RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 CHPT1Q8WUD6 406 aa15□□□□□ -0.01
USP11-205ENST00000467378 RHOVQ96L33 236 aa15□□□□□ -0.01
USP11-205ENST00000467378 COPZ2Q9P299 210 aa15□□□□□ -0.01
USP11-205ENST00000467378 C14orf166Q9Y224 244 aaKnown RBP15□□□□□ -0.01
USP11-205ENST00000467378 VSIG4Q9Y279 399 aa15□□□□□ -0.01
USP11-205ENST00000467378 FBXO7Q9Y3I1 522 aa15□□□□□ -0.01
USP11-205ENST00000467378 TNCP24821 2201 aa14.99□□□□□ -0.01
USP11-205ENST00000467378 NAP1L6A6NFF2 107 aa14.99□□□□□ -0.01
USP11-205ENST00000467378 ATP6V0E1O15342 81 aa14.99□□□□□ -0.01
USP11-205ENST00000467378 OR2A4O95047 310 aa14.99□□□□□ -0.01
USP11-205ENST00000467378 IL6RP08887 468 aaPredicted RBP14.99□□□□□ -0.01
USP11-205ENST00000467378 NQO2P16083 231 aa14.99□□□□□ -0.01
USP11-205ENST00000467378 PRSS8Q16651 343 aa14.99□□□□□ -0.01
USP11-205ENST00000467378 OR5AU1Q8NGC0 362 aa14.99□□□□□ -0.01
USP11-205ENST00000467378 SCGB3A2Q96PL1 93 aa14.99□□□□□ -0.01
USP11-205ENST00000467378 OR2A7Q96R45 310 aa14.99□□□□□ -0.01
USP11-205ENST00000467378 AIFM2Q9BRQ8 373 aa14.99□□□□□ -0.01
USP11-205ENST00000467378 WDR12Q9GZL7 423 aaKnown RBP14.99□□□□□ -0.01
USP11-205ENST00000467378 COMMD9Q9P000 198 aa14.99□□□□□ -0.01
USP11-205ENST00000467378 C3orf85A0A1B0GTC6 90 aa14.98□□□□□ -0.01
USP11-205ENST00000467378 LINC00854A0A1B0GVQ3 168 aa14.98□□□□□ -0.01
USP11-205ENST00000467378 PSMB11A5LHX3 300 aa14.98□□□□□ -0.01
USP11-205ENST00000467378 PLA2G10O15496 165 aa14.98□□□□□ -0.01
USP11-205ENST00000467378 CRIP2P52943 208 aaPredicted RBP14.98□□□□□ -0.01
USP11-205ENST00000467378 FXYD3Q14802 87 aa14.98□□□□□ -0.01
USP11-205ENST00000467378 SSX9Q7RTT3 188 aa14.98□□□□□ -0.01
USP11-205ENST00000467378 VSTM2AQ8TAG5 236 aa14.98□□□□□ -0.01
USP11-205ENST00000467378 TMEM167AQ8TBQ9 72 aa14.98□□□□□ -0.01
USP11-205ENST00000467378 TP53RKQ96S44 253 aa14.98□□□□□ -0.01
USP11-205ENST00000467378 C7orf50Q9BRJ6 194 aaKnown RBP14.98□□□□□ -0.01
USP11-205ENST00000467378 ZNF430Q9H8G1 570 aaPredicted RBP14.98□□□□□ -0.01
USP11-205ENST00000467378 PARP11Q9NR21 331 aa14.98□□□□□ -0.01
USP11-205ENST00000467378 BET1LQ9NYM9 111 aa14.98□□□□□ -0.01
USP11-205ENST00000467378 NUBP2Q9Y5Y2 271 aa14.98□□□□□ -0.01
USP11-205ENST00000467378 H0Y980 276 aa14.97□□□□□ -0.01
USP11-205ENST00000467378 KBTBD11O94819 623 aa14.97□□□□□ -0.01
USP11-205ENST00000467378 IGKV1-39P01597 117 aa14.97□□□□□ -0.01
USP11-205ENST00000467378 IGKV1D-39P04432 117 aa14.97□□□□□ -0.01
USP11-205ENST00000467378 CD28P10747 220 aa14.97□□□□□ -0.01
USP11-205ENST00000467378 BTCP35070 178 aa14.97□□□□□ -0.01
USP11-205ENST00000467378 CFHR3Q02985 330 aa14.97□□□□□ -0.01
USP11-205ENST00000467378 OR4A47Q6IF82 309 aa14.97□□□□□ -0.01
USP11-205ENST00000467378 ZNF329Q86UD4 541 aa14.97□□□□□ -0.01
USP11-205ENST00000467378 ADAD2Q8NCV1 583 aaKnown RBP14.97□□□□□ -0.01
USP11-205ENST00000467378 TMEM230Q96A57 120 aa14.97□□□□□ -0.01
USP11-205ENST00000467378 R3HDM4Q96D70 268 aa14.97□□□□□ -0.01
USP11-205ENST00000467378 WWC2-AS2Q96NR7 200 aa14.97□□□□□ -0.01
USP11-205ENST00000467378 SLC25A21Q9BQT8 299 aaPredicted RBP14.97□□□□□ -0.01
USP11-205ENST00000467378 CRYM-AS1A6NIL9 109 aa14.96□□□□□ -0.01
USP11-205ENST00000467378 CENPXA8MT69 81 aa14.96□□□□□ -0.01
USP11-205ENST00000467378 G3V318 75 aa14.96□□□□□ -0.01
USP11-205ENST00000467378 PPIFP30405 207 aaKnown RBP14.96□□□□□ -0.01
USP11-205ENST00000467378 CCR6P51684 374 aa14.96□□□□□ -0.01
USP11-205ENST00000467378 C19orf54Q5BKX5 351 aa14.96□□□□□ -0.01
USP11-205ENST00000467378 TCTEX1D4Q5JR98 221 aa14.96□□□□□ -0.01
USP11-205ENST00000467378 MMD2Q8IY49 270 aa14.96□□□□□ -0.01
USP11-205ENST00000467378 CADM3Q8N126 398 aa14.96□□□□□ -0.01
USP11-205ENST00000467378 OR4A5Q8NH83 315 aa14.96□□□□□ -0.01
USP11-205ENST00000467378 FAM103A1Q9BTL3 118 aaKnown RBP14.96□□□□□ -0.01
USP11-205ENST00000467378 GON7Q9BXV9 100 aa14.96□□□□□ -0.01
USP11-205ENST00000467378 NAA60Q9H7X0 242 aa14.96□□□□□ -0.01
USP11-205ENST00000467378 WSB1Q9Y6I7 421 aa14.96□□□□□ -0.01
USP11-205ENST00000467378 TRAV41A0A0B4J266 112 aa14.95□□□□□ -0.02
USP11-205ENST00000467378 MARCH11A6NNE9 402 aa14.95□□□□□ -0.02
USP11-205ENST00000467378 FBXO24O75426 580 aa14.95□□□□□ -0.02
USP11-205ENST00000467378 CNIH1O95406 144 aa14.95□□□□□ -0.02
USP11-205ENST00000467378 VDAC1P21796 283 aa14.95□□□□□ -0.02
USP11-205ENST00000467378 UCP1P25874 307 aa14.95□□□□□ -0.02
USP11-205ENST00000467378 GNB1P62873 340 aa14.95□□□□□ -0.02
USP11-205ENST00000467378 SLC35B1P78383 322 aa14.95□□□□□ -0.02
USP11-205ENST00000467378 TNXAQ16473 311 aa14.95□□□□□ -0.02
USP11-205ENST00000467378 SP6Q3SY56 376 aa14.95□□□□□ -0.02
USP11-205ENST00000467378 DMBX1Q8NFW5 382 aa14.95□□□□□ -0.02
USP11-205ENST00000467378 ARPC1AQ92747 370 aa14.95□□□□□ -0.02
USP11-205ENST00000467378 TMEM140Q9NV12 185 aa14.95□□□□□ -0.02
USP11-205ENST00000467378 TRAV3A0A0B4J244 114 aa14.94□□□□□ -0.02
USP11-205ENST00000467378 TEX13DA0A0J9YY54 714 aaPredicted RBP14.94□□□□□ -0.02
USP11-205ENST00000467378 UPK2O00526 184 aa14.94□□□□□ -0.02
USP11-205ENST00000467378 LYRM1O43325 122 aa14.94□□□□□ -0.02
USP11-205ENST00000467378 CREBL2O60519 120 aaPredicted RBP14.94□□□□□ -0.02
USP11-205ENST00000467378 B3GALNT1O75752 331 aa14.94□□□□□ -0.02
USP11-205ENST00000467378 KRASP01116 189 aa14.94□□□□□ -0.02
USP11-205ENST00000467378 SERPINE2P07093 398 aa14.94□□□□□ -0.02
USP11-205ENST00000467378 RPA2P15927 270 aa14.94□□□□□ -0.02
USP11-205ENST00000467378 G6PCP35575 357 aa14.94□□□□□ -0.02
USP11-205ENST00000467378 CD83Q01151 205 aa14.94□□□□□ -0.02
USP11-205ENST00000467378 RBMS2Q15434 407 aaKnown RBP14.94□□□□□ -0.02
USP11-205ENST00000467378 AKIRIN2Q53H80 203 aa14.94□□□□□ -0.02
USP11-205ENST00000467378 MINDY2Q8NBR6 621 aa14.94□□□□□ -0.02
USP11-205ENST00000467378 ABHD5Q8WTS1 349 aa14.94□□□□□ -0.02
USP11-205ENST00000467378 GLYATL2Q8WU03 294 aa14.94□□□□□ -0.02
USP11-205ENST00000467378 SEC22AQ96IW7 307 aa14.94□□□□□ -0.02
USP11-205ENST00000467378 DNAH3Q8TD57 4116 aa14.94□□□□□ -0.02
USP11-205ENST00000467378 NDUFB6O95139 128 aa14.93□□□□□ -0.02
USP11-205ENST00000467378 IGHG4P01861 327 aa14.93□□□□□ -0.02
USP11-205ENST00000467378 OR5AC1P0C628 307 aa14.93□□□□□ -0.02
USP11-205ENST00000467378 AKR1C4P17516 323 aa14.93□□□□□ -0.02
USP11-205ENST00000467378 MAS1LP35410 378 aa14.93□□□□□ -0.02
USP11-205ENST00000467378 ERVK-16P61578 105 aa14.93□□□□□ -0.02
USP11-205ENST00000467378 TMEM267Q0VDI3 215 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms