RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 OR2A7Q96R45 310 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 RANBP3Q9H6Z4 567 aaPredicted RBP15.44■□□□□ 0.06
USP39-218ENST00000493829 RAB18Q9NP72 206 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 PLSCR3Q9NRY6 295 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 CACNG5Q9UF02 275 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 MOB4Q9Y3A3 225 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 TMED3Q9Y3Q3 217 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 DUXBA0A1W2PPF3 345 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 CRLF1O75462 422 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 RBMXL2O75526 392 aaKnown RBP15.44■□□□□ 0.06
USP39-218ENST00000493829 OR2F2O95006 317 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 P0C879 139 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 MYOD1P15172 320 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 CXCL3P19876 107 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 GNB1P62873 340 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 PJVKQ0ZLH3 352 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 POU2AF1Q16633 256 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 Q6ZRM9 215 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 PUSL1Q8N0Z8 303 aaKnown RBP15.44■□□□□ 0.06
USP39-218ENST00000493829 NPBQ8NG41 125 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 OR10C1Q96KK4 312 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 RNF5Q99942 180 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 CHIAQ9BZP6 476 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 PITPNC1Q9UKF7 332 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 FN1P02751 2386 aaKnown RBP15.43■□□□□ 0.06
USP39-218ENST00000493829 NDUFA3O95167 84 aa15.43■□□□□ 0.06
USP39-218ENST00000493829 SPDEFO95238 335 aa15.43■□□□□ 0.06
USP39-218ENST00000493829 TUSC1Q2TAM9 212 aa15.43■□□□□ 0.06
USP39-218ENST00000493829 Q8N9W7 124 aa15.43■□□□□ 0.06
USP39-218ENST00000493829 OR5M8Q8NGP6 311 aa15.43■□□□□ 0.06
USP39-218ENST00000493829 LSM10Q969L4 123 aaKnown RBP15.43■□□□□ 0.06
USP39-218ENST00000493829 AIFM2Q9BRQ8 373 aa15.43■□□□□ 0.06
USP39-218ENST00000493829 ZNF430Q9H8G1 570 aaPredicted RBP15.43■□□□□ 0.06
USP39-218ENST00000493829 ESM1Q9NQ30 184 aa15.43■□□□□ 0.06
USP39-218ENST00000493829 SIGLEC9Q9Y336 463 aa15.43■□□□□ 0.06
USP39-218ENST00000493829 OPN1MWP04001 364 aa15.42■□□□□ 0.06
USP39-218ENST00000493829 FAM157CP0CG43 387 aa15.42■□□□□ 0.06
USP39-218ENST00000493829 SULT1A3P0DMM9 295 aa15.42■□□□□ 0.06
USP39-218ENST00000493829 SULT1A4P0DMN0 295 aa15.42■□□□□ 0.06
USP39-218ENST00000493829 OPN1MW2P0DN77 364 aa15.42■□□□□ 0.06
USP39-218ENST00000493829 OPN1MW3P0DN78 364 aa15.42■□□□□ 0.06
USP39-218ENST00000493829 C5orf64Q2M2E5 130 aa15.42■□□□□ 0.06
USP39-218ENST00000493829 IAH1Q2TAA2 248 aaPredicted RBP15.42■□□□□ 0.06
USP39-218ENST00000493829 THOC7Q6I9Y2 204 aaKnown RBP15.42■□□□□ 0.06
USP39-218ENST00000493829 GSG1LQ6UXU4 331 aa15.42■□□□□ 0.06
USP39-218ENST00000493829 FAM71E2Q8N5Q1 922 aa15.42■□□□□ 0.06
USP39-218ENST00000493829 VSTM2AQ8TAG5 236 aa15.42■□□□□ 0.06
USP39-218ENST00000493829 ZNF418Q8TF45 676 aaPredicted RBP15.42■□□□□ 0.06
USP39-218ENST00000493829 PDCD10Q9BUL8 212 aa15.42■□□□□ 0.06
USP39-218ENST00000493829 BET1LQ9NYM9 111 aa15.42■□□□□ 0.06
USP39-218ENST00000493829 C1RLQ9NZP8 487 aa15.42■□□□□ 0.06
USP39-218ENST00000493829 GSKIPQ9P0R6 139 aa15.42■□□□□ 0.06
USP39-218ENST00000493829 PIGBOS1A0A0B4J2F0 54 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 UPK2O00526 184 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 FCN1O00602 326 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 SNAPC5O75971 98 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 CA2P00918 260 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 CRYGBP07316 175 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 H2BFSP57053 126 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 C5orf56Q8N8D9 126 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 TEX45Q8NA69 505 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 OR4A16Q8NH70 328 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 WDR89Q96FK6 387 aaPredicted RBP15.41■□□□□ 0.06
USP39-218ENST00000493829 RASL11BQ9BPW5 248 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 QTRT1Q9BXR0 403 aaKnown RBP15.41■□□□□ 0.06
USP39-218ENST00000493829 SCGB1D2O95969 90 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 RELBQ01201 579 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 SMCO1Q147U7 214 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 TNXAQ16473 311 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 MRGPRG-AS1Q2M3A8 158 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 SPINK9Q5DT21 86 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 C10orf55Q5SWW7 151 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 PPP1R27Q86WC6 154 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 OR8H1Q8NGG4 311 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 OR1S1Q8NH92 325 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 TMEM167AQ8TBQ9 72 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 POMT1Q9Y6A1 747 aa15.41■□□□□ 0.06
USP39-218ENST00000493829 PRSS8Q16651 343 aa15.4■□□□□ 0.06
USP39-218ENST00000493829 C9orf152Q5JTZ5 239 aa15.4■□□□□ 0.06
USP39-218ENST00000493829 SPIN2AQ99865 258 aa15.4■□□□□ 0.06
USP39-218ENST00000493829 SPIN2BQ9BPZ2 258 aa15.4■□□□□ 0.06
USP39-218ENST00000493829 C15orf61A6NNL5 157 aa15.39■□□□□ 0.05
USP39-218ENST00000493829 BCAP31P51572 246 aa15.39■□□□□ 0.05
USP39-218ENST00000493829 RPL8P62917 257 aaKnown RBP15.39■□□□□ 0.05
USP39-218ENST00000493829 ZBTB8BQ8NAP8 495 aaPredicted RBP15.39■□□□□ 0.05
USP39-218ENST00000493829 OR4A5Q8NH83 315 aa15.39■□□□□ 0.05
USP39-218ENST00000493829 A0A1B0GU03 582 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 GPR137BO60478 399 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 AMY1AP04745 511 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 IL6RP08887 468 aaPredicted RBP15.38■□□□□ 0.05
USP39-218ENST00000493829 HLA-GP17693 338 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 CD83Q01151 205 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 CHAC2Q8WUX2 184 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 HSPB9Q9BQS6 159 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 HINT2Q9BX68 163 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 OR51B2Q9Y5P1 312 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 CUBNO60494 3623 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 TEP1Q99973 2627 aaKnown RBP15.38■□□□□ 0.05
USP39-218ENST00000493829 HMX3A6NHT5 357 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 ST8SIA3O43173 380 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms