RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991		Q8N6K4	173 aa		10.37	□□□□□ -0.75
NR1H3-223	ENST00000486991	OSR1	Q8TAX0	266 aa	Predicted RBP	10.37	□□□□□ -0.75
NR1H3-223	ENST00000486991	ZNF431	Q8TF32	576 aa	Predicted RBP	10.37	□□□□□ -0.75
NR1H3-223	ENST00000486991	R3HDM4	Q96D70	268 aa		10.37	□□□□□ -0.75
NR1H3-223	ENST00000486991	TSNAX	Q99598	290 aa	Known RBP	10.37	□□□□□ -0.75
NR1H3-223	ENST00000486991	ZNF702P	Q9H963	129 aa		10.37	□□□□□ -0.75
NR1H3-223	ENST00000486991	PLEKHA2	Q9HB19	425 aa		10.37	□□□□□ -0.75
NR1H3-223	ENST00000486991	GPN1	Q9HCN4	374 aa	Predicted RBP	10.37	□□□□□ -0.75
NR1H3-223	ENST00000486991	COMMD9	Q9P000	198 aa		10.37	□□□□□ -0.75
NR1H3-223	ENST00000486991	PLXNB1	O43157	2135 aa		10.37	□□□□□ -0.75
NR1H3-223	ENST00000486991	NBEAL2	Q6ZNJ1	2754 aa		10.37	□□□□□ -0.75
NR1H3-223	ENST00000486991	NCBP2L	A6PVI3	153 aa	Known RBP	10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	DUS4L	O95620	317 aa	Known RBP	10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	HRAS	P01112	189 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	KRAS	P01116	189 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	IGKV1-39	P01597	117 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	IGKV1D-39	P04432	117 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	NQO2	P16083	231 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	LGALS7	P47929	136 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	ERVK-16	P61578	105 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	SRPX	P78539	464 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	LIN54	Q6MZP7	749 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	SELENOH	Q8IZQ5	122 aa	Known RBP	10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	VKORC1L1	Q8N0U8	176 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	LGI3	Q8N145	548 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991		Q8N2B8	174 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	UXS1	Q8NBZ7	420 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	DMBX1	Q8NFW5	382 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	COQ8A	Q8NI60	647 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	RNASE11	Q8TAA1	199 aa	Known RBP	10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	LHFPL5	Q8TAF8	219 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	WIPF2	Q8TF74	440 aa	Predicted RBP	10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	RBM14	Q96PK6	669 aa	Known RBP	10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	RNF5	Q99942	180 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	SLC25A33	Q9BSK2	321 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	KIAA1456	Q9P272	454 aa		10.36	□□□□□ -0.75
NR1H3-223	ENST00000486991	SRRM4	A7MD48	611 aa	Known RBP	10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	NBR2	O15453	112 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	SLC25A17	O43808	307 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	CREBL2	O60519	120 aa	Predicted RBP	10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	ATG12	O94817	140 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	OR2F2	O95006	317 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	CDS2	O95674	445 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	G6PC	P35575	357 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	AKR1C2	P52895	323 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	F2RL1	P55085	397 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	PLGLA	Q15195	96 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	PSG5	Q15238	335 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	TATDN3	Q17R31	274 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	VMA21	Q3ZAQ7	101 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	KLHDC1	Q8N7A1	406 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	RBPMS	Q93062	196 aa	Known RBP	10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	RHOV	Q96L33	236 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	TMEM56	Q96MV1	263 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	PHB2	Q99623	299 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	AIFM2	Q9BRQ8	373 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	FBXL15	Q9H469	300 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	SERTAD4	Q9NUC0	356 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	ALG5	Q9Y673	324 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991	TMEM56-RWDD3	S4R434	201 aa		10.35	□□□□□ -0.75
NR1H3-223	ENST00000486991		A0A0B4J293	547 aa		10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	MARCH11	A6NNE9	402 aa		10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	RRH	O14718	337 aa		10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	SPDEF	O95238	335 aa		10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	IGLV2-23	P01705	113 aa		10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	SAA1	P0DJI8	122 aa	Predicted RBP	10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	SAMD5	Q5TGI4	173 aa		10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991		Q6ZS46	218 aa		10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	LYZL2	Q7Z4W2	148 aa		10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	SLC35G3	Q8N808	338 aa		10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	NPB	Q8NG41	125 aa		10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	OR8H1	Q8NGG4	311 aa		10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	MITD1	Q8WV92	249 aa		10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	IL22RA2	Q969J5	263 aa		10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	RRNAD1	Q96FB5	475 aa	Known RBP	10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	SEC22A	Q96IW7	307 aa		10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	PLSCR3	Q9NRY6	295 aa		10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	METTL1	Q9UBP6	276 aa	Known RBP	10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	MOB4	Q9Y3A3	225 aa		10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	KMT2C	Q8NEZ4	4911 aa	Known RBP	10.34	□□□□□ -0.75
NR1H3-223	ENST00000486991	SNRPGP15	A8MWD9	76 aa		10.33	□□□□□ -0.76
NR1H3-223	ENST00000486991		M0QZK8	103 aa		10.33	□□□□□ -0.76
NR1H3-223	ENST00000486991	SSNA1	O43805	119 aa		10.33	□□□□□ -0.76
NR1H3-223	ENST00000486991	OR2A4	O95047	310 aa		10.33	□□□□□ -0.76
NR1H3-223	ENST00000486991	NDUFA3	O95167	84 aa		10.33	□□□□□ -0.76
NR1H3-223	ENST00000486991	IGKV1-5	P01602	117 aa		10.33	□□□□□ -0.76
NR1H3-223	ENST00000486991	OPN1MW	P04001	364 aa		10.33	□□□□□ -0.76
NR1H3-223	ENST00000486991	HOXB5	P09067	269 aa		10.33	□□□□□ -0.76
NR1H3-223	ENST00000486991	OPN1MW2	P0DN77	364 aa		10.33	□□□□□ -0.76
NR1H3-223	ENST00000486991	OPN1MW3	P0DN78	364 aa		10.33	□□□□□ -0.76
NR1H3-223	ENST00000486991	UBE2K	P61086	200 aa		10.33	□□□□□ -0.76
NR1H3-223	ENST00000486991	OXLD1	Q5BKU9	147 aa		10.33	□□□□□ -0.76
NR1H3-223	ENST00000486991	OR4A47	Q6IF82	309 aa		10.33	□□□□□ -0.76
NR1H3-223	ENST00000486991	H2BFWT	Q7Z2G1	175 aa		10.33	□□□□□ -0.76
NR1H3-223	ENST00000486991	LRTM2	Q8N967	370 aa		10.33	□□□□□ -0.76
NR1H3-223	ENST00000486991	OR2A7	Q96R45	310 aa		10.33	□□□□□ -0.76
NR1H3-223	ENST00000486991	CLCC1	Q96S66	551 aa		10.33	□□□□□ -0.76
NR1H3-223	ENST00000486991	RASL11B	Q9BPW5	248 aa		10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms