RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ZNF818PQ6ZRF7 136 aa16.68■□□□□ 0.26
LIME1-203ENST00000465591 SSX9Q7RTT3 188 aa16.68■□□□□ 0.26
LIME1-203ENST00000465591 TMEM17Q86X19 198 aa16.68■□□□□ 0.26
LIME1-203ENST00000465591 ISOC1Q96CN7 298 aa16.68■□□□□ 0.26
LIME1-203ENST00000465591 OR2A7Q96R45 310 aa16.68■□□□□ 0.26
LIME1-203ENST00000465591 AKIP1Q9NQ31 210 aa16.68■□□□□ 0.26
LIME1-203ENST00000465591 COMMD3Q9UBI1 195 aa16.68■□□□□ 0.26
LIME1-203ENST00000465591 SULT1C2O00338 296 aa16.67■□□□□ 0.26
LIME1-203ENST00000465591 CREBL2O60519 120 aaPredicted RBP16.67■□□□□ 0.26
LIME1-203ENST00000465591 ACTL6BO94805 426 aa16.67■□□□□ 0.26
LIME1-203ENST00000465591 ZNF182P17025 639 aaPredicted RBP16.67■□□□□ 0.26
LIME1-203ENST00000465591 SPCS2Q15005 226 aa16.67■□□□□ 0.26
LIME1-203ENST00000465591 MZT2AQ6P582 158 aa16.67■□□□□ 0.26
LIME1-203ENST00000465591 SPAG16Q8N0X2 631 aa16.67■□□□□ 0.26
LIME1-203ENST00000465591 TTC9CQ8N5M4 171 aa16.67■□□□□ 0.26
LIME1-203ENST00000465591 ZBTB34Q8NCN2 500 aa16.67■□□□□ 0.26
LIME1-203ENST00000465591 USMG5Q96IX5 58 aa16.67■□□□□ 0.26
LIME1-203ENST00000465591 SPIN2AQ99865 258 aa16.67■□□□□ 0.26
LIME1-203ENST00000465591 SPIN2BQ9BPZ2 258 aa16.67■□□□□ 0.26
LIME1-203ENST00000465591 EHFQ9NZC4 300 aa16.67■□□□□ 0.26
LIME1-203ENST00000465591 CEPT1Q9Y6K0 416 aa16.67■□□□□ 0.26
LIME1-203ENST00000465591 TRBV9A0A0B4J1U6 114 aa16.66■□□□□ 0.26
LIME1-203ENST00000465591 PMP2P02689 132 aa16.66■□□□□ 0.26
LIME1-203ENST00000465591 NAT1P18440 290 aa16.66■□□□□ 0.26
LIME1-203ENST00000465591 ZP3P21754 424 aa16.66■□□□□ 0.26
LIME1-203ENST00000465591 RHOGP84095 191 aa16.66■□□□□ 0.26
LIME1-203ENST00000465591 KLF5Q13887 457 aaPredicted RBP16.66■□□□□ 0.26
LIME1-203ENST00000465591 PEF1Q9UBV8 284 aaKnown RBP16.66■□□□□ 0.26
LIME1-203ENST00000465591 H3BMQ9 156 aa16.65■□□□□ 0.26
LIME1-203ENST00000465591 GNRHRP30968 328 aa16.65■□□□□ 0.26
LIME1-203ENST00000465591 KIR2DS2P43631 304 aa16.65■□□□□ 0.26
LIME1-203ENST00000465591 RPL27AP46776 148 aaKnown RBP16.65■□□□□ 0.26
LIME1-203ENST00000465591 DHRS11Q6UWP2 260 aa16.65■□□□□ 0.26
LIME1-203ENST00000465591 IL34Q6ZMJ4 242 aa16.65■□□□□ 0.26
LIME1-203ENST00000465591 LYSMD2Q8IV50 215 aa16.65■□□□□ 0.26
LIME1-203ENST00000465591 VSTM2AQ8TAG5 236 aa16.65■□□□□ 0.26
LIME1-203ENST00000465591 CMTM3Q96MX0 182 aa16.65■□□□□ 0.26
LIME1-203ENST00000465591 OR4C12Q96R67 309 aa16.65■□□□□ 0.26
LIME1-203ENST00000465591 HUWE1Q7Z6Z7 4374 aaKnown RBP16.65■□□□□ 0.26
LIME1-203ENST00000465591 TRAV3A0A0B4J244 114 aa16.64■□□□□ 0.25
LIME1-203ENST00000465591 CGB1A6NKQ9 187 aa16.64■□□□□ 0.25
LIME1-203ENST00000465591 HRASP01112 189 aa16.64■□□□□ 0.25
LIME1-203ENST00000465591 GP9P14770 177 aa16.64■□□□□ 0.25
LIME1-203ENST00000465591 PRSS3P35030 304 aa16.64■□□□□ 0.25
LIME1-203ENST00000465591 SYNJ2BPP57105 145 aa16.64■□□□□ 0.25
LIME1-203ENST00000465591 OR4A47Q6IF82 309 aa16.64■□□□□ 0.25
LIME1-203ENST00000465591 OR6Q1Q8NGQ2 317 aa16.64■□□□□ 0.25
LIME1-203ENST00000465591 OR51H1Q8NH63 302 aa16.64■□□□□ 0.25
LIME1-203ENST00000465591 GPX8Q8TED1 209 aa16.64■□□□□ 0.25
LIME1-203ENST00000465591 FYTTD1Q96QD9 318 aaKnown RBP16.64■□□□□ 0.25
LIME1-203ENST00000465591 ASCL2Q99929 193 aa16.64■□□□□ 0.25
LIME1-203ENST00000465591 ZNF2Q9BSG1 426 aaPredicted RBP16.64■□□□□ 0.25
LIME1-203ENST00000465591 NDUFA13Q9P0J0 144 aa16.64■□□□□ 0.25
LIME1-203ENST00000465591 RBFOX2O43251 390 aaKnown RBP eCLIP16.63■□□□□ 0.25
LIME1-203ENST00000465591 HPGDSO60760 199 aa16.63■□□□□ 0.25
LIME1-203ENST00000465591 OR2J3O76001 311 aa16.63■□□□□ 0.25
LIME1-203ENST00000465591 APOA1P02647 267 aa16.63■□□□□ 0.25
LIME1-203ENST00000465591 ZNF735P0CB33 412 aa16.63■□□□□ 0.25
LIME1-203ENST00000465591 AREGP15514 252 aa16.63■□□□□ 0.25
LIME1-203ENST00000465591 ELK1P19419 428 aa16.63■□□□□ 0.25
LIME1-203ENST00000465591 HERV-K104P61576 105 aa16.63■□□□□ 0.25
LIME1-203ENST00000465591 EXOSC2Q13868 293 aaKnown RBP16.63■□□□□ 0.25
LIME1-203ENST00000465591 OR5H2Q8NGV7 314 aa16.63■□□□□ 0.25
LIME1-203ENST00000465591 MOB3AQ96BX8 217 aa16.63■□□□□ 0.25
LIME1-203ENST00000465591 RSRP1Q9BUV0 290 aa16.63■□□□□ 0.25
LIME1-203ENST00000465591 FXYD6Q9H0Q3 95 aa16.63■□□□□ 0.25
LIME1-203ENST00000465591 BET1LQ9NYM9 111 aa16.63■□□□□ 0.25
LIME1-203ENST00000465591 RSL24D1Q9UHA3 163 aaKnown RBP16.63■□□□□ 0.25
LIME1-203ENST00000465591 SMIM31A0A1B0GVY4 71 aa16.62■□□□□ 0.25
LIME1-203ENST00000465591 FAM223BA6NKX1 122 aa16.62■□□□□ 0.25
LIME1-203ENST00000465591 ZNF701M0R085 212 aaPredicted RBP16.62■□□□□ 0.25
LIME1-203ENST00000465591 BMPR1BO00238 502 aa16.62■□□□□ 0.25
LIME1-203ENST00000465591 IGLV1-51P01701 117 aa16.62■□□□□ 0.25
LIME1-203ENST00000465591 HLA-DMAP28067 261 aa16.62■□□□□ 0.25
LIME1-203ENST00000465591 MAS1LP35410 378 aa16.62■□□□□ 0.25
LIME1-203ENST00000465591 RPL8P62917 257 aaKnown RBP16.62■□□□□ 0.25
LIME1-203ENST00000465591 CATR1Q13166 79 aa16.62■□□□□ 0.25
LIME1-203ENST00000465591 AADACL3Q5VUY0 350 aa16.62■□□□□ 0.25
LIME1-203ENST00000465591 SNX29P2Q8IUI4 249 aa16.62■□□□□ 0.25
LIME1-203ENST00000465591 FAM223AQ8IWN6 122 aa16.62■□□□□ 0.25
LIME1-203ENST00000465591 OR9G4Q8NGQ1 327 aa16.62■□□□□ 0.25
LIME1-203ENST00000465591 DYNC2LI1Q8TCX1 351 aa16.62■□□□□ 0.25
LIME1-203ENST00000465591 ELOVL1Q9BW60 279 aa16.62■□□□□ 0.25
LIME1-203ENST00000465591 SLC2A9Q9NRM0 540 aa16.62■□□□□ 0.25
LIME1-203ENST00000465591 CCDC59Q9P031 241 aaKnown RBP16.62■□□□□ 0.25
LIME1-203ENST00000465591 SMAD5-AS1Q9Y6J3 95 aa16.62■□□□□ 0.25
LIME1-203ENST00000465591 STAB2Q8WWQ8 2551 aa16.62■□□□□ 0.25
LIME1-203ENST00000465591 S1PR2O95136 353 aa16.61■□□□□ 0.25
LIME1-203ENST00000465591 HLA-GP17693 338 aa16.61■□□□□ 0.25
LIME1-203ENST00000465591 HRH1P35367 487 aa16.61■□□□□ 0.25
LIME1-203ENST00000465591 TAS2R46P59540 309 aa16.61■□□□□ 0.25
LIME1-203ENST00000465591 ATP5G2Q06055 141 aa16.61■□□□□ 0.25
LIME1-203ENST00000465591 POU2AF1Q16633 256 aa16.61■□□□□ 0.25
LIME1-203ENST00000465591 FANCD2OSQ96PS1 177 aa16.61■□□□□ 0.25
LIME1-203ENST00000465591 RBM38Q9H0Z9 239 aaKnown RBP16.61■□□□□ 0.25
LIME1-203ENST00000465591 ZNF257Q9Y2Q1 563 aa16.61■□□□□ 0.25
LIME1-203ENST00000465591 NPIPB5A8MRT5 1133 aa16.6■□□□□ 0.25
LIME1-203ENST00000465591 HPRT1P00492 218 aa16.6■□□□□ 0.25
LIME1-203ENST00000465591 RLN1P04808 185 aa16.6■□□□□ 0.25
LIME1-203ENST00000465591 RPA2P15927 270 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms