RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 MRPL18Q9H0U6 180 aaKnown RBP4.47□□□□□ -1.69
KDM3B-209ENST00000542866 GSX1Q9H4S2 264 aaPredicted RBP4.47□□□□□ -1.69
KDM3B-209ENST00000542866 LRP5LA4QPB2 252 aa4.46□□□□□ -1.69
KDM3B-209ENST00000542866 F2Z2F3 143 aa4.46□□□□□ -1.69
KDM3B-209ENST00000542866 RAMP3O60896 148 aa4.46□□□□□ -1.69
KDM3B-209ENST00000542866 RHBDL1O75783 438 aa4.46□□□□□ -1.69
KDM3B-209ENST00000542866 SYNGR4O95473 234 aa4.46□□□□□ -1.69
KDM3B-209ENST00000542866 IER3P46695 156 aa4.46□□□□□ -1.69
KDM3B-209ENST00000542866 ARF1P84077 181 aaKnown RBP4.46□□□□□ -1.69
KDM3B-209ENST00000542866 ATP6V1FQ16864 119 aa4.46□□□□□ -1.69
KDM3B-209ENST00000542866 WIPI1Q5MNZ9 446 aaPredicted RBP4.46□□□□□ -1.69
KDM3B-209ENST00000542866 TPTE2P1Q5T6R2 138 aa4.46□□□□□ -1.69
KDM3B-209ENST00000542866 OR10D3Q8NH80 312 aa4.46□□□□□ -1.69
KDM3B-209ENST00000542866 C20orf144Q9BQM9 153 aa4.46□□□□□ -1.69
KDM3B-209ENST00000542866 C1QTNF5Q9BXJ0 243 aa4.46□□□□□ -1.69
KDM3B-209ENST00000542866 ZNF462Q96JM2 2506 aa4.46□□□□□ -1.69
KDM3B-209ENST00000542866 MUC3AQ02505 3323 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 PTPN13Q12923 2485 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 COL5A1P20908 1838 aaPredicted RBP4.46□□□□□ -1.7
KDM3B-209ENST00000542866 FAM166BA8MTA8 275 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 AQP7O14520 342 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 PDE6DO43924 150 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 IGLV2-14P01704 120 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 STAG3L3P0CL85 134 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 FOXL1Q12952 345 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 OR1L6Q8NGR2 347 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 ZNF71Q9NQZ8 489 aaPredicted RBP4.46□□□□□ -1.7
KDM3B-209ENST00000542866 RAXQ9Y2V3 346 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 ODAMA1E959 279 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 ZNF716A6NP11 495 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 ANKRD30BLA7E2S9 258 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 SNURFLB1AK76 121 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 DIRC3C9JPN6 131 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 MLNRO43193 412 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 MRPL33O75394 65 aaKnown RBP4.46□□□□□ -1.7
KDM3B-209ENST00000542866 PMCHP20382 165 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 CA6P23280 308 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 PTTG1IPP53801 180 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 UBE2NP61088 152 aaKnown RBP4.46□□□□□ -1.7
KDM3B-209ENST00000542866 SUMO1P63165 101 aaKnown RBP4.46□□□□□ -1.7
KDM3B-209ENST00000542866 KIAA1644Q3SXP7 199 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 FAM53AQ6NSI3 398 aaPredicted RBP4.46□□□□□ -1.7
KDM3B-209ENST00000542866 TEX43Q6ZNM6 134 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 TMEM144Q7Z5S9 345 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 MRPL52Q86TS9 123 aaKnown RBP4.46□□□□□ -1.7
KDM3B-209ENST00000542866 OCC1Q8TAD7 63 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 PRDM14Q9GZV8 571 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 PROK2Q9HC23 129 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.46□□□□□ -1.7
KDM3B-209ENST00000542866 TP53TG3Q9ULZ0 132 aa4.46□□□□□ -1.7
KDM3B-209ENST00000542866 CACNA1DQ01668 2161 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 A0A0G2JMM0 328 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 SCO2A0A1W2PP80 73 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 A0A1W2PPB8 328 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 A0A1W2PRS3 328 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 C20orf202A1L168 122 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 KIR3DP1A8MWS1 328 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 IL6RP08887 468 aaPredicted RBP4.45□□□□□ -1.7
KDM3B-209ENST00000542866 WNT2P09544 360 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 FRMD6-AS1P0C7T7 363 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 FOXG1P55316 489 aaPredicted RBP4.45□□□□□ -1.7
KDM3B-209ENST00000542866 SLC35B1P78383 322 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 SPATA45Q537H7 98 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 ZNF766Q5HY98 468 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 SPATA46Q5T0L3 261 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 SPINK14Q6IE38 97 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 Q6ZN92 141 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 SPACA3Q8IXA5 215 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 SAXO1Q8IYX7 474 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 SPSB4Q96A44 273 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 OR2D2Q9H210 308 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 IL19Q9UHD0 177 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 WIPI2Q9Y4P8 454 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 EXPH5Q8NEV8 1989 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 LOC102723996A0A087X1L8 192 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 LRRC30A6NM36 301 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 RNF212BA8MTL3 300 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 S1PR2O95136 353 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 RFPL3SP0C7P2 107 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 AMTP48728 403 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 LHX2P50458 406 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 LINC00205P59089 165 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 RBPJQ06330 500 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 PDLIM3Q53GG5 364 aaPredicted RBP4.45□□□□□ -1.7
KDM3B-209ENST00000542866 H2BFWTQ7Z2G1 175 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 APOBEC3DQ96AK3 386 aaPredicted RBP4.45□□□□□ -1.7
KDM3B-209ENST00000542866 STARD4Q96DR4 205 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 SLC35E1Q96K37 410 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 IMMP1LQ96LU5 166 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 FAM173AQ9BQD7 235 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 ZNF586Q9NXT0 402 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 ZFP30Q9Y2G7 519 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 TRBV20OR9-2A0A075B6H5 130 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 FAM90A26D6RGX4 464 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 SH2D1BO14796 132 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 TM4SF5O14894 197 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 OR5G3P0C626 314 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 ARL14EPLP0DKL9 152 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 CD99P14209 185 aa4.45□□□□□ -1.7
KDM3B-209ENST00000542866 HNRNPA3P51991 378 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms