RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 CNIH1O95406 144 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 IGLV1-40P01703 118 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 SAA1P0DJI8 122 aaPredicted RBP9.54□□□□□ -0.88
SF3B2-213ENST00000533421 APELAP0DMC3 54 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 MYOD1P15172 320 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 RAB9AP51151 201 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 SSBP1Q04837 148 aaKnown RBP9.54□□□□□ -0.88
SF3B2-213ENST00000533421 MRGPRG-AS1Q2M3A8 158 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 VMA21Q3ZAQ7 101 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 AKIRIN2Q53H80 203 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 C9orf66Q5T8R8 295 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 UNQ5815/PRO19632Q6UWF5 114 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 ZNF66Q6ZN08 573 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 TBC1D26Q86UD7 250 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 PPP1R27Q86WC6 154 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 ARRDC1Q8N5I2 433 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 MINDY2Q8NBR6 621 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 CASTOR1Q8WTX7 329 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 ARPC1AQ92747 370 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 RAX2Q96IS3 184 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 TMEM68Q96MH6 324 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 SLA2Q9H6Q3 261 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 HRASLSQ9HDD0 168 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 AKIP1Q9NQ31 210 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 BATF3Q9NR55 127 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 AURKAIP1Q9NWT8 199 aaPredicted RBP9.54□□□□□ -0.88
SF3B2-213ENST00000533421 RABL2AQ9UBK7 228 aaPredicted RBP9.54□□□□□ -0.88
SF3B2-213ENST00000533421 RABL2BQ9UNT1 228 aa9.54□□□□□ -0.88
SF3B2-213ENST00000533421 NOTCH3Q9UM47 2321 aa9.53□□□□□ -0.88
SF3B2-213ENST00000533421 ARPC1BO15143 372 aaKnown RBP9.53□□□□□ -0.88
SF3B2-213ENST00000533421 CRYGBP07316 175 aa9.53□□□□□ -0.88
SF3B2-213ENST00000533421 TBPP20226 339 aa9.53□□□□□ -0.88
SF3B2-213ENST00000533421 SSBP2P81877 361 aaPredicted RBP9.53□□□□□ -0.88
SF3B2-213ENST00000533421 RUNX1Q01196 453 aa9.53□□□□□ -0.88
SF3B2-213ENST00000533421 ZNF616Q08AN1 781 aa9.53□□□□□ -0.88
SF3B2-213ENST00000533421 MEF2DQ14814 521 aa9.53□□□□□ -0.88
SF3B2-213ENST00000533421 C10orf55Q5SWW7 151 aa9.53□□□□□ -0.88
SF3B2-213ENST00000533421 C18orf65Q6ZTR6 163 aa9.53□□□□□ -0.88
SF3B2-213ENST00000533421 SLC38A6Q8IZM9 456 aa9.53□□□□□ -0.88
SF3B2-213ENST00000533421 TOMM5Q8N4H5 51 aa9.53□□□□□ -0.88
SF3B2-213ENST00000533421 ZNF491Q8N8L2 437 aa9.53□□□□□ -0.88
SF3B2-213ENST00000533421 OR4S2Q8NH73 311 aa9.53□□□□□ -0.88
SF3B2-213ENST00000533421 TERB2Q8NHR7 220 aa9.53□□□□□ -0.88
SF3B2-213ENST00000533421 GRPEL2Q8TAA5 225 aa9.53□□□□□ -0.88
SF3B2-213ENST00000533421 OSR1Q8TAX0 266 aaPredicted RBP9.53□□□□□ -0.88
SF3B2-213ENST00000533421 MYOZ3Q8TDC0 251 aa9.53□□□□□ -0.88
SF3B2-213ENST00000533421 SLC2A9Q9NRM0 540 aa9.53□□□□□ -0.88
SF3B2-213ENST00000533421 PTTG2Q9NZH5 202 aa9.53□□□□□ -0.88
SF3B2-213ENST00000533421 NUBP2Q9Y5Y2 271 aa9.53□□□□□ -0.88
SF3B2-213ENST00000533421 TRAV3A0A0B4J244 114 aa9.52□□□□□ -0.89
SF3B2-213ENST00000533421 H3BUA1 57 aa9.52□□□□□ -0.89
SF3B2-213ENST00000533421 PTBP1P26599 531 aaKnown RBP eCLIP9.52□□□□□ -0.89
SF3B2-213ENST00000533421 LPAR6P43657 344 aa9.52□□□□□ -0.89
SF3B2-213ENST00000533421 INSL3P51460 131 aa9.52□□□□□ -0.89
SF3B2-213ENST00000533421 CCR6P51684 374 aa9.52□□□□□ -0.89
SF3B2-213ENST00000533421 PIGPP57054 158 aa9.52□□□□□ -0.89
SF3B2-213ENST00000533421 EGFEM1PQ0D2K5 195 aa9.52□□□□□ -0.89
SF3B2-213ENST00000533421 CATR1Q13166 79 aa9.52□□□□□ -0.89
SF3B2-213ENST00000533421 FXYD3Q14802 87 aa9.52□□□□□ -0.89
SF3B2-213ENST00000533421 MSMO1Q15800 293 aa9.52□□□□□ -0.89
SF3B2-213ENST00000533421 SP6Q3SY56 376 aa9.52□□□□□ -0.89
SF3B2-213ENST00000533421 TRIQKQ629K1 86 aa9.52□□□□□ -0.89
SF3B2-213ENST00000533421 CMTM1Q8IZ96 169 aa9.52□□□□□ -0.89
SF3B2-213ENST00000533421 TEX45Q8NA69 505 aa9.52□□□□□ -0.89
SF3B2-213ENST00000533421 ZBTB34Q8NCN2 500 aa9.52□□□□□ -0.89
SF3B2-213ENST00000533421 ADAD2Q8NCV1 583 aaKnown RBP9.52□□□□□ -0.89
SF3B2-213ENST00000533421 OR11H1Q8NG94 326 aa9.52□□□□□ -0.89
SF3B2-213ENST00000533421 BORCS5Q969J3 196 aa9.52□□□□□ -0.89
SF3B2-213ENST00000533421 PRR13Q9NZ81 148 aa9.52□□□□□ -0.89
SF3B2-213ENST00000533421 A0A0G2JLM5 398 aa9.51□□□□□ -0.89
SF3B2-213ENST00000533421 ACTL6BO94805 426 aa9.51□□□□□ -0.89
SF3B2-213ENST00000533421 PRB2P02812 416 aaPredicted RBP9.51□□□□□ -0.89
SF3B2-213ENST00000533421 EGR2P11161 476 aaPredicted RBP9.51□□□□□ -0.89
SF3B2-213ENST00000533421 IL7P13232 177 aa9.51□□□□□ -0.89
SF3B2-213ENST00000533421 INPP1P49441 399 aa9.51□□□□□ -0.89
SF3B2-213ENST00000533421 UCP3P55916 312 aa9.51□□□□□ -0.89
SF3B2-213ENST00000533421 UBE2KP61086 200 aa9.51□□□□□ -0.89
SF3B2-213ENST00000533421 FHL3Q13643 280 aa9.51□□□□□ -0.89
SF3B2-213ENST00000533421 TNXAQ16473 311 aa9.51□□□□□ -0.89
SF3B2-213ENST00000533421 DEFB136Q30KP8 78 aa9.51□□□□□ -0.89
SF3B2-213ENST00000533421 ZNF585BQ52M93 769 aa9.51□□□□□ -0.89
SF3B2-213ENST00000533421 GDPD1Q8N9F7 314 aa9.51□□□□□ -0.89
SF3B2-213ENST00000533421 LFNGQ8NES3 379 aa9.51□□□□□ -0.89
SF3B2-213ENST00000533421 OR1N2Q8NGR9 330 aa9.51□□□□□ -0.89
SF3B2-213ENST00000533421 VSTM2AQ8TAG5 236 aa9.51□□□□□ -0.89
SF3B2-213ENST00000533421 DUX3Q96PT4 197 aa9.51□□□□□ -0.89
SF3B2-213ENST00000533421 TP53RKQ96S44 253 aa9.51□□□□□ -0.89
SF3B2-213ENST00000533421 AIFM2Q9BRQ8 373 aa9.51□□□□□ -0.89
SF3B2-213ENST00000533421 RTBDNQ9BSG5 229 aaPredicted RBP9.51□□□□□ -0.89
SF3B2-213ENST00000533421 ZNF430Q9H8G1 570 aaPredicted RBP9.51□□□□□ -0.89
SF3B2-213ENST00000533421 ZNF355PQ9NSJ1 428 aa9.51□□□□□ -0.89
SF3B2-213ENST00000533421 TNCP24821 2201 aa9.5□□□□□ -0.89
SF3B2-213ENST00000533421 I3L521 148 aa9.5□□□□□ -0.89
SF3B2-213ENST00000533421 MPPED1O15442 326 aa9.5□□□□□ -0.89
SF3B2-213ENST00000533421 IGKV1-39P01597 117 aa9.5□□□□□ -0.89
SF3B2-213ENST00000533421 IGKV1D-39P04432 117 aa9.5□□□□□ -0.89
SF3B2-213ENST00000533421 F2RP25116 425 aa9.5□□□□□ -0.89
SF3B2-213ENST00000533421 G6PCP35575 357 aa9.5□□□□□ -0.89
SF3B2-213ENST00000533421 KIR2DS2P43631 304 aa9.5□□□□□ -0.89
SF3B2-213ENST00000533421 TPPP2P59282 170 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms