RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 RAB25P57735 213 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 TAS2R31P59538 309 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 DGCR2P98153 550 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 MEF2DQ14814 521 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 AKIRIN2Q53H80 203 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 C10orf99Q6UWK7 81 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 SLC38A6Q8IZM9 456 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 GDPD1Q8N9F7 314 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 OR5M8Q8NGP6 311 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 MYOZ3Q8TDC0 251 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 RBMXL1Q96E39 390 aaKnown RBP9.3□□□□□ -0.92
VPS52-213ENST00000461743 TPSG1Q9NRR2 321 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 FAM212BQ9NTI7 297 aaPredicted RBP9.3□□□□□ -0.92
VPS52-213ENST00000461743 COMMD9Q9P000 198 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 KLK11Q9UBX7 282 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 FOXA2Q9Y261 457 aaPredicted RBP9.3□□□□□ -0.92
VPS52-213ENST00000461743 BOLA1Q9Y3E2 137 aa9.3□□□□□ -0.92
VPS52-213ENST00000461743 H3BUA1 57 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 KBTBD11O94819 623 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 HPRT1P00492 218 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 SAA1P0DJI8 122 aaPredicted RBP9.29□□□□□ -0.92
VPS52-213ENST00000461743 ECI1P42126 302 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 POU2AF1Q16633 256 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 PRSS8Q16651 343 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 ECSCRQ19T08 205 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 Q5BKY6 102 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 AADACL3Q5VUY0 350 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 LHFPL1Q86WI0 220 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 MMD2Q8IY49 270 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 SPAG16Q8N0X2 631 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 OR4A5Q8NH83 315 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 ABHD5Q8WTS1 349 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 R3HDM4Q96D70 268 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 RSRP1Q9BUV0 290 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 PLEKHA2Q9HB19 425 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 RANGRFQ9HD47 186 aaPredicted RBP9.29□□□□□ -0.92
VPS52-213ENST00000461743 NUBP2Q9Y5Y2 271 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 MEGF8Q7Z7M0 2845 aa9.29□□□□□ -0.92
VPS52-213ENST00000461743 NOTCH3Q9UM47 2321 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 LINC00862A6NCI5 91 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 SRRM4A7MD48 611 aaKnown RBP9.28□□□□□ -0.92
VPS52-213ENST00000461743 FCN1O00602 326 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 TNFSF12O43508 249 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 CNIH1O95406 144 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 BRI3O95415 125 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 CD3DP04234 171 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 RLN1P04808 185 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 MAS1LP35410 378 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 CDX1P47902 265 aaPredicted RBP9.28□□□□□ -0.92
VPS52-213ENST00000461743 BRWD1-AS2P59051 145 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 SSBP2P81877 361 aaPredicted RBP9.28□□□□□ -0.92
VPS52-213ENST00000461743 FXYD3Q14802 87 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 RNASE12Q5GAN4 147 aaKnown RBP9.28□□□□□ -0.92
VPS52-213ENST00000461743 OR2B11Q5JQS5 317 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 STEAP1BQ6NZ63 245 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 ZNF695Q8IW36 515 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 PUSL1Q8N0Z8 303 aaKnown RBP9.28□□□□□ -0.92
VPS52-213ENST00000461743 KLHL30-AS1Q8NEE0 82 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 FAM110DQ8TAY7 271 aaPredicted RBP9.28□□□□□ -0.92
VPS52-213ENST00000461743 TMEM167AQ8TBQ9 72 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 DEDD2Q8WXF8 326 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 RHOVQ96L33 236 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 SOSTQ9BQB4 213 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 BET1LQ9NYM9 111 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 FBXO7Q9Y3I1 522 aa9.28□□□□□ -0.92
VPS52-213ENST00000461743 A0A1W2PN81 502 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 A0A1W2PRX2 142 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 FABP12A6NFH5 140 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 NUDT19A8MXV4 375 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 G3V318 75 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 M0QYG6 137 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 ARPC1BO15143 372 aaKnown RBP9.27□□□□□ -0.93
VPS52-213ENST00000461743 ACTL6BO94805 426 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 OR2A4O95047 310 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 RAB3DO95716 219 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 PF4P02776 101 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 RPLP1P05386 114 aaKnown RBP9.27□□□□□ -0.93
VPS52-213ENST00000461743 AKAIN1P0CW23 69 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 NQO2P16083 231 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 F2RP25116 425 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 CHRNA7P36544 502 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 RND3P61587 244 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 ZNF79Q15937 498 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 TMEM65Q6PI78 240 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 UNQ5815/PRO19632Q6UWF5 114 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 OR51H1Q8NH63 302 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 ENKURQ8TC29 256 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 C4orf3Q8WVX3 66 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 UBE2E2Q96LR5 201 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 OR2A7Q96R45 310 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 CLCC1Q96S66 551 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 TINAGL1Q9GZM7 467 aaPredicted RBP9.27□□□□□ -0.93
VPS52-213ENST00000461743 ZNF430Q9H8G1 570 aaPredicted RBP9.27□□□□□ -0.93
VPS52-213ENST00000461743 WSB1Q9Y6I7 421 aa9.27□□□□□ -0.93
VPS52-213ENST00000461743 DISC1C4P0D8 188 aa9.26□□□□□ -0.93
VPS52-213ENST00000461743 RAMP3O60896 148 aa9.26□□□□□ -0.93
VPS52-213ENST00000461743 PGLYRP1O75594 196 aaPredicted RBP9.26□□□□□ -0.93
VPS52-213ENST00000461743 EGR2P11161 476 aaPredicted RBP9.26□□□□□ -0.93
VPS52-213ENST00000461743 CTRB1P17538 263 aa9.26□□□□□ -0.93
VPS52-213ENST00000461743 GNB1P62873 340 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms