RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 TMEM167AQ8TBQ9 72 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 FCAMRQ8WWV6 532 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 TMEM68Q96MH6 324 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 OR5B12Q96R08 314 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 OR2A7Q96R45 310 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 TINAGL1Q9GZM7 467 aaPredicted RBP10.02□□□□□ -0.81
COL5A1-206ENST00000465877 RSL24D1Q9UHA3 163 aaKnown RBP10.02□□□□□ -0.81
COL5A1-206ENST00000465877 H3BUA1 57 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 MPPED1O15442 326 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 WIPF1O43516 503 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 DUS4LO95620 317 aaKnown RBP10.01□□□□□ -0.81
COL5A1-206ENST00000465877 HPRT1P00492 218 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 TRGV3P03979 118 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 LGALS1P09382 135 aaKnown RBP10.01□□□□□ -0.81
COL5A1-206ENST00000465877 PPP5CP53041 499 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 TAS2R19P59542 299 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 SSBP1Q04837 148 aaKnown RBP10.01□□□□□ -0.81
COL5A1-206ENST00000465877 POU2AF1Q16633 256 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 PHLDA2Q53GA4 152 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 OR4A47Q6IF82 309 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 LHFPL1Q86WI0 220 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 SLC38A6Q8IZM9 456 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 TMEM229BQ8NBD8 167 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 OR11H1Q8NG94 326 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 OR4D10Q8NGI6 311 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 CD300LFQ8TDQ1 290 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 MS4A10Q96PG2 267 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 COA4Q9NYJ1 87 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 BET1LQ9NYM9 111 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 COMMD9Q9P000 198 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 RABL2AQ9UBK7 228 aaPredicted RBP10.01□□□□□ -0.81
COL5A1-206ENST00000465877 RABL2BQ9UNT1 228 aa10.01□□□□□ -0.81
COL5A1-206ENST00000465877 ZNF701M0R085 212 aaPredicted RBP10□□□□□ -0.81
COL5A1-206ENST00000465877 CTDSPLO15194 276 aa10□□□□□ -0.81
COL5A1-206ENST00000465877 PGLYRP1O75594 196 aaPredicted RBP10□□□□□ -0.81
COL5A1-206ENST00000465877 IGHV3-11P01762 117 aa10□□□□□ -0.81
COL5A1-206ENST00000465877 CD74P04233 296 aa10□□□□□ -0.81
COL5A1-206ENST00000465877 IFNA6P05013 189 aa10□□□□□ -0.81
COL5A1-206ENST00000465877 NQO2P16083 231 aa10□□□□□ -0.81
COL5A1-206ENST00000465877 F2RP25116 425 aa10□□□□□ -0.81
COL5A1-206ENST00000465877 S100GP29377 79 aa10□□□□□ -0.81
COL5A1-206ENST00000465877 RPL27AP46776 148 aaKnown RBP10□□□□□ -0.81
COL5A1-206ENST00000465877 ZNF616Q08AN1 781 aa10□□□□□ -0.81
COL5A1-206ENST00000465877 OR5T1Q8NG75 326 aa10□□□□□ -0.81
COL5A1-206ENST00000465877 SPIN2AQ99865 258 aa10□□□□□ -0.81
COL5A1-206ENST00000465877 SPIN2BQ9BPZ2 258 aa10□□□□□ -0.81
COL5A1-206ENST00000465877 AIFM2Q9BRQ8 373 aa10□□□□□ -0.81
COL5A1-206ENST00000465877 RSRP1Q9BUV0 290 aa10□□□□□ -0.81
COL5A1-206ENST00000465877 GPR61Q9BZJ8 451 aa10□□□□□ -0.81
COL5A1-206ENST00000465877 ALX4Q9H161 411 aaPredicted RBP10□□□□□ -0.81
COL5A1-206ENST00000465877 PLEKHA2Q9HB19 425 aa10□□□□□ -0.81
COL5A1-206ENST00000465877 SLC2A9Q9NRM0 540 aa10□□□□□ -0.81
COL5A1-206ENST00000465877 ZNF355PQ9NSJ1 428 aa10□□□□□ -0.81
COL5A1-206ENST00000465877 TMEM140Q9NV12 185 aa10□□□□□ -0.81
COL5A1-206ENST00000465877 MSGN1A6NI15 193 aa9.99□□□□□ -0.81
COL5A1-206ENST00000465877 MARCH11A6NNE9 402 aa9.99□□□□□ -0.81
COL5A1-206ENST00000465877 TEX22C9J3V5 150 aa9.99□□□□□ -0.81
COL5A1-206ENST00000465877 RAB3DO95716 219 aa9.99□□□□□ -0.81
COL5A1-206ENST00000465877 OR8U8P0C7N1 319 aa9.99□□□□□ -0.81
COL5A1-206ENST00000465877 OR9G9P0C7N8 305 aa9.99□□□□□ -0.81
COL5A1-206ENST00000465877 MAS1LP35410 378 aa9.99□□□□□ -0.81
COL5A1-206ENST00000465877 UCP3P55916 312 aa9.99□□□□□ -0.81
COL5A1-206ENST00000465877 RPL8P62917 257 aaKnown RBP9.99□□□□□ -0.81
COL5A1-206ENST00000465877 DEFA5Q01523 94 aa9.99□□□□□ -0.81
COL5A1-206ENST00000465877 FOXB2Q5VYV0 432 aa9.99□□□□□ -0.81
COL5A1-206ENST00000465877 FAAP20Q6NZ36 180 aa9.99□□□□□ -0.81
COL5A1-206ENST00000465877 STEAP1BQ6NZ63 245 aa9.99□□□□□ -0.81
COL5A1-206ENST00000465877 LPCAT3Q6P1A2 487 aa9.99□□□□□ -0.81
COL5A1-206ENST00000465877 TBC1D26Q86UD7 250 aa9.99□□□□□ -0.81
COL5A1-206ENST00000465877 ADAD2Q8NCV1 583 aaKnown RBP9.99□□□□□ -0.81
COL5A1-206ENST00000465877 DMBX1Q8NFW5 382 aa9.99□□□□□ -0.81
COL5A1-206ENST00000465877 OR4A5Q8NH83 315 aa9.99□□□□□ -0.81
COL5A1-206ENST00000465877 DGCR14Q96DF8 476 aaKnown RBP9.99□□□□□ -0.81
COL5A1-206ENST00000465877 MCRIP2Q9BUT9 160 aaKnown RBP9.99□□□□□ -0.81
COL5A1-206ENST00000465877 HRASLSQ9HDD0 168 aa9.99□□□□□ -0.81
COL5A1-206ENST00000465877 IGHV4OR15-8A0A075B7B6 117 aa9.98□□□□□ -0.81
COL5A1-206ENST00000465877 A0A087WW49 117 aa9.98□□□□□ -0.81
COL5A1-206ENST00000465877 BRI3O95415 125 aa9.98□□□□□ -0.81
COL5A1-206ENST00000465877 PRB2P02812 416 aaPredicted RBP9.98□□□□□ -0.81
COL5A1-206ENST00000465877 ZNF735P0CB33 412 aa9.98□□□□□ -0.81
COL5A1-206ENST00000465877 MYOD1P15172 320 aa9.98□□□□□ -0.81
COL5A1-206ENST00000465877 PGAM2P15259 253 aa9.98□□□□□ -0.81
COL5A1-206ENST00000465877 HLA-GP17693 338 aa9.98□□□□□ -0.81
COL5A1-206ENST00000465877 TNFSF8P32971 234 aa9.98□□□□□ -0.81
COL5A1-206ENST00000465877 ERVK-16P61578 105 aa9.98□□□□□ -0.81
COL5A1-206ENST00000465877 PDLIM3Q53GG5 364 aaPredicted RBP9.98□□□□□ -0.81
COL5A1-206ENST00000465877 OR1N2Q8NGR9 330 aa9.98□□□□□ -0.81
COL5A1-206ENST00000465877 DPF1Q92782 380 aa9.98□□□□□ -0.81
COL5A1-206ENST00000465877 ZNF486Q96H40 463 aaPredicted RBP9.98□□□□□ -0.81
COL5A1-206ENST00000465877 TGP01266 2768 aa9.98□□□□□ -0.81
COL5A1-206ENST00000465877 TRAV3A0A0B4J244 114 aa9.97□□□□□ -0.81
COL5A1-206ENST00000465877 C13orf42A0A1B0GVH6 325 aa9.97□□□□□ -0.81
COL5A1-206ENST00000465877 A0A1B0GW64 132 aa9.97□□□□□ -0.81
COL5A1-206ENST00000465877 HMX3A6NHT5 357 aa9.97□□□□□ -0.81
COL5A1-206ENST00000465877 E7EUB6 86 aa9.97□□□□□ -0.81
COL5A1-206ENST00000465877 LINC01619G3V211 115 aa9.97□□□□□ -0.81
COL5A1-206ENST00000465877 GSTZ1O43708 216 aaPredicted RBP9.97□□□□□ -0.81
COL5A1-206ENST00000465877 AKAIN1P0CW23 69 aa9.97□□□□□ -0.81
COL5A1-206ENST00000465877 RPA2P15927 270 aa9.97□□□□□ -0.81
COL5A1-206ENST00000465877 HOXD3P31249 432 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms