RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 F5H5K5 113 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 CATP04040 527 aaKnown RBP3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 SRP19P09132 144 aaKnown RBP3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 LINC00869P0C866 280 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 FABP2P12104 132 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 SRIP30626 198 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 TIA1P31483 386 aaKnown RBP eCLIP3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 HRH1P35367 487 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 TNFRSF4P43489 277 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 GALR1P47211 349 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 RGRP47804 291 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 GZMMP51124 257 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 FABP6P51161 128 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 SLC25A1P53007 311 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 EMP1P54849 157 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 MPV17LQ2QL34 196 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 PRR30Q53SZ7 412 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 MS4A13Q5J8X5 152 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 BVES-AS1Q5T3Y7 98 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 PLPP4Q5VZY2 271 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 TMEM211Q6ICI0 200 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 FBXL22Q6P050 247 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 Q6Q795 121 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 Q6ZS92 163 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 TMEM25Q86YD3 366 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 ZNF595Q8IYB9 648 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 SAXO1Q8IYX7 474 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 C8orf31Q8N9H6 132 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 OR2M3Q8NG83 312 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 OR51A4Q8NGJ6 313 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 OR4C16Q8NGL9 310 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 OR5AR1Q8NGP9 310 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 OR2T10Q8NGZ9 312 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 OR10D3Q8NH80 312 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 OR1L3Q8NH93 324 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 VSTM2AQ8TAG5 236 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 C8orf46Q8TAG6 207 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 C8orf44Q96CB5 159 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 FLYWCH2Q96CP2 140 aaKnown RBP3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 SNRNP40Q96DI7 357 aaKnown RBP3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 ATXN7L3BQ96GX2 97 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 C17orf77Q96MU5 243 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 TSSK2Q96PF2 358 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 SCGB3A2Q96PL1 93 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 DERL3Q96Q80 235 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 NRTNQ99748 197 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 TMEM133Q9H2Q1 129 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 PPDPFQ9H3Y8 114 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 OR5V1Q9UGF6 321 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 ZNF443Q9Y2A4 671 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 LSM5Q9Y4Y9 91 aaKnown RBP3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 IER3IP1Q9Y5U9 82 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 HEBP2Q9Y5Z4 205 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 TRIP11Q15643 1979 aa3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 ZNF106Q9H2Y7 1883 aaKnown RBP3.81□□□□□ -1.8
HMGB3P13-201ENST00000511263 TRBV4-1A0A0J9YWV2 114 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 TEX48A0A1B0GUV7 120 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 A0A1W2PPV9 198 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 A0A1W2PRF3 423 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 A0A1W2PRM7 423 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 TSPAN11A1L157 253 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 ANTXRLA6NF34 631 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 OR4C45A6NMZ5 311 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 ZNF850A8MQ14 1090 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 ZNF736B4DX44 427 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 HCRTO43612 131 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 OR1I1O60431 355 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 TBL1XO60907 577 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 OR2J3O76001 311 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 OR7C1O76099 320 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 PFN1P07737 140 aaKnown RBP3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 PVRP15151 417 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 ORM2P19652 201 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 S100A3P33764 101 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 CA7P43166 264 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 GPR1P46091 355 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 REG1BP48304 166 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 ZNF83P51522 516 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 MTCP1P56278 107 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 YPEL3P61236 119 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 EWSR1Q01844 656 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 MZT1Q08AG7 82 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 ZNF415Q09FC8 603 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 GGTLC2Q14390 218 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 MRPL23Q16540 153 aaKnown RBP3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 CDO1Q16878 200 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 ZNF876PQ49A33 203 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 FAM106AQ4KMX7 169 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 SYT14P1Q58G82 188 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 WDR38Q5JTN6 314 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 TMEM215Q68D42 235 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 PWWP2BQ6NUJ5 590 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 SLC25A34Q6PIV7 304 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 ZNF322Q6U7Q0 402 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 SLC25A42Q86VD7 318 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 ZIC4Q8N9L1 334 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 TMEM229BQ8NBD8 167 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 OR4F17Q8NGA8 305 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 OR8B12Q8NGG6 310 aa3.8□□□□□ -1.8
HMGB3P13-201ENST00000511263 OR6T1Q8NGN1 323 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms