RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 BMPR1BO00238 502 aa9.61□□□□□ -0.87
HSPG2-212ENST00000493940 HPGDSO60760 199 aa9.61□□□□□ -0.87
HSPG2-212ENST00000493940 OR2A4O95047 310 aa9.61□□□□□ -0.87
HSPG2-212ENST00000493940 ZNF735P0CB33 412 aa9.61□□□□□ -0.87
HSPG2-212ENST00000493940 GP9P14770 177 aa9.61□□□□□ -0.87
HSPG2-212ENST00000493940 RPA2P15927 270 aa9.61□□□□□ -0.87
HSPG2-212ENST00000493940 ELK1P19419 428 aa9.61□□□□□ -0.87
HSPG2-212ENST00000493940 CD40LGP29965 261 aa9.61□□□□□ -0.87
HSPG2-212ENST00000493940 SYNJ2BPP57105 145 aa9.61□□□□□ -0.87
HSPG2-212ENST00000493940 RHOGP84095 191 aa9.61□□□□□ -0.87
HSPG2-212ENST00000493940 CTF1Q16619 201 aa9.61□□□□□ -0.87
HSPG2-212ENST00000493940 TMEM17Q86X19 198 aa9.61□□□□□ -0.87
HSPG2-212ENST00000493940 SPAG16Q8N0X2 631 aa9.61□□□□□ -0.87
HSPG2-212ENST00000493940 OR4S2Q8NH73 311 aa9.61□□□□□ -0.87
HSPG2-212ENST00000493940 OR2A7Q96R45 310 aa9.61□□□□□ -0.87
HSPG2-212ENST00000493940 PEF1Q9UBV8 284 aaKnown RBP9.61□□□□□ -0.87
HSPG2-212ENST00000493940 S4R3C0 116 aa9.61□□□□□ -0.87
HSPG2-212ENST00000493940 A0A0G2JLM5 398 aa9.6□□□□□ -0.87
HSPG2-212ENST00000493940 TMEM127O75204 238 aa9.6□□□□□ -0.87
HSPG2-212ENST00000493940 OR2J3O76001 311 aa9.6□□□□□ -0.87
HSPG2-212ENST00000493940 NDUFB8O95169 186 aa9.6□□□□□ -0.87
HSPG2-212ENST00000493940 IGLV1-51P01701 117 aa9.6□□□□□ -0.87
HSPG2-212ENST00000493940 IGHV3-23P01764 117 aa9.6□□□□□ -0.87
HSPG2-212ENST00000493940 HLA-AP01891 365 aaKnown RBP9.6□□□□□ -0.87
HSPG2-212ENST00000493940 REG1AP05451 166 aa9.6□□□□□ -0.87
HSPG2-212ENST00000493940 CSN3P07498 182 aa9.6□□□□□ -0.87
HSPG2-212ENST00000493940 CBX5P45973 191 aa9.6□□□□□ -0.87
HSPG2-212ENST00000493940 MSMO1Q15800 293 aa9.6□□□□□ -0.87
HSPG2-212ENST00000493940 TMEM69Q5SWH9 247 aa9.6□□□□□ -0.87
HSPG2-212ENST00000493940 OR4A47Q6IF82 309 aa9.6□□□□□ -0.87
HSPG2-212ENST00000493940 CROCCP3Q8IVE0 287 aa9.6□□□□□ -0.87
HSPG2-212ENST00000493940 SBSPONQ8IVN8 264 aa9.6□□□□□ -0.87
HSPG2-212ENST00000493940 OR51H1Q8NH63 302 aa9.6□□□□□ -0.87
HSPG2-212ENST00000493940 GPX8Q8TED1 209 aa9.6□□□□□ -0.87
HSPG2-212ENST00000493940 FYTTD1Q96QD9 318 aaKnown RBP9.6□□□□□ -0.87
HSPG2-212ENST00000493940 ZNF2Q9BSG1 426 aaPredicted RBP9.6□□□□□ -0.87
HSPG2-212ENST00000493940 FXYD6Q9H0Q3 95 aa9.6□□□□□ -0.87
HSPG2-212ENST00000493940 EHFQ9NZC4 300 aa9.6□□□□□ -0.87
HSPG2-212ENST00000493940 MRPS7Q9Y2R9 242 aaKnown RBP9.6□□□□□ -0.87
HSPG2-212ENST00000493940 CSMD3Q7Z407 3707 aa9.59□□□□□ -0.87
HSPG2-212ENST00000493940 PPP5D1E7EU14 171 aa9.59□□□□□ -0.87
HSPG2-212ENST00000493940 MPPED1O15442 326 aa9.59□□□□□ -0.87
HSPG2-212ENST00000493940 PGLYRP1O75594 196 aaPredicted RBP9.59□□□□□ -0.87
HSPG2-212ENST00000493940 S1PR2O95136 353 aa9.59□□□□□ -0.87
HSPG2-212ENST00000493940 HLA-DMAP28067 261 aa9.59□□□□□ -0.87
HSPG2-212ENST00000493940 PRSS3P35030 304 aa9.59□□□□□ -0.87
HSPG2-212ENST00000493940 RPL27AP46776 148 aaKnown RBP9.59□□□□□ -0.87
HSPG2-212ENST00000493940 MECP2P51608 486 aaKnown RBP9.59□□□□□ -0.87
HSPG2-212ENST00000493940 ZNF585BQ52M93 769 aa9.59□□□□□ -0.87
HSPG2-212ENST00000493940 ANKRD13BQ86YJ7 626 aa9.59□□□□□ -0.87
HSPG2-212ENST00000493940 OR9G4Q8NGQ1 327 aa9.59□□□□□ -0.87
HSPG2-212ENST00000493940 MOB3AQ96BX8 217 aa9.59□□□□□ -0.87
HSPG2-212ENST00000493940 USMG5Q96IX5 58 aa9.59□□□□□ -0.87
HSPG2-212ENST00000493940 SPIN2AQ99865 258 aa9.59□□□□□ -0.87
HSPG2-212ENST00000493940 SPIN2BQ9BPZ2 258 aa9.59□□□□□ -0.87
HSPG2-212ENST00000493940 IFT46Q9NQC8 304 aa9.59□□□□□ -0.87
HSPG2-212ENST00000493940 SLC2A9Q9NRM0 540 aa9.59□□□□□ -0.87
HSPG2-212ENST00000493940 ZMAT5Q9UDW3 170 aaKnown RBP9.59□□□□□ -0.87
HSPG2-212ENST00000493940 SELENOKQ9Y6D0 94 aa9.59□□□□□ -0.87
HSPG2-212ENST00000493940 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.58□□□□□ -0.88
HSPG2-212ENST00000493940 UPK2O00526 184 aa9.58□□□□□ -0.88
HSPG2-212ENST00000493940 CRYGCP07315 174 aa9.58□□□□□ -0.88
HSPG2-212ENST00000493940 CTRB1P17538 263 aa9.58□□□□□ -0.88
HSPG2-212ENST00000493940 HRH1P35367 487 aa9.58□□□□□ -0.88
HSPG2-212ENST00000493940 EXOSC2Q13868 293 aaKnown RBP9.58□□□□□ -0.88
HSPG2-212ENST00000493940 POU2AF1Q16633 256 aa9.58□□□□□ -0.88
HSPG2-212ENST00000493940 KLK9Q2XQG4 91 aa9.58□□□□□ -0.88
HSPG2-212ENST00000493940 CTRB2Q6GPI1 263 aa9.58□□□□□ -0.88
HSPG2-212ENST00000493940 SNX29P2Q8IUI4 249 aa9.58□□□□□ -0.88
HSPG2-212ENST00000493940 ZBTB34Q8NCN2 500 aa9.58□□□□□ -0.88
HSPG2-212ENST00000493940 OR10W1Q8NGF6 305 aa9.58□□□□□ -0.88
HSPG2-212ENST00000493940 KCTD12Q96CX2 325 aaKnown RBP9.58□□□□□ -0.88
HSPG2-212ENST00000493940 CCDC140Q96MF4 163 aa9.58□□□□□ -0.88
HSPG2-212ENST00000493940 OR4C12Q96R67 309 aa9.58□□□□□ -0.88
HSPG2-212ENST00000493940 THAP7Q9BT49 309 aaPredicted RBP9.58□□□□□ -0.88
HSPG2-212ENST00000493940 RSRP1Q9BUV0 290 aa9.58□□□□□ -0.88
HSPG2-212ENST00000493940 VCX3AQ9NNX9 186 aa9.58□□□□□ -0.88
HSPG2-212ENST00000493940 BET1LQ9NYM9 111 aa9.58□□□□□ -0.88
HSPG2-212ENST00000493940 KLK9Q9UKQ9 250 aa9.58□□□□□ -0.88
HSPG2-212ENST00000493940 SMAD5-AS1Q9Y6J3 95 aa9.58□□□□□ -0.88
HSPG2-212ENST00000493940 IGLC7A0M8Q6 106 aa9.57□□□□□ -0.88
HSPG2-212ENST00000493940 DBX1A6NMT0 343 aa9.57□□□□□ -0.88
HSPG2-212ENST00000493940 NPIPB5A8MRT5 1133 aa9.57□□□□□ -0.88
HSPG2-212ENST00000493940 RBFOX2O43251 390 aaKnown RBP eCLIP9.57□□□□□ -0.88
HSPG2-212ENST00000493940 ACTL6BO94805 426 aa9.57□□□□□ -0.88
HSPG2-212ENST00000493940 GABARAPO95166 117 aa9.57□□□□□ -0.88
HSPG2-212ENST00000493940 HRASP01112 189 aa9.57□□□□□ -0.88
HSPG2-212ENST00000493940 APOA1P02647 267 aa9.57□□□□□ -0.88
HSPG2-212ENST00000493940 RLN1P04808 185 aa9.57□□□□□ -0.88
HSPG2-212ENST00000493940 FRMD6-AS1P0C7T7 363 aa9.57□□□□□ -0.88
HSPG2-212ENST00000493940 HLA-GP17693 338 aa9.57□□□□□ -0.88
HSPG2-212ENST00000493940 ZP3P21754 424 aa9.57□□□□□ -0.88
HSPG2-212ENST00000493940 PSMB6P28072 239 aa9.57□□□□□ -0.88
HSPG2-212ENST00000493940 ALDH3B2P48448 385 aa9.57□□□□□ -0.88
HSPG2-212ENST00000493940 OR2B8PP59922 312 aa9.57□□□□□ -0.88
HSPG2-212ENST00000493940 RPL8P62917 257 aaKnown RBP9.57□□□□□ -0.88
HSPG2-212ENST00000493940 ATP5G2Q06055 141 aa9.57□□□□□ -0.88
HSPG2-212ENST00000493940 C15orf32Q32M92 178 aa9.57□□□□□ -0.88
HSPG2-212ENST00000493940 RNASE12Q5GAN4 147 aaKnown RBP9.57□□□□□ -0.88
HSPG2-212ENST00000493940 GPR107Q5VW38 600 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms