RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 ZBTB34Q8NCN2 500 aa13.78□□□□□ -0.2
PTPRU-207ENST00000492954 OR9G4Q8NGQ1 327 aa13.78□□□□□ -0.2
PTPRU-207ENST00000492954 GIMAP1Q8WWP7 306 aa13.78□□□□□ -0.2
PTPRU-207ENST00000492954 SLC25A46Q96AG3 418 aa13.78□□□□□ -0.2
PTPRU-207ENST00000492954 FUNDC2Q9BWH2 189 aa13.78□□□□□ -0.2
PTPRU-207ENST00000492954 U3KQK5 164 aa13.78□□□□□ -0.2
PTPRU-207ENST00000492954 STAB2Q8WWQ8 2551 aa13.78□□□□□ -0.2
PTPRU-207ENST00000492954 A0A1B0GW64 132 aa13.77□□□□□ -0.21
PTPRU-207ENST00000492954 E7EUB6 86 aa13.77□□□□□ -0.21
PTPRU-207ENST00000492954 HRASP01112 189 aa13.77□□□□□ -0.21
PTPRU-207ENST00000492954 IGLV1-51P01701 117 aa13.77□□□□□ -0.21
PTPRU-207ENST00000492954 IL6RP08887 468 aaPredicted RBP13.77□□□□□ -0.21
PTPRU-207ENST00000492954 RPL27AP46776 148 aaKnown RBP13.77□□□□□ -0.21
PTPRU-207ENST00000492954 NCS1P62166 190 aa13.77□□□□□ -0.21
PTPRU-207ENST00000492954 ATP5G2Q06055 141 aa13.77□□□□□ -0.21
PTPRU-207ENST00000492954 IL34Q6ZMJ4 242 aa13.77□□□□□ -0.21
PTPRU-207ENST00000492954 ZNF818PQ6ZRF7 136 aa13.77□□□□□ -0.21
PTPRU-207ENST00000492954 C19orf35Q6ZS72 473 aa13.77□□□□□ -0.21
PTPRU-207ENST00000492954 SPAG16Q8N0X2 631 aa13.77□□□□□ -0.21
PTPRU-207ENST00000492954 WWC2-AS2Q96NR7 200 aa13.77□□□□□ -0.21
PTPRU-207ENST00000492954 FYTTD1Q96QD9 318 aaKnown RBP13.77□□□□□ -0.21
PTPRU-207ENST00000492954 EHFQ9NZC4 300 aa13.77□□□□□ -0.21
PTPRU-207ENST00000492954 ANAPC10Q9UM13 185 aa13.77□□□□□ -0.21
PTPRU-207ENST00000492954 OR2J3O76001 311 aa13.76□□□□□ -0.21
PTPRU-207ENST00000492954 EIF4EP06730 217 aaKnown RBP13.76□□□□□ -0.21
PTPRU-207ENST00000492954 MYOD1P15172 320 aa13.76□□□□□ -0.21
PTPRU-207ENST00000492954 MAS1LP35410 378 aa13.76□□□□□ -0.21
PTPRU-207ENST00000492954 RFX2P48378 723 aa13.76□□□□□ -0.21
PTPRU-207ENST00000492954 HERV-K104P61576 105 aa13.76□□□□□ -0.21
PTPRU-207ENST00000492954 VBP1P61758 197 aa13.76□□□□□ -0.21
PTPRU-207ENST00000492954 RPEL1Q2QD12 228 aa13.76□□□□□ -0.21
PTPRU-207ENST00000492954 SLC25A42Q86VD7 318 aa13.76□□□□□ -0.21
PTPRU-207ENST00000492954 OR51H1Q8NH63 302 aa13.76□□□□□ -0.21
PTPRU-207ENST00000492954 ZNF257Q9Y2Q1 563 aa13.76□□□□□ -0.21
PTPRU-207ENST00000492954 BMPR1BO00238 502 aa13.75□□□□□ -0.21
PTPRU-207ENST00000492954 RBFOX2O43251 390 aaKnown RBP eCLIP13.75□□□□□ -0.21
PTPRU-207ENST00000492954 PMP2P02689 132 aa13.75□□□□□ -0.21
PTPRU-207ENST00000492954 ZNF735P0CB33 412 aa13.75□□□□□ -0.21
PTPRU-207ENST00000492954 AREGP15514 252 aa13.75□□□□□ -0.21
PTPRU-207ENST00000492954 RPL8P62917 257 aaKnown RBP13.75□□□□□ -0.21
PTPRU-207ENST00000492954 CATR1Q13166 79 aa13.75□□□□□ -0.21
PTPRU-207ENST00000492954 NECAP1Q8NC96 275 aa13.75□□□□□ -0.21
PTPRU-207ENST00000492954 KCTD12Q96CX2 325 aaKnown RBP13.75□□□□□ -0.21
PTPRU-207ENST00000492954 SLC2A9Q9NRM0 540 aa13.75□□□□□ -0.21
PTPRU-207ENST00000492954 COMMD3Q9UBI1 195 aa13.75□□□□□ -0.21
PTPRU-207ENST00000492954 DPPA5A6NC42 116 aa13.74□□□□□ -0.21
PTPRU-207ENST00000492954 NPIPB5A8MRT5 1133 aa13.74□□□□□ -0.21
PTPRU-207ENST00000492954 HLA-GP17693 338 aa13.74□□□□□ -0.21
PTPRU-207ENST00000492954 NAT1P18440 290 aa13.74□□□□□ -0.21
PTPRU-207ENST00000492954 GNRHRP30968 328 aa13.74□□□□□ -0.21
PTPRU-207ENST00000492954 PRSS3P35030 304 aa13.74□□□□□ -0.21
PTPRU-207ENST00000492954 TATDN3Q17R31 274 aa13.74□□□□□ -0.21
PTPRU-207ENST00000492954 C15orf32Q32M92 178 aa13.74□□□□□ -0.21
PTPRU-207ENST00000492954 AADACL3Q5VUY0 350 aa13.74□□□□□ -0.21
PTPRU-207ENST00000492954 OR4A47Q6IF82 309 aa13.74□□□□□ -0.21
PTPRU-207ENST00000492954 DHRS11Q6UWP2 260 aa13.74□□□□□ -0.21
PTPRU-207ENST00000492954 OR5H2Q8NGV7 314 aa13.74□□□□□ -0.21
PTPRU-207ENST00000492954 ZNF2Q9BSG1 426 aaPredicted RBP13.74□□□□□ -0.21
PTPRU-207ENST00000492954 HRASLSQ9HDD0 168 aa13.74□□□□□ -0.21
PTPRU-207ENST00000492954 BET1LQ9NYM9 111 aa13.74□□□□□ -0.21
PTPRU-207ENST00000492954 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.73□□□□□ -0.21
PTPRU-207ENST00000492954 CGB1A6NKQ9 187 aa13.73□□□□□ -0.21
PTPRU-207ENST00000492954 S1PR2O95136 353 aa13.73□□□□□ -0.21
PTPRU-207ENST00000492954 CSN3P07498 182 aa13.73□□□□□ -0.21
PTPRU-207ENST00000492954 FRMD6-AS1P0C7T7 363 aa13.73□□□□□ -0.21
PTPRU-207ENST00000492954 TAS2R31P59538 309 aa13.73□□□□□ -0.21
PTPRU-207ENST00000492954 TAS2R46P59540 309 aa13.73□□□□□ -0.21
PTPRU-207ENST00000492954 SBSPONQ8IVN8 264 aa13.73□□□□□ -0.21
PTPRU-207ENST00000492954 OR4A5Q8NH83 315 aa13.73□□□□□ -0.21
PTPRU-207ENST00000492954 MOB3AQ96BX8 217 aa13.73□□□□□ -0.21
PTPRU-207ENST00000492954 AIFM2Q9BRQ8 373 aa13.73□□□□□ -0.21
PTPRU-207ENST00000492954 FBXL7Q9UJT9 491 aa13.73□□□□□ -0.21
PTPRU-207ENST00000492954 NBEAL2Q6ZNJ1 2754 aa13.73□□□□□ -0.21
PTPRU-207ENST00000492954 TRAV3A0A0B4J244 114 aa13.72□□□□□ -0.21
PTPRU-207ENST00000492954 HPRT1P00492 218 aa13.72□□□□□ -0.21
PTPRU-207ENST00000492954 SMIM18P0DKX4 95 aa13.72□□□□□ -0.21
PTPRU-207ENST00000492954 NQO2P16083 231 aa13.72□□□□□ -0.21
PTPRU-207ENST00000492954 PSMB6P28072 239 aa13.72□□□□□ -0.21
PTPRU-207ENST00000492954 POU2AF1Q16633 256 aa13.72□□□□□ -0.21
PTPRU-207ENST00000492954 Q8N1Y9 231 aa13.72□□□□□ -0.21
PTPRU-207ENST00000492954 CD300LFQ8TDQ1 290 aa13.72□□□□□ -0.21
PTPRU-207ENST00000492954 FANCD2OSQ96PS1 177 aa13.72□□□□□ -0.21
PTPRU-207ENST00000492954 FXYD6Q9H0Q3 95 aa13.72□□□□□ -0.21
PTPRU-207ENST00000492954 HUWE1Q7Z6Z7 4374 aaKnown RBP13.72□□□□□ -0.21
PTPRU-207ENST00000492954 PPP5D1E7EU14 171 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 UPK2O00526 184 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 NDUFB8O95169 186 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 IGHV3-23P01764 117 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 APOA1P02647 267 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 RLN1P04808 185 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 REG1AP05451 166 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 CRYGCP07315 174 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 RPA2P15927 270 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 CTRB1P17538 263 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 HLA-DMAP28067 261 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 HRH1P35367 487 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 CTRB2Q6GPI1 263 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 SNX29P2Q8IUI4 249 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 LYSMD2Q8IV50 215 aa13.71□□□□□ -0.21
PTPRU-207ENST00000492954 DMBX1Q8NFW5 382 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms