RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-223	ENST00000485796	LGI3	Q8N145	548 aa		10.05	□□□□□ -0.8
HDAC7-223	ENST00000485796	TEX45	Q8NA69	505 aa		10.05	□□□□□ -0.8
HDAC7-223	ENST00000485796	LHFPL5	Q8TAF8	219 aa		10.05	□□□□□ -0.8
HDAC7-223	ENST00000485796	ZFAND2B	Q8WV99	257 aa		10.05	□□□□□ -0.8
HDAC7-223	ENST00000485796	OR2A7	Q96R45	310 aa		10.05	□□□□□ -0.8
HDAC7-223	ENST00000485796	C19orf24	Q9BVV8	132 aa		10.05	□□□□□ -0.8
HDAC7-223	ENST00000485796	NPFFR1	Q9GZQ6	430 aa		10.05	□□□□□ -0.8
HDAC7-223	ENST00000485796	TET2	Q6N021	2002 aa	Predicted RBP	10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	TRAV3	A0A0B4J244	114 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	TSPAN9	O75954	239 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	ATG12	O94817	140 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	IL5	P05113	134 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	MYOD1	P15172	320 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	AKR1C2	P52895	323 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	RAG2	P55895	527 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	SRPX	P78539	464 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	SSBP2	P81877	361 aa	Predicted RBP	10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	NDP	Q00604	133 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	HIST2H2BD	Q6DRA6	164 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	OR4A47	Q6IF82	309 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	H2BFWT	Q7Z2G1	175 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	PUSL1	Q8N0Z8	303 aa	Known RBP	10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	COQ8A	Q8NI60	647 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	VSTM2A	Q8TAG5	236 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	RBPMS	Q93062	196 aa	Known RBP	10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	SEC22A	Q96IW7	307 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	TMEM56	Q96MV1	263 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	RANBP3	Q9H6Z4	567 aa	Predicted RBP	10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	TMEM140	Q9NV12	185 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	LINC00527	Q9UJ94	153 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	TMEM56-RWDD3	S4R434	201 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	STAB1	Q9NY15	2570 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	ANK2	Q01484	3957 aa		10.04	□□□□□ -0.8
HDAC7-223	ENST00000485796	KBTBD11	O94819	623 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	NDUFA7	O95182	113 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	DUS4L	O95620	317 aa	Known RBP	10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	IGKV1-5	P01602	117 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	GNB1	P62873	340 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	OXA1L	Q15070	435 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	POU2AF1	Q16633	256 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	IZUMO4	Q1ZYL8	232 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	LYZL2	Q7Z4W2	148 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	PPP1R27	Q86WC6	154 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796		Q8N2B8	174 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	SLC35G3	Q8N808	338 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	UXS1	Q8NBZ7	420 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	LINC01006	Q8NI28	216 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	TMEM167A	Q8TBQ9	72 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	ZNF431	Q8TF32	576 aa	Predicted RBP	10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	IL22RA2	Q969J5	263 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	RRNAD1	Q96FB5	475 aa	Known RBP	10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	PRSS22	Q9GZN4	317 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	GPN1	Q9HCN4	374 aa	Predicted RBP	10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	SERTAD4	Q9NUC0	356 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	BET1L	Q9NYM9	111 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	NSG2	Q9Y328	171 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	FBXO7	Q9Y3I1	522 aa		10.03	□□□□□ -0.8
HDAC7-223	ENST00000485796	IGHV7-81	A0A0B4J1V7	117 aa		10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	TMEM89	A2RUT3	159 aa		10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	UPK2	O00526	184 aa		10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	PRAF2	O60831	178 aa		10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	SNAPC5	O75971	98 aa		10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	CNIH1	O95406	144 aa		10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	CA2	P00918	260 aa		10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	HOXB5	P09067	269 aa		10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	OR9G9	P0C7N8	305 aa		10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	KRTAP10-3	P60369	221 aa		10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	RPL15	P61313	204 aa	Known RBP	10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	TNXA	Q16473	311 aa		10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	PRSS8	Q16651	343 aa		10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	C10orf99	Q6UWK7	81 aa		10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	OR4A5	Q8NH83	315 aa		10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	ABHD5	Q8WTS1	349 aa		10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	GPR146	Q96CH1	333 aa		10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	NOL4L	Q96MY1	436 aa	Predicted RBP	10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	PHB2	Q99623	299 aa		10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	C16orf95	Q9H693	158 aa		10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796	ZNF430	Q9H8G1	570 aa	Predicted RBP	10.02	□□□□□ -0.81
HDAC7-223	ENST00000485796		A0A0B4J2A0	478 aa		10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796	PIGBOS1	A0A0B4J2F0	54 aa		10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796		A0A0G2JRQ6	117 aa		10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796	CREBL2	O60519	120 aa	Predicted RBP	10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796	RBMXL2	O75526	392 aa	Known RBP	10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796	ACTL6B	O94805	426 aa		10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796	HLA-DRB1	P01911	266 aa		10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796	IL6R	P08887	468 aa	Predicted RBP	10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796	EGR2	P11161	476 aa	Predicted RBP	10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796	RPL8	P62917	257 aa	Known RBP	10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796	CX3CL1	P78423	397 aa		10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796	SRSF4	Q08170	494 aa	Known RBP	10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796	FXYD3	Q14802	87 aa		10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796	TATDN3	Q17R31	274 aa		10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796	C10orf55	Q5SWW7	151 aa		10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796	SLC35E3	Q7Z769	313 aa		10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796	MMD2	Q8IY49	270 aa		10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796	LRTM2	Q8N967	370 aa		10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796	MINDY2	Q8NBR6	621 aa		10.01	□□□□□ -0.81
HDAC7-223	ENST00000485796	OR4A16	Q8NH70	328 aa		10.01	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms