RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 MED28Q9H204 178 aa13.56□□□□□ -0.24
CADM1-220ENST00000546000 CUBNO60494 3623 aa13.55□□□□□ -0.24
CADM1-220ENST00000546000 C13orf42A0A1B0GVH6 325 aa13.55□□□□□ -0.24
CADM1-220ENST00000546000 RRHO14718 337 aa13.55□□□□□ -0.24
CADM1-220ENST00000546000 NDUFA3O95167 84 aa13.55□□□□□ -0.24
CADM1-220ENST00000546000 SULT1A3P0DMM9 295 aa13.55□□□□□ -0.24
CADM1-220ENST00000546000 SULT1A4P0DMN0 295 aa13.55□□□□□ -0.24
CADM1-220ENST00000546000 AANATQ16613 207 aa13.55□□□□□ -0.24
CADM1-220ENST00000546000 VMA21Q3ZAQ7 101 aa13.55□□□□□ -0.24
CADM1-220ENST00000546000 C10orf55Q5SWW7 151 aa13.55□□□□□ -0.24
CADM1-220ENST00000546000 C11orf87Q6NUJ2 197 aa13.55□□□□□ -0.24
CADM1-220ENST00000546000 H2BFWTQ7Z2G1 175 aa13.55□□□□□ -0.24
CADM1-220ENST00000546000 OR5M8Q8NGP6 311 aa13.55□□□□□ -0.24
CADM1-220ENST00000546000 SSMEM1Q8WWF3 244 aa13.55□□□□□ -0.24
CADM1-220ENST00000546000 RRNAD1Q96FB5 475 aaKnown RBP13.55□□□□□ -0.24
CADM1-220ENST00000546000 CHIAQ9BZP6 476 aa13.55□□□□□ -0.24
CADM1-220ENST00000546000 CACNG5Q9UF02 275 aa13.55□□□□□ -0.24
CADM1-220ENST00000546000 VPREB3Q9UKI3 123 aa13.55□□□□□ -0.24
CADM1-220ENST00000546000 MMP24Q9Y5R2 645 aa13.55□□□□□ -0.24
CADM1-220ENST00000546000 FCN1O00602 326 aa13.54□□□□□ -0.24
CADM1-220ENST00000546000 CRLF1O75462 422 aa13.54□□□□□ -0.24
CADM1-220ENST00000546000 KBTBD11O94819 623 aa13.54□□□□□ -0.24
CADM1-220ENST00000546000 VDAC1P21796 283 aa13.54□□□□□ -0.24
CADM1-220ENST00000546000 H2BFSP57053 126 aa13.54□□□□□ -0.24
CADM1-220ENST00000546000 SRSF2Q01130 221 aaKnown RBP13.54□□□□□ -0.24
CADM1-220ENST00000546000 NPBQ8NG41 125 aa13.54□□□□□ -0.24
CADM1-220ENST00000546000 CHAC2Q8WUX2 184 aa13.54□□□□□ -0.24
CADM1-220ENST00000546000 TAF15Q92804 592 aaKnown RBP eCLIP13.54□□□□□ -0.24
CADM1-220ENST00000546000 LSM10Q969L4 123 aaKnown RBP13.54□□□□□ -0.24
CADM1-220ENST00000546000 RBM14Q96PK6 669 aaKnown RBP13.54□□□□□ -0.24
CADM1-220ENST00000546000 QTRT1Q9BXR0 403 aaKnown RBP13.54□□□□□ -0.24
CADM1-220ENST00000546000 RANBP3Q9H6Z4 567 aaPredicted RBP13.54□□□□□ -0.24
CADM1-220ENST00000546000 RAB18Q9NP72 206 aa13.54□□□□□ -0.24
CADM1-220ENST00000546000 SIGLEC9Q9Y336 463 aa13.54□□□□□ -0.24
CADM1-220ENST00000546000 MOB4Q9Y3A3 225 aa13.54□□□□□ -0.24
CADM1-220ENST00000546000 DUXBA0A1W2PPF3 345 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 C5orf51A6NDU8 294 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 UPK2O00526 184 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 OR2F2O95006 317 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 OR2A4O95047 310 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 SPDEFO95238 335 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 CA2P00918 260 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 AMY1AP04745 511 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 LGALS7P47929 136 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 GNB1P62873 340 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 SSBP2P81877 361 aaPredicted RBP13.53□□□□□ -0.24
CADM1-220ENST00000546000 RELBQ01201 579 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 PLGLAQ15195 96 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 C5orf64Q2M2E5 130 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 SPINK9Q5DT21 86 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 FAM71E2Q8N5Q1 922 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 C5orf56Q8N8D9 126 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 TMEM167AQ8TBQ9 72 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 OR2A7Q96R45 310 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 ZNF430Q9H8G1 570 aaPredicted RBP13.53□□□□□ -0.24
CADM1-220ENST00000546000 BET1LQ9NYM9 111 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 KIAA1456Q9P272 454 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 TMED3Q9Y3Q3 217 aa13.53□□□□□ -0.24
CADM1-220ENST00000546000 BTBD17A6NE02 478 aa13.52□□□□□ -0.25
CADM1-220ENST00000546000 IFNA21P01568 189 aa13.52□□□□□ -0.25
CADM1-220ENST00000546000 OPN1MWP04001 364 aa13.52□□□□□ -0.25
CADM1-220ENST00000546000 IL6RP08887 468 aaPredicted RBP13.52□□□□□ -0.25
CADM1-220ENST00000546000 FAM157CP0CG43 387 aa13.52□□□□□ -0.25
CADM1-220ENST00000546000 OPN1MW2P0DN77 364 aa13.52□□□□□ -0.25
CADM1-220ENST00000546000 OPN1MW3P0DN78 364 aa13.52□□□□□ -0.25
CADM1-220ENST00000546000 BCAP31P51572 246 aa13.52□□□□□ -0.25
CADM1-220ENST00000546000 NDPQ00604 133 aa13.52□□□□□ -0.25
CADM1-220ENST00000546000 IAH1Q2TAA2 248 aaPredicted RBP13.52□□□□□ -0.25
CADM1-220ENST00000546000 ZBTB8BQ8NAP8 495 aaPredicted RBP13.52□□□□□ -0.25
CADM1-220ENST00000546000 OR5R1Q8NH85 324 aa13.52□□□□□ -0.25
CADM1-220ENST00000546000 RNF5Q99942 180 aa13.52□□□□□ -0.25
CADM1-220ENST00000546000 HSPB9Q9BQS6 159 aa13.52□□□□□ -0.25
CADM1-220ENST00000546000 ATG12O94817 140 aa13.51□□□□□ -0.25
CADM1-220ENST00000546000 SMCO1Q147U7 214 aa13.51□□□□□ -0.25
CADM1-220ENST00000546000 PRSS8Q16651 343 aa13.51□□□□□ -0.25
CADM1-220ENST00000546000 GSG1LQ6UXU4 331 aa13.51□□□□□ -0.25
CADM1-220ENST00000546000 RBMS3Q6XE24 437 aaKnown RBP13.51□□□□□ -0.25
CADM1-220ENST00000546000 Q6ZS46 218 aa13.51□□□□□ -0.25
CADM1-220ENST00000546000 TEX45Q8NA69 505 aa13.51□□□□□ -0.25
CADM1-220ENST00000546000 GSKIPQ9P0R6 139 aa13.51□□□□□ -0.25
CADM1-220ENST00000546000 FBN3Q75N90 2809 aa13.51□□□□□ -0.25
CADM1-220ENST00000546000 A0A1B0GW64 132 aa13.5□□□□□ -0.25
CADM1-220ENST00000546000 C15orf61A6NNL5 157 aa13.5□□□□□ -0.25
CADM1-220ENST00000546000 ST8SIA3O43173 380 aa13.5□□□□□ -0.25
CADM1-220ENST00000546000 GPR137BO60478 399 aa13.5□□□□□ -0.25
CADM1-220ENST00000546000 SCGB1D2O95969 90 aa13.5□□□□□ -0.25
CADM1-220ENST00000546000 CD83Q01151 205 aa13.5□□□□□ -0.25
CADM1-220ENST00000546000 TNXAQ16473 311 aa13.5□□□□□ -0.25
CADM1-220ENST00000546000 CXorf66Q5JRM2 361 aaPredicted RBP13.5□□□□□ -0.25
CADM1-220ENST00000546000 THOC7Q6I9Y2 204 aaKnown RBP13.5□□□□□ -0.25
CADM1-220ENST00000546000 PPP1R27Q86WC6 154 aa13.5□□□□□ -0.25
CADM1-220ENST00000546000 OR4D5Q8NGN0 318 aa13.5□□□□□ -0.25
CADM1-220ENST00000546000 OR4A16Q8NH70 328 aa13.5□□□□□ -0.25
CADM1-220ENST00000546000 OR1S1Q8NH92 325 aa13.5□□□□□ -0.25
CADM1-220ENST00000546000 PDCD10Q9BUL8 212 aa13.5□□□□□ -0.25
CADM1-220ENST00000546000 PITPNC1Q9UKF7 332 aa13.5□□□□□ -0.25
CADM1-220ENST00000546000 TET2Q6N021 2002 aaPredicted RBP13.5□□□□□ -0.25
CADM1-220ENST00000546000 HMX3A6NHT5 357 aa13.49□□□□□ -0.25
CADM1-220ENST00000546000 CGB1A6NKQ9 187 aa13.49□□□□□ -0.25
CADM1-220ENST00000546000 E7EUB6 86 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms