RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 MYOD1P15172 320 aa14.88□□□□□ -0.03
PDLIM1-202ENST00000477757 RPL27AP46776 148 aaKnown RBP14.88□□□□□ -0.03
PDLIM1-202ENST00000477757 ACSM3Q53FZ2 586 aa14.88□□□□□ -0.03
PDLIM1-202ENST00000477757 RARRES2Q99969 163 aa14.88□□□□□ -0.03
PDLIM1-202ENST00000477757 RBM7Q9Y580 266 aaKnown RBP14.88□□□□□ -0.03
PDLIM1-202ENST00000477757 MFSD2BA6NFX1 497 aa14.87□□□□□ -0.03
PDLIM1-202ENST00000477757 CLEC3BP05452 202 aa14.87□□□□□ -0.03
PDLIM1-202ENST00000477757 ZNF735P0CB33 412 aa14.87□□□□□ -0.03
PDLIM1-202ENST00000477757 AREGP15514 252 aa14.87□□□□□ -0.03
PDLIM1-202ENST00000477757 HIST1H1BP16401 226 aaKnown RBP14.87□□□□□ -0.03
PDLIM1-202ENST00000477757 WNT4P56705 351 aa14.87□□□□□ -0.03
PDLIM1-202ENST00000477757 ST3GAL4Q11206 333 aa14.87□□□□□ -0.03
PDLIM1-202ENST00000477757 SETD9Q8NE22 299 aa14.87□□□□□ -0.03
PDLIM1-202ENST00000477757 ZNF555Q8NEP9 628 aa14.87□□□□□ -0.03
PDLIM1-202ENST00000477757 OR4C46A6NHA9 309 aa14.86□□□□□ -0.03
PDLIM1-202ENST00000477757 E7EUB6 86 aa14.86□□□□□ -0.03
PDLIM1-202ENST00000477757 KBTBD11O94819 623 aa14.86□□□□□ -0.03
PDLIM1-202ENST00000477757 FCGR3AP08637 254 aa14.86□□□□□ -0.03
PDLIM1-202ENST00000477757 P2RY14Q15391 338 aa14.86□□□□□ -0.03
PDLIM1-202ENST00000477757 PLAC9Q5JTB6 97 aa14.86□□□□□ -0.03
PDLIM1-202ENST00000477757 TMEM190Q8WZ59 177 aa14.86□□□□□ -0.03
PDLIM1-202ENST00000477757 CXorf58Q96LI9 332 aa14.86□□□□□ -0.03
PDLIM1-202ENST00000477757 KRTAP4-5Q9BYR2 181 aa14.86□□□□□ -0.03
PDLIM1-202ENST00000477757 C6orf62Q9GZU0 229 aaPredicted RBP14.86□□□□□ -0.03
PDLIM1-202ENST00000477757 OR51E2Q9H255 320 aa14.86□□□□□ -0.03
PDLIM1-202ENST00000477757 IGLV11-55A0A075B6I3 123 aa14.85□□□□□ -0.03
PDLIM1-202ENST00000477757 MYL12BO14950 172 aa14.85□□□□□ -0.03
PDLIM1-202ENST00000477757 XRCC3O43542 346 aa14.85□□□□□ -0.03
PDLIM1-202ENST00000477757 FCGR3BO75015 233 aa14.85□□□□□ -0.03
PDLIM1-202ENST00000477757 CDK1P06493 297 aa14.85□□□□□ -0.03
PDLIM1-202ENST00000477757 GPR183P32249 361 aa14.85□□□□□ -0.03
PDLIM1-202ENST00000477757 ARFRP1Q13795 201 aa14.85□□□□□ -0.03
PDLIM1-202ENST00000477757 OR5B3Q8NH48 314 aa14.85□□□□□ -0.03
PDLIM1-202ENST00000477757 DCUN1D5Q9BTE7 237 aa14.85□□□□□ -0.03
PDLIM1-202ENST00000477757 ZNF436Q9C0F3 470 aaPredicted RBP14.85□□□□□ -0.03
PDLIM1-202ENST00000477757 IGHV3-35A0A0C4DH35 117 aa14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 MPTX1A8MV57 137 aa14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 IGLL5B9A064 214 aa14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 ATP5HO75947 161 aa14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 MAS1LP35410 378 aa14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 MFAP2P55001 183 aa14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 MRPS15P82914 257 aaKnown RBP14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 HSD17B12Q53GQ0 312 aa14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 LAMTOR1Q6IAA8 161 aa14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 KCTD9Q7L273 389 aa14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 VKORC1L1Q8N0U8 176 aa14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 MS4A15Q8N5U1 240 aa14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 OR56B1Q8NGI3 324 aa14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 VSTM2AQ8TAG5 236 aa14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 TMEM167AQ8TBQ9 72 aa14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 ZNF502Q8TBZ5 544 aa14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 CD300LFQ8TDQ1 290 aa14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 GINS4Q9BRT9 223 aa14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 CSTL1Q9H114 145 aa14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 DAZ1Q9NQZ3 744 aaKnown RBP14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 SMPD3Q9NY59 655 aaPredicted RBP14.84□□□□□ -0.03
PDLIM1-202ENST00000477757 SLC17A2O00624 439 aa14.83□□□□□ -0.04
PDLIM1-202ENST00000477757 H1FOOQ8IZA3 346 aaPredicted RBP14.83□□□□□ -0.04
PDLIM1-202ENST00000477757 PUSL1Q8N0Z8 303 aaKnown RBP14.83□□□□□ -0.04
PDLIM1-202ENST00000477757 OR11H2Q8NH07 326 aa14.83□□□□□ -0.04
PDLIM1-202ENST00000477757 OR2A7Q96R45 310 aa14.83□□□□□ -0.04
PDLIM1-202ENST00000477757 PLGRKTQ9HBL7 147 aa14.83□□□□□ -0.04
PDLIM1-202ENST00000477757 MRPS7Q9Y2R9 242 aaKnown RBP14.83□□□□□ -0.04
PDLIM1-202ENST00000477757 KCNK7Q9Y2U2 307 aa14.83□□□□□ -0.04
PDLIM1-202ENST00000477757 PRELID3BQ9Y3B1 194 aa14.83□□□□□ -0.04
PDLIM1-202ENST00000477757 C11orf94C9JXX5 98 aa14.82□□□□□ -0.04
PDLIM1-202ENST00000477757 OR2B11Q5JQS5 317 aa14.82□□□□□ -0.04
PDLIM1-202ENST00000477757 PLET1Q6UQ28 207 aa14.82□□□□□ -0.04
PDLIM1-202ENST00000477757 MAFIPQ8WZ33 124 aa14.82□□□□□ -0.04
PDLIM1-202ENST00000477757 GFI1Q99684 422 aa14.82□□□□□ -0.04
PDLIM1-202ENST00000477757 HSPG2P98160 4391 aa14.82□□□□□ -0.04
PDLIM1-202ENST00000477757 PRSS29PA6NIE9 313 aa14.81□□□□□ -0.04
PDLIM1-202ENST00000477757 REG1AP05451 166 aa14.81□□□□□ -0.04
PDLIM1-202ENST00000477757 UCHL1P09936 223 aa14.81□□□□□ -0.04
PDLIM1-202ENST00000477757 DEFA4P12838 97 aa14.81□□□□□ -0.04
PDLIM1-202ENST00000477757 ADMP35318 185 aa14.81□□□□□ -0.04
PDLIM1-202ENST00000477757 PSMD7P51665 324 aa14.81□□□□□ -0.04
PDLIM1-202ENST00000477757 APRG1Q8IVJ8 170 aa14.81□□□□□ -0.04
PDLIM1-202ENST00000477757 ZNF645Q8N7E2 425 aa14.81□□□□□ -0.04
PDLIM1-202ENST00000477757 OR4S2Q8NH73 311 aa14.81□□□□□ -0.04
PDLIM1-202ENST00000477757 DEFB4AO15263 64 aa14.8□□□□□ -0.04
PDLIM1-202ENST00000477757 TGOLN2O43493 480 aa14.8□□□□□ -0.04
PDLIM1-202ENST00000477757 RPL30P62888 115 aaKnown RBP14.8□□□□□ -0.04
PDLIM1-202ENST00000477757 IRF3Q14653 427 aa14.8□□□□□ -0.04
PDLIM1-202ENST00000477757 RAB11BQ15907 218 aa14.8□□□□□ -0.04
PDLIM1-202ENST00000477757 HRH4Q9H3N8 390 aa14.8□□□□□ -0.04
PDLIM1-202ENST00000477757 RTL8CO15255 209 aa14.79□□□□□ -0.04
PDLIM1-202ENST00000477757 CD36P16671 472 aa14.79□□□□□ -0.04
PDLIM1-202ENST00000477757 ZNF124Q15973 351 aa14.79□□□□□ -0.04
PDLIM1-202ENST00000477757 NANOGP1Q8N7R0 232 aa14.79□□□□□ -0.04
PDLIM1-202ENST00000477757 RAB3CQ96E17 227 aa14.79□□□□□ -0.04
PDLIM1-202ENST00000477757 CGB1A6NKQ9 187 aa14.78□□□□□ -0.04
PDLIM1-202ENST00000477757 CTSDP07339 412 aaPredicted RBP14.78□□□□□ -0.04
PDLIM1-202ENST00000477757 PTBP1P26599 531 aaKnown RBP eCLIP14.78□□□□□ -0.04
PDLIM1-202ENST00000477757 RPL8P62917 257 aaKnown RBP14.78□□□□□ -0.04
PDLIM1-202ENST00000477757 SSX1Q16384 188 aa14.78□□□□□ -0.04
PDLIM1-202ENST00000477757 Q6ZS49 121 aa14.78□□□□□ -0.04
PDLIM1-202ENST00000477757 OR4A5Q8NH83 315 aa14.78□□□□□ -0.04
PDLIM1-202ENST00000477757 CENPOQ9BU64 300 aa14.78□□□□□ -0.04
PDLIM1-202ENST00000477757 RBMX2Q9Y388 322 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms