RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 AK6Q9Y3D8 172 aaKnown RBP3.9□□□□□ -1.79
NIPBL-205ENST00000505998 ORC6Q9Y5N6 252 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 APCP25054 2843 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 CENPEQ02224 2701 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 FBN2P35556 2912 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 ABCA12Q86UK0 2595 aa3.9□□□□□ -1.79
NIPBL-205ENST00000505998 UTP20O75691 2785 aaKnown RBP3.89□□□□□ -1.79
NIPBL-205ENST00000505998 DSCAMO60469 2012 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 TRAV26-1A0A087WT03 109 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 A0A1W2PPV4 95 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 FAM183AA6NL82 134 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 H7C1C5 153 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 ATG12O94817 140 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 UBL3O95164 117 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 GABARAPO95166 117 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 IFNA21P01568 189 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 IGHG4P01861 327 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 HTR1AP08908 422 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 ADRA2AP08913 450 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 CRHBPP24387 322 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 SLC6A1P30531 599 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 FGF9P31371 208 aaPredicted RBP3.89□□□□□ -1.79
NIPBL-205ENST00000505998 KCNJ3P48549 501 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 GABARAPL2P60520 117 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 LCN6P62502 163 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 RSPO1Q2MKA7 263 aaPredicted RBP3.89□□□□□ -1.79
NIPBL-205ENST00000505998 PRAMEF5Q5TYX0 476 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 PRAMEF6Q5VXH4 476 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 CARD17Q5XLA6 110 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 LAMTOR1Q6IAA8 161 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 KCNIP4Q6PIL6 250 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 ZNF100Q8IYN0 542 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 FAM58AQ8N1B3 248 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 SYS1Q8N2H4 156 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 SLC22A24Q8N4F4 322 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 CNEP1R1Q8N9A8 125 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 CYB561A3Q8NBI2 242 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 HSD17B11Q8NBQ5 300 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 ZNF555Q8NEP9 628 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 OR51G2Q8NGK0 314 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 HAVCR2Q8TDQ0 301 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 CYGBQ8WWM9 190 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 C11orf40Q8WZ69 217 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 RAB1CQ92928 201 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 CREB3L1Q96BA8 519 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 IL4I1Q96RQ9 567 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 CDCA4Q9BXL8 241 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 KCNJ16Q9NPI9 418 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 INPP5EQ9NRR6 644 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 GNG8Q9UK08 70 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 PSG11Q9UQ72 335 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 ITPR2Q14571 2701 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 ANKRD17O75179 2603 aaKnown RBP3.89□□□□□ -1.79
NIPBL-205ENST00000505998 HECTD1Q9ULT8 2610 aa3.89□□□□□ -1.79
NIPBL-205ENST00000505998 SPG11Q96JI7 2443 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 IGHV1OR15-1A0A075B7D0 117 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 IRGMA1A4Y4 181 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 HELTA6NFD8 242 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 ZNF705EA8MWA4 302 aaPredicted RBP3.88□□□□□ -1.79
NIPBL-205ENST00000505998 DEFB108AA8MXU0 73 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 M0R129 80 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 M0R143 59 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 SLC16A7O60669 478 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 HPGDSO60760 199 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 RAMP3O60896 148 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 ENTPD6O75354 484 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 LYZL6O75951 148 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 CLIC3O95833 236 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 CYB5R3P00387 301 aaPredicted RBP3.88□□□□□ -1.79
NIPBL-205ENST00000505998 LIMS3P0CW19 117 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 LIMS4P0CW20 117 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 ZNF35P13682 527 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 ZNF32P17041 273 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 RPL13AP40429 203 aaKnown RBP3.88□□□□□ -1.79
NIPBL-205ENST00000505998 MAP2K4P45985 399 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 RORCP51449 518 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 EFNB2P52799 333 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 WNT4P56705 351 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 KLF3P57682 345 aaPredicted RBP3.88□□□□□ -1.79
NIPBL-205ENST00000505998 PCBD1P61457 104 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 ATP6V1FQ16864 119 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 SLC36A2Q495M3 483 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 TGIF2LYQ8IUE0 185 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 C1orf174Q8IYL3 243 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 YIPF7Q8N8F6 280 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 OR9Q1Q8NGQ5 310 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 OR13D1Q8NGV5 346 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 OR6N1Q8NGY5 312 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 OR2T27Q8NH04 317 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 TERB2Q8NHR7 220 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 DYNC2LI1Q8TCX1 351 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 CNN2Q99439 309 aaKnown RBP3.88□□□□□ -1.79
NIPBL-205ENST00000505998 PHB2Q99623 299 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 CMSS1Q9BQ75 279 aaKnown RBP3.88□□□□□ -1.79
NIPBL-205ENST00000505998 CHIAQ9BZP6 476 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 OR2H1Q9GZK4 316 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 NAA50Q9GZZ1 169 aaKnown RBP3.88□□□□□ -1.79
NIPBL-205ENST00000505998 CLN6Q9NWW5 311 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 TVP23BQ9NYZ1 205 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 SIGLEC8Q9NYZ4 499 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms