RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 ERVS71-1P61550 626 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 TBPL1P62380 186 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 GNA12Q03113 381 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 ZNF117Q03924 483 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 EDDM3AQ14507 147 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 TAF1AQ15573 450 aaPredicted RBP2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 CCDC58Q4VC31 144 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 HACD4Q5VWC8 232 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 ZNF322Q6U7Q0 402 aaPredicted RBP2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 ALKAL1Q6UXT8 129 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 C1orf158Q8N1D5 194 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 ZNF664Q8N3J9 261 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 LINC00304Q8N9R0 145 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 RASSF5Q8WWW0 418 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 RNASE6Q93091 150 aaKnown RBP2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 BTF3L4Q96K17 158 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 PRAP1Q96NZ9 151 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 TM2D3Q9BRN9 247 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 CMTM6Q9NX76 183 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 GLTPQ9NZD2 209 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 GINS2Q9Y248 185 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 HEY1Q9Y5J3 304 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 TRPM3Q9HCF6 1732 aaPredicted RBP2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 ADAMTSL1Q8N6G6 1762 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 ERCC6Q03468 1493 aa2.33□□□□□ -2.04
SOX2-OT-207ENST00000476964 OTOFQ9HC10 1997 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 A0A1B0GV72 72 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 PQLC2LA1A4F0 135 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 UBFD1O14562 309 aaKnown RBP2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 CDS2O95674 445 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 CCL3P10147 92 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 FGF6P10767 208 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 SERPINB1P30740 379 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 CAPZBP47756 277 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 GABRA2P47869 451 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 TRIQKQ629K1 86 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 GLT6D1Q7Z4J2 308 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 SPATA12Q7Z6I5 190 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 GPHB5Q86YW7 130 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 CLVS1Q8IUQ0 354 aaPredicted RBP2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 SLC22A24Q8N4F4 322 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 KLK6Q92876 244 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 TVP23CQ96ET8 276 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 CNBD2Q96M20 576 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 PPP1R2P1Q96PQ5 205 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 PHB2Q99623 299 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 ULBP3Q9BZM4 244 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 TLNRD1Q9H1K6 362 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 C16orf95Q9H693 158 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 AK3Q9UIJ7 227 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 ZNF391Q9UJN7 358 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 ANGPT4Q9Y264 503 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 ERGIC3Q9Y282 383 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 FLT4P35916 1363 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 GRIN2BQ13224 1484 aa2.32□□□□□ -2.04
SOX2-OT-207ENST00000476964 VIRMAQ69YN4 1812 aaKnown RBP2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 LCTP09848 1927 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 C9JCJ5 164 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 LST1O00453 97 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 FADS1O60427 444 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 NOS1APO75052 506 aaPredicted RBP2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 IGHV1-69P01742 117 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 CTSGP08311 255 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 MAGEA12P43365 314 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 ZNF140P52738 457 aaPredicted RBP2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 TAS2R30P59541 319 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 TNFAIP6P98066 277 aaPredicted RBP2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 ACOT6Q3I5F7 207 aaPredicted RBP2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 TMEM97Q5BJF2 176 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 CNEP1R1Q8N9A8 125 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 OR13C8Q8NGS7 320 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 SGMS2Q8NHU3 365 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 BORCS5Q969J3 196 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 ROPN1LQ96C74 230 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 RMND5BQ96G75 393 aaPredicted RBP2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 PKMYT1Q99640 499 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 CMSS1Q9BQ75 279 aaKnown RBP2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 MIEN1Q9BRT3 115 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 CCDC171Q6TFL3 1326 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 DCCP43146 1447 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 ADGRL3Q9HAR2 1447 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 CAMSAP1Q5T5Y3 1602 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 TAF1LQ8IZX4 1826 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 NLRC5Q86WI3 1866 aa2.31□□□□□ -2.04
SOX2-OT-207ENST00000476964 TMEM269A0A1B0GVZ9 245 aa2.3□□□□□ -2.04
SOX2-OT-207ENST00000476964 A0A1W2PNM2 257 aa2.3□□□□□ -2.04
SOX2-OT-207ENST00000476964 C17orf51A8MQB3 221 aa2.3□□□□□ -2.04
SOX2-OT-207ENST00000476964 NDUFB2O95178 105 aa2.3□□□□□ -2.04
SOX2-OT-207ENST00000476964 CRYZL1O95825 349 aa2.3□□□□□ -2.04
SOX2-OT-207ENST00000476964 KCNE1P15382 129 aa2.3□□□□□ -2.04
SOX2-OT-207ENST00000476964 RPL27AP46776 148 aaKnown RBP2.3□□□□□ -2.04
SOX2-OT-207ENST00000476964 RPL30P62888 115 aaKnown RBP2.3□□□□□ -2.04
SOX2-OT-207ENST00000476964 HIST1H3AP68431 136 aa2.3□□□□□ -2.04
SOX2-OT-207ENST00000476964 H3F3AP84243 136 aa2.3□□□□□ -2.04
SOX2-OT-207ENST00000476964 PSG4Q00888 419 aa2.3□□□□□ -2.04
SOX2-OT-207ENST00000476964 C2orf91Q6ZV80 131 aa2.3□□□□□ -2.04
SOX2-OT-207ENST00000476964 C20orf196Q8IYI0 205 aa2.3□□□□□ -2.04
SOX2-OT-207ENST00000476964 MAFIPQ8WZ33 124 aa2.3□□□□□ -2.04
SOX2-OT-207ENST00000476964 FGF13Q92913 245 aa2.3□□□□□ -2.04
SOX2-OT-207ENST00000476964 BORCS7Q96B45 105 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms