RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 C10orf99Q6UWK7 81 aa10.64□□□□□ -0.71
RPAIN-205ENST00000536255 ZNF329Q86UD4 541 aa10.64□□□□□ -0.71
RPAIN-205ENST00000536255 DMBX1Q8NFW5 382 aa10.64□□□□□ -0.71
RPAIN-205ENST00000536255 OR4A5Q8NH83 315 aa10.64□□□□□ -0.71
RPAIN-205ENST00000536255 ARPC1AQ92747 370 aa10.64□□□□□ -0.71
RPAIN-205ENST00000536255 SDHCQ99643 169 aaPredicted RBP10.64□□□□□ -0.71
RPAIN-205ENST00000536255 CCDC32Q9BV29 185 aa10.64□□□□□ -0.71
RPAIN-205ENST00000536255 WDR12Q9GZL7 423 aaKnown RBP10.64□□□□□ -0.71
RPAIN-205ENST00000536255 TPSG1Q9NRR2 321 aa10.64□□□□□ -0.71
RPAIN-205ENST00000536255 BET1LQ9NYM9 111 aa10.64□□□□□ -0.71
RPAIN-205ENST00000536255 MEGF8Q7Z7M0 2845 aa10.63□□□□□ -0.71
RPAIN-205ENST00000536255 TRAV41A0A0B4J266 112 aa10.63□□□□□ -0.71
RPAIN-205ENST00000536255 H0Y980 276 aa10.63□□□□□ -0.71
RPAIN-205ENST00000536255 S1PR2O95136 353 aa10.63□□□□□ -0.71
RPAIN-205ENST00000536255 IL7P13232 177 aa10.63□□□□□ -0.71
RPAIN-205ENST00000536255 MAS1LP35410 378 aa10.63□□□□□ -0.71
RPAIN-205ENST00000536255 LPAR6P43657 344 aa10.63□□□□□ -0.71
RPAIN-205ENST00000536255 CRIP2P52943 208 aaPredicted RBP10.63□□□□□ -0.71
RPAIN-205ENST00000536255 TNXAQ16473 311 aa10.63□□□□□ -0.71
RPAIN-205ENST00000536255 SSX9Q7RTT3 188 aa10.63□□□□□ -0.71
RPAIN-205ENST00000536255 VKORC1L1Q8N0U8 176 aa10.63□□□□□ -0.71
RPAIN-205ENST00000536255 PUSL1Q8N0Z8 303 aaKnown RBP10.63□□□□□ -0.71
RPAIN-205ENST00000536255 GRPEL2Q8TAA5 225 aa10.63□□□□□ -0.71
RPAIN-205ENST00000536255 TMEM167AQ8TBQ9 72 aa10.63□□□□□ -0.71
RPAIN-205ENST00000536255 MRGPRFQ96AM1 343 aa10.63□□□□□ -0.71
RPAIN-205ENST00000536255 R3HDM4Q96D70 268 aa10.63□□□□□ -0.71
RPAIN-205ENST00000536255 TMEM68Q96MH6 324 aa10.63□□□□□ -0.71
RPAIN-205ENST00000536255 SLC25A21Q9BQT8 299 aaPredicted RBP10.63□□□□□ -0.71
RPAIN-205ENST00000536255 C7orf50Q9BRJ6 194 aaKnown RBP10.63□□□□□ -0.71
RPAIN-205ENST00000536255 GPR132Q9UNW8 380 aa10.63□□□□□ -0.71
RPAIN-205ENST00000536255 TEX13DA0A0J9YY54 714 aaPredicted RBP10.62□□□□□ -0.71
RPAIN-205ENST00000536255 C3orf85A0A1B0GTC6 90 aa10.62□□□□□ -0.71
RPAIN-205ENST00000536255 A0A1W2PRX2 142 aa10.62□□□□□ -0.71
RPAIN-205ENST00000536255 TCRBV4S1A1TA0A5B7 111 aa10.62□□□□□ -0.71
RPAIN-205ENST00000536255 MARCH11A6NNE9 402 aa10.62□□□□□ -0.71
RPAIN-205ENST00000536255 ATG12O94817 140 aa10.62□□□□□ -0.71
RPAIN-205ENST00000536255 ELANEP08246 267 aa10.62□□□□□ -0.71
RPAIN-205ENST00000536255 CD40LGP29965 261 aa10.62□□□□□ -0.71
RPAIN-205ENST00000536255 NDPQ00604 133 aa10.62□□□□□ -0.71
RPAIN-205ENST00000536255 PJVKQ0ZLH3 352 aa10.62□□□□□ -0.71
RPAIN-205ENST00000536255 FOXE3Q13461 319 aa10.62□□□□□ -0.71
RPAIN-205ENST00000536255 ECSCRQ19T08 205 aa10.62□□□□□ -0.71
RPAIN-205ENST00000536255 AKIRIN2Q53H80 203 aa10.62□□□□□ -0.71
RPAIN-205ENST00000536255 CXorf66Q5JRM2 361 aaPredicted RBP10.62□□□□□ -0.71
RPAIN-205ENST00000536255 OR4A47Q6IF82 309 aa10.62□□□□□ -0.71
RPAIN-205ENST00000536255 CADM3Q8N126 398 aa10.62□□□□□ -0.71
RPAIN-205ENST00000536255 OR4F17Q8NGA8 305 aa10.62□□□□□ -0.71
RPAIN-205ENST00000536255 OR4F4Q96R69 305 aa10.62□□□□□ -0.71
RPAIN-205ENST00000536255 RTBDNQ9BSG5 229 aaPredicted RBP10.62□□□□□ -0.71
RPAIN-205ENST00000536255 C5orf66Q9H5L9 145 aa10.62□□□□□ -0.71
RPAIN-205ENST00000536255 ZNF430Q9H8G1 570 aaPredicted RBP10.62□□□□□ -0.71
RPAIN-205ENST00000536255 TSSC4Q9Y5U2 329 aaPredicted RBP10.62□□□□□ -0.71
RPAIN-205ENST00000536255 WSB1Q9Y6I7 421 aa10.62□□□□□ -0.71
RPAIN-205ENST00000536255 G3V318 75 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 ARPC1BO15143 372 aaKnown RBP10.61□□□□□ -0.71
RPAIN-205ENST00000536255 KRASP01116 189 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 IGHG4P01861 327 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 FGF2P09038 288 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 RPL8P62917 257 aaKnown RBP10.61□□□□□ -0.71
RPAIN-205ENST00000536255 CFHR3Q02985 330 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 ZNF846Q147U1 533 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 RBMS2Q15434 407 aaKnown RBP10.61□□□□□ -0.71
RPAIN-205ENST00000536255 ZNF585BQ52M93 769 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 KHDC1LQ5JSQ8 128 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 UNQ5815/PRO19632Q6UWF5 114 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 SGPP2Q8IWX5 399 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 TSC22D3Q99576 134 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 PHB2Q99623 299 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 SPIN2AQ99865 258 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 SPIN2BQ9BPZ2 258 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 NAA60Q9H7X0 242 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 ZFP57Q9NU63 452 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 TMEM140Q9NV12 185 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 FOXA2Q9Y261 457 aaPredicted RBP10.61□□□□□ -0.71
RPAIN-205ENST00000536255 KCNIP3Q9Y2W7 256 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 NUBP2Q9Y5Y2 271 aa10.61□□□□□ -0.71
RPAIN-205ENST00000536255 CRYM-AS1A6NIL9 109 aa10.6□□□□□ -0.71
RPAIN-205ENST00000536255 PPIFP30405 207 aaKnown RBP10.6□□□□□ -0.71
RPAIN-205ENST00000536255 DHODHQ02127 395 aa10.6□□□□□ -0.71
RPAIN-205ENST00000536255 TRIM16LQ309B1 348 aa10.6□□□□□ -0.71
RPAIN-205ENST00000536255 TMEM65Q6PI78 240 aa10.6□□□□□ -0.71
RPAIN-205ENST00000536255 MINDY2Q8NBR6 621 aa10.6□□□□□ -0.71
RPAIN-205ENST00000536255 LFNGQ8NES3 379 aa10.6□□□□□ -0.71
RPAIN-205ENST00000536255 OR5M8Q8NGP6 311 aa10.6□□□□□ -0.71
RPAIN-205ENST00000536255 SRSF12Q8WXF0 261 aaKnown RBP10.6□□□□□ -0.71
RPAIN-205ENST00000536255 FAM103A1Q9BTL3 118 aaKnown RBP10.6□□□□□ -0.71
RPAIN-205ENST00000536255 VSIG4Q9Y279 399 aa10.6□□□□□ -0.71
RPAIN-205ENST00000536255 FBXO7Q9Y3I1 522 aa10.6□□□□□ -0.71
RPAIN-205ENST00000536255 PIGBOS1A0A0B4J2F0 54 aa10.59□□□□□ -0.71
RPAIN-205ENST00000536255 LINC00854A0A1B0GVQ3 168 aa10.59□□□□□ -0.71
RPAIN-205ENST00000536255 A0A1W2PN81 502 aa10.59□□□□□ -0.71
RPAIN-205ENST00000536255 UPK2O00526 184 aa10.59□□□□□ -0.71
RPAIN-205ENST00000536255 PLXNB1O43157 2135 aa10.59□□□□□ -0.71
RPAIN-205ENST00000536255 SNAPC5O75971 98 aa10.59□□□□□ -0.71
RPAIN-205ENST00000536255 EGR2P11161 476 aaPredicted RBP10.59□□□□□ -0.71
RPAIN-205ENST00000536255 HLA-GP17693 338 aa10.59□□□□□ -0.71
RPAIN-205ENST00000536255 UCP1P25874 307 aa10.59□□□□□ -0.71
RPAIN-205ENST00000536255 G6PCP35575 357 aa10.59□□□□□ -0.71
RPAIN-205ENST00000536255 CHRNA7P36544 502 aa10.59□□□□□ -0.71
RPAIN-205ENST00000536255 RPL27AP46776 148 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms