RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 LCN2P80188 198 aa10.32□□□□□ -0.76
ECHDC1-209ENST00000454591 SSX2Q16385 188 aa10.32□□□□□ -0.76
ECHDC1-209ENST00000454591 CT45A1Q5HYN5 189 aa10.32□□□□□ -0.76
ECHDC1-209ENST00000454591 PYY3Q5JQD4 70 aa10.32□□□□□ -0.76
ECHDC1-209ENST00000454591 ZNF788Q6ZQV5 615 aa10.32□□□□□ -0.76
ECHDC1-209ENST00000454591 CT45A3Q8NHU0 189 aa10.32□□□□□ -0.76
ECHDC1-209ENST00000454591 TMEM170AQ8WVE7 144 aa10.32□□□□□ -0.76
ECHDC1-209ENST00000454591 RPUSD4Q96CM3 377 aaKnown RBP10.32□□□□□ -0.76
ECHDC1-209ENST00000454591 OR5B12Q96R08 314 aa10.32□□□□□ -0.76
ECHDC1-209ENST00000454591 TMEM204Q9BSN7 226 aa10.32□□□□□ -0.76
ECHDC1-209ENST00000454591 NPVFQ9HCQ7 196 aa10.32□□□□□ -0.76
ECHDC1-209ENST00000454591 HEYLQ9NQ87 328 aaPredicted RBP10.32□□□□□ -0.76
ECHDC1-209ENST00000454591 ZNF257Q9Y2Q1 563 aa10.32□□□□□ -0.76
ECHDC1-209ENST00000454591 NCOR1O75376 2440 aa10.32□□□□□ -0.76
ECHDC1-209ENST00000454591 CACNA1DQ01668 2161 aa10.31□□□□□ -0.76
ECHDC1-209ENST00000454591 C11orf94C9JXX5 98 aa10.31□□□□□ -0.76
ECHDC1-209ENST00000454591 RRHO14718 337 aa10.31□□□□□ -0.76
ECHDC1-209ENST00000454591 IFNA10P01566 189 aa10.31□□□□□ -0.76
ECHDC1-209ENST00000454591 SOD3P08294 240 aa10.31□□□□□ -0.76
ECHDC1-209ENST00000454591 GALR1P47211 349 aa10.31□□□□□ -0.76
ECHDC1-209ENST00000454591 FAM3BP58499 235 aaPredicted RBP10.31□□□□□ -0.76
ECHDC1-209ENST00000454591 KRTCAP3Q53RY4 240 aa10.31□□□□□ -0.76
ECHDC1-209ENST00000454591 RPL39P5Q59GN2 51 aa10.31□□□□□ -0.76
ECHDC1-209ENST00000454591 SSX8Q7RTT4 187 aa10.31□□□□□ -0.76
ECHDC1-209ENST00000454591 ZNRF1Q8ND25 227 aa10.31□□□□□ -0.76
ECHDC1-209ENST00000454591 OR4X1Q8NH49 305 aa10.31□□□□□ -0.76
ECHDC1-209ENST00000454591 C1orf159Q96HA4 380 aa10.31□□□□□ -0.76
ECHDC1-209ENST00000454591 GAFA1Q96PS6 74 aa10.31□□□□□ -0.76
ECHDC1-209ENST00000454591 MGST2Q99735 147 aa10.31□□□□□ -0.76
ECHDC1-209ENST00000454591 IDI2-AS1Q9NZ38 188 aa10.31□□□□□ -0.76
ECHDC1-209ENST00000454591 DSCAMO60469 2012 aa10.31□□□□□ -0.76
ECHDC1-209ENST00000454591 DOCK11Q5JSL3 2073 aa10.31□□□□□ -0.76
ECHDC1-209ENST00000454591 TRGV10A0A0A0MS01 117 aa10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 A0A1W2PPV4 95 aa10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 SLC31A2O15432 143 aa10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 CXorf1O96002 111 aa10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 RPL29P47914 159 aaKnown RBP10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 PDLIM4P50479 330 aa10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 SELENOVP59797 346 aa10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 SPRNQ5BIV9 151 aa10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 C1orf229Q6ZS94 237 aaPredicted RBP10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 TCF23Q7RTU1 214 aa10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 LURAP1LQ8IV03 231 aa10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 TMEM183AQ8IXX5 376 aa10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 CISD2Q8N5K1 135 aaKnown RBP10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 FAM57AQ8TBR7 257 aa10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 RNASEH2CQ8TDP1 164 aaKnown RBP10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 GATAD1Q8WUU5 269 aa10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 ACY3Q96HD9 319 aa10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 MS4A5Q9H3V2 200 aa10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 GCM1Q9NP62 436 aa10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 LY96Q9Y6Y9 160 aa10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 DIDO1Q9BTC0 2240 aaKnown RBP10.3□□□□□ -0.76
ECHDC1-209ENST00000454591 FREM2Q5SZK8 3169 aa10.29□□□□□ -0.76
ECHDC1-209ENST00000454591 IGHV3OR15-7A0A075B7D8 119 aa10.29□□□□□ -0.76
ECHDC1-209ENST00000454591 SAA2-SAA4A0A096LPE2 208 aa10.29□□□□□ -0.76
ECHDC1-209ENST00000454591 IGHV1-46P01743 117 aa10.29□□□□□ -0.76
ECHDC1-209ENST00000454591 SAA2P0DJI9 122 aaPredicted RBP10.29□□□□□ -0.76
ECHDC1-209ENST00000454591 TNFSF4P23510 183 aa10.29□□□□□ -0.76
ECHDC1-209ENST00000454591 EDDM3BP56851 147 aa10.29□□□□□ -0.76
ECHDC1-209ENST00000454591 GNB1P62873 340 aa10.29□□□□□ -0.76
ECHDC1-209ENST00000454591 SPINK9Q5DT21 86 aa10.29□□□□□ -0.76
ECHDC1-209ENST00000454591 SLC25A48Q6ZT89 311 aaKnown RBP10.29□□□□□ -0.76
ECHDC1-209ENST00000454591 LINC01551Q86U37 167 aa10.29□□□□□ -0.76
ECHDC1-209ENST00000454591 NEUROG1Q92886 237 aa10.29□□□□□ -0.76
ECHDC1-209ENST00000454591 C11orf52Q96A22 123 aa10.29□□□□□ -0.76
ECHDC1-209ENST00000454591 RHOVQ96L33 236 aa10.29□□□□□ -0.76
ECHDC1-209ENST00000454591 RPUSD1Q9UJJ7 312 aaKnown RBP10.29□□□□□ -0.76
ECHDC1-209ENST00000454591 PRNDQ9UKY0 176 aa10.29□□□□□ -0.76
ECHDC1-209ENST00000454591 PXMP4Q9Y6I8 212 aa10.29□□□□□ -0.76
ECHDC1-209ENST00000454591 TRAV9-1A0A075B6T8 112 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 TRAV3A0A0B4J244 114 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 A8MXE2 369 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 INS-IGF2F8WCM5 200 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 HMGB3O15347 200 aaKnown RBP10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 AREGP15514 252 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 HIST1H1BP16401 226 aaKnown RBP10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 NPY1RP25929 384 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 MRPS11P82912 194 aaKnown RBP10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 PRR20EP86478 221 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 PRR20CP86479 221 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 PRR20DP86480 221 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 PRR20BP86481 221 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 PRR20AP86496 221 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 TNFAIP6P98066 277 aaPredicted RBP10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 MEF2CQ06413 473 aaPredicted RBP10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 FOXL1Q12952 345 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 LTC4SQ16873 150 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 OR4A47Q6IF82 309 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 TMEM144Q7Z5S9 345 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 PNKDQ8N490 385 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 ZNF383Q8NA42 475 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 OR2T10Q8NGZ9 312 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 GPR61Q9BZJ8 451 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 SLC25A10Q9UBX3 287 aaPredicted RBP10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 PRR14LQ5THK1 2151 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 RAI1Q7Z5J4 1906 aaPredicted RBP10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 CUL9Q8IWT3 2517 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 PPP5D1E7EU14 171 aa10.28□□□□□ -0.76
ECHDC1-209ENST00000454591 SPRY3O43610 288 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms