 aa11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 B2MP61769 119 aa11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 MEGF10Q96KG7 1140 aa11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 PSMG3Q9BT73 122 aaPredicted RBP11.32□□□□□ -0.6
PRPF40B-209ENST00000548825 PLAUP00749 431 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 GZMHP20718 246 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 HOXA5P20719 270 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 TCL1AP56279 114 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 SEM1Q6ZVN7 128 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 MRPL41Q8IXM3 137 aaKnown RBP11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 SGK494Q96LW2 274 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 AGMATQ9BSE5 352 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 ASCL3Q9NQ33 180 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 TCF19Q9Y242 345 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 SAA2-SAA4A0A096LPE2 208 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 TRGV10A0A0A0MS01 117 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 SLC17A3O00476 420 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 MGST3O14880 152 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 FOXH1O75593 365 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 SAA2P0DJI9 122 aaPredicted RBP11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 FAM90A1Q86YD7 464 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 NHLRC2Q8NBF2 726 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 OR4X1Q8NH49 305 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 Q8TCH9 128 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 LOXL4Q96JB6 756 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 SMDT1Q9H4I9 107 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 SERTAD4Q9NUC0 356 aa11.31□□□□□ -0.6
PRPF40B-209ENST00000548825 PIGBOS1A0A0B4J2F0 54 aa11.3□□□□□ -0.6
PRPF40B-209ENST00000548825 SCO2A0A1W2PP80 73 aa11.3□□□□□ -0.6
PRPF40B-209ENST00000548825 RAB29O14966 203 aa11.3□□□□□ -0.6
PRPF40B-209ENST00000548825 IGKV1-16P04430 117 aa11.3□□□□□ -0.6
PRPF40B-209ENST00000548825 ZNF114Q8NC26 417 aa11.3□□□□□ -0.6
PRPF40B-209ENST00000548825 POM121Q96HA1 1249 aa11.3□□□□□ -0.6
PRPF40B-209ENST00000548825 GRIFINA4D1Z8 144 aa11.3□□□□□ -0.6
PRPF40B-209ENST00000548825 KBTBD11O94819 623 aa11.3□□□□□ -0.6
PRPF40B-209ENST00000548825 OR10W1Q8NGF6 305 aa11.3□□□□□ -0.6
PRPF40B-209ENST00000548825 MBD3L1Q8WWY6 194 aa11.3□□□□□ -0.6
PRPF40B-209ENST00000548825 SEPSECSQ9HD40 501 aaKnown RBP11.3□□□□□ -0.6
PRPF40B-209ENST00000548825 REG1AP05451 166 aa11.3□□□□□ -0.6
PRPF40B-209ENST00000548825 CD82P27701 267 aa11.3□□□□□ -0.6
PRPF40B-209ENST00000548825 PMS2P11Q13670 270 aa11.3□□□□□ -0.6
PRPF40B-209ENST00000548825 CT45A1Q5HYN5 189 aa11.3□□□□□ -0.6
PRPF40B-209ENST00000548825 CT45A3Q8NHU0 189 aa11.3□□□□□ -0.6
PRPF40B-209ENST00000548825 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.29□□□□□ -0.68e-6■■■■□ 21.9
PRPF40B-209ENST00000548825 TOX4O94842 621 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 HPRT1P00492 218 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 ADH4P08319 380 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 IGFBP2P18065 325 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 LMO1P25800 156 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 PNRC1Q12796 327 aaPredicted RBP11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 DPPA3Q6W0C5 159 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 C1QL4Q86Z23 238 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 IMMP2LQ96T52 175 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 PLEKHA3Q9HB20 300 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 SIRT7Q9NRC8 400 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms