RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 BEST4Q8NFU0 473 aa10.93□□□□□ -0.66
COL2A1-209ENST00000546974 OR2K2Q8NGT1 345 aa10.93□□□□□ -0.66
COL2A1-209ENST00000546974 SLC25A38Q96DW6 304 aa10.93□□□□□ -0.66
COL2A1-209ENST00000546974 CITED4Q96RK1 184 aa10.93□□□□□ -0.66
COL2A1-209ENST00000546974 RNF167Q9H6Y7 350 aa10.93□□□□□ -0.66
COL2A1-209ENST00000546974 TAS2R8Q9NYW2 309 aa10.93□□□□□ -0.66
COL2A1-209ENST00000546974 DNAH1Q9P2D7 4330 aa10.93□□□□□ -0.66
COL2A1-209ENST00000546974 LOC100506127A0A0U1RQW1 187 aa10.92□□□□□ -0.66
COL2A1-209ENST00000546974 HMX3A6NHT5 357 aa10.92□□□□□ -0.66
COL2A1-209ENST00000546974 NPIPB5A8MRT5 1133 aa10.92□□□□□ -0.66
COL2A1-209ENST00000546974 TMEM127O75204 238 aa10.92□□□□□ -0.66
COL2A1-209ENST00000546974 OR2J3O76001 311 aa10.92□□□□□ -0.66
COL2A1-209ENST00000546974 HRASP01112 189 aa10.92□□□□□ -0.66
COL2A1-209ENST00000546974 IL6RP08887 468 aaPredicted RBP10.92□□□□□ -0.66
COL2A1-209ENST00000546974 FCGR2CP31995 323 aa10.92□□□□□ -0.66
COL2A1-209ENST00000546974 RPL27AP46776 148 aaKnown RBP10.92□□□□□ -0.66
COL2A1-209ENST00000546974 C15orf32Q32M92 178 aa10.92□□□□□ -0.66
COL2A1-209ENST00000546974 IDNKQ5T6J7 187 aa10.92□□□□□ -0.66
COL2A1-209ENST00000546974 GTSCR1Q86UQ5 136 aa10.92□□□□□ -0.66
COL2A1-209ENST00000546974 HOGA1Q86XE5 327 aa10.92□□□□□ -0.66
COL2A1-209ENST00000546974 GVQW1Q8N7I0 195 aa10.92□□□□□ -0.66
COL2A1-209ENST00000546974 ZBTB34Q8NCN2 500 aa10.92□□□□□ -0.66
COL2A1-209ENST00000546974 KCTD12Q96CX2 325 aaKnown RBP10.92□□□□□ -0.66
COL2A1-209ENST00000546974 DPPA5A6NC42 116 aa10.91□□□□□ -0.66
COL2A1-209ENST00000546974 E7EUB6 86 aa10.91□□□□□ -0.66
COL2A1-209ENST00000546974 CRYGCP07315 174 aa10.91□□□□□ -0.66
COL2A1-209ENST00000546974 ZNF735P0CB33 412 aa10.91□□□□□ -0.66
COL2A1-209ENST00000546974 OR13F1Q8NGS4 319 aa10.91□□□□□ -0.66
COL2A1-209ENST00000546974 SECTM1Q8WVN6 248 aa10.91□□□□□ -0.66
COL2A1-209ENST00000546974 AIFM2Q9BRQ8 373 aa10.91□□□□□ -0.66
COL2A1-209ENST00000546974 AUNIPQ9H7T9 357 aa10.91□□□□□ -0.66
COL2A1-209ENST00000546974 DIABLOQ9NR28 239 aa10.91□□□□□ -0.66
COL2A1-209ENST00000546974 CCL28Q9NRJ3 127 aa10.91□□□□□ -0.66
COL2A1-209ENST00000546974 SLC2A9Q9NRM0 540 aa10.91□□□□□ -0.66
COL2A1-209ENST00000546974 DMRT1Q9Y5R6 373 aa10.91□□□□□ -0.66
COL2A1-209ENST00000546974 IZUMO1RA6ND01 250 aa10.9□□□□□ -0.66
COL2A1-209ENST00000546974 PPYP01298 95 aa10.9□□□□□ -0.66
COL2A1-209ENST00000546974 LYL1P12980 280 aa10.9□□□□□ -0.66
COL2A1-209ENST00000546974 CBX5P45973 191 aa10.9□□□□□ -0.66
COL2A1-209ENST00000546974 NEDD8Q15843 81 aa10.9□□□□□ -0.66
COL2A1-209ENST00000546974 HAGHQ16775 308 aa10.9□□□□□ -0.66
COL2A1-209ENST00000546974 KLK9Q2XQG4 91 aa10.9□□□□□ -0.66
COL2A1-209ENST00000546974 OR4A5Q8NH83 315 aa10.9□□□□□ -0.66
COL2A1-209ENST00000546974 FYTTD1Q96QD9 318 aaKnown RBP10.9□□□□□ -0.66
COL2A1-209ENST00000546974 GPHA2Q96T91 129 aa10.9□□□□□ -0.66
COL2A1-209ENST00000546974 SPATA25Q9BR10 227 aa10.9□□□□□ -0.66
COL2A1-209ENST00000546974 TUBA4BQ9H853 241 aa10.9□□□□□ -0.66
COL2A1-209ENST00000546974 BET1LQ9NYM9 111 aa10.9□□□□□ -0.66
COL2A1-209ENST00000546974 FBXL7Q9UJT9 491 aa10.9□□□□□ -0.66
COL2A1-209ENST00000546974 KLK9Q9UKQ9 250 aa10.9□□□□□ -0.66
COL2A1-209ENST00000546974 A0A1B0GW64 132 aa10.89□□□□□ -0.67
COL2A1-209ENST00000546974 PPP5D1E7EU14 171 aa10.89□□□□□ -0.67
COL2A1-209ENST00000546974 RBFOX2O43251 390 aaKnown RBP eCLIP10.89□□□□□ -0.67
COL2A1-209ENST00000546974 TNFSF12O43508 249 aa10.89□□□□□ -0.67
COL2A1-209ENST00000546974 GGCTO75223 188 aaKnown RBP10.89□□□□□ -0.67
COL2A1-209ENST00000546974 DHFRP00374 187 aa10.89□□□□□ -0.67
COL2A1-209ENST00000546974 PTHLHP12272 177 aa10.89□□□□□ -0.67
COL2A1-209ENST00000546974 CTRB1P17538 263 aa10.89□□□□□ -0.67
COL2A1-209ENST00000546974 PSMB6P28072 239 aa10.89□□□□□ -0.67
COL2A1-209ENST00000546974 RPL8P62917 257 aaKnown RBP10.89□□□□□ -0.67
COL2A1-209ENST00000546974 KCTD21Q4G0X4 260 aa10.89□□□□□ -0.67
COL2A1-209ENST00000546974 CTRB2Q6GPI1 263 aa10.89□□□□□ -0.67
COL2A1-209ENST00000546974 ADAMTSL5Q6ZMM2 481 aa10.89□□□□□ -0.67
COL2A1-209ENST00000546974 SSX9Q7RTT3 188 aa10.89□□□□□ -0.67
COL2A1-209ENST00000546974 LAX1Q8IWV1 398 aa10.89□□□□□ -0.67
COL2A1-209ENST00000546974 SPAG16Q8N0X2 631 aa10.89□□□□□ -0.67
COL2A1-209ENST00000546974 GIMAP1Q8WWP7 306 aa10.89□□□□□ -0.67
COL2A1-209ENST00000546974 FANCD2OSQ96PS1 177 aa10.89□□□□□ -0.67
COL2A1-209ENST00000546974 SLC5A7Q9GZV3 580 aa10.89□□□□□ -0.67
COL2A1-209ENST00000546974 EDA2RQ9HAV5 297 aa10.89□□□□□ -0.67
COL2A1-209ENST00000546974 TENM2Q9NT68 2774 aa10.88□□□□□ -0.67
COL2A1-209ENST00000546974 LGALS9O00182 355 aa10.88□□□□□ -0.67
COL2A1-209ENST00000546974 NDUFB8O95169 186 aa10.88□□□□□ -0.67
COL2A1-209ENST00000546974 HPRT1P00492 218 aa10.88□□□□□ -0.67
COL2A1-209ENST00000546974 HIST1H1BP16401 226 aaKnown RBP10.88□□□□□ -0.67
COL2A1-209ENST00000546974 HLA-GP17693 338 aa10.88□□□□□ -0.67
COL2A1-209ENST00000546974 TAS2R31P59538 309 aa10.88□□□□□ -0.67
COL2A1-209ENST00000546974 CATR1Q13166 79 aa10.88□□□□□ -0.67
COL2A1-209ENST00000546974 DEFB114Q30KQ6 69 aa10.88□□□□□ -0.67
COL2A1-209ENST00000546974 TIMM50Q3ZCQ8 353 aa10.88□□□□□ -0.67
COL2A1-209ENST00000546974 CD300EQ496F6 205 aaPredicted RBP10.88□□□□□ -0.67
COL2A1-209ENST00000546974 OR4A47Q6IF82 309 aa10.88□□□□□ -0.67
COL2A1-209ENST00000546974 C19orf35Q6ZS72 473 aa10.88□□□□□ -0.67
COL2A1-209ENST00000546974 GPHB5Q86YW7 130 aa10.88□□□□□ -0.67
COL2A1-209ENST00000546974 CROCCP3Q8IVE0 287 aa10.88□□□□□ -0.67
COL2A1-209ENST00000546974 OR5AP2Q8NGF4 316 aa10.88□□□□□ -0.67
COL2A1-209ENST00000546974 DYNLRB2Q8TF09 96 aa10.88□□□□□ -0.67
COL2A1-209ENST00000546974 PALMDQ9NP74 551 aa10.88□□□□□ -0.67
COL2A1-209ENST00000546974 C2orf70A6NJV1 201 aa10.87□□□□□ -0.67
COL2A1-209ENST00000546974 ZNF785A8K8V0 405 aa10.87□□□□□ -0.67
COL2A1-209ENST00000546974 SULT1C2O00338 296 aa10.87□□□□□ -0.67
COL2A1-209ENST00000546974 XRCC3O43542 346 aa10.87□□□□□ -0.67
COL2A1-209ENST00000546974 OR2C1O95371 312 aa10.87□□□□□ -0.67
COL2A1-209ENST00000546974 FOLR2P14207 255 aa10.87□□□□□ -0.67
COL2A1-209ENST00000546974 AREGP15514 252 aa10.87□□□□□ -0.67
COL2A1-209ENST00000546974 NQO2P16083 231 aa10.87□□□□□ -0.67
COL2A1-209ENST00000546974 FXYD4P59646 89 aa10.87□□□□□ -0.67
COL2A1-209ENST00000546974 POU2AF1Q16633 256 aa10.87□□□□□ -0.67
COL2A1-209ENST00000546974 EEF1AKMT3Q96AZ1 226 aa10.87□□□□□ -0.67
COL2A1-209ENST00000546974 ISOC1Q96CN7 298 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms