RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 TMEM167AQ8TBQ9 72 aa12.56□□□□□ -0.4
NCKIPSD-208ENST00000454134 IFT46Q9NQC8 304 aa12.56□□□□□ -0.4
NCKIPSD-208ENST00000454134 TRBV9A0A0B4J1U6 114 aa12.55□□□□□ -0.4
NCKIPSD-208ENST00000454134 A0A1B0GW64 132 aa12.55□□□□□ -0.4
NCKIPSD-208ENST00000454134 FAM223BA6NKX1 122 aa12.55□□□□□ -0.4
NCKIPSD-208ENST00000454134 OR2J3O76001 311 aa12.55□□□□□ -0.4
NCKIPSD-208ENST00000454134 HRASP01112 189 aa12.55□□□□□ -0.4
NCKIPSD-208ENST00000454134 IL6RP08887 468 aaPredicted RBP12.55□□□□□ -0.4
NCKIPSD-208ENST00000454134 FRMD6-AS1P0C7T7 363 aa12.55□□□□□ -0.4
NCKIPSD-208ENST00000454134 RPL27AP46776 148 aaKnown RBP12.55□□□□□ -0.4
NCKIPSD-208ENST00000454134 TAS2R20P59543 309 aa12.55□□□□□ -0.4
NCKIPSD-208ENST00000454134 RPEL1Q2QD12 228 aa12.55□□□□□ -0.4
NCKIPSD-208ENST00000454134 TMEM69Q5SWH9 247 aa12.55□□□□□ -0.4
NCKIPSD-208ENST00000454134 TMEM17Q86X19 198 aa12.55□□□□□ -0.4
NCKIPSD-208ENST00000454134 FAM223AQ8IWN6 122 aa12.55□□□□□ -0.4
NCKIPSD-208ENST00000454134 SPAG16Q8N0X2 631 aa12.55□□□□□ -0.4
NCKIPSD-208ENST00000454134 EHFQ9NZC4 300 aa12.55□□□□□ -0.4
NCKIPSD-208ENST00000454134 BMPR1BO00238 502 aa12.54□□□□□ -0.4
NCKIPSD-208ENST00000454134 AREGP15514 252 aa12.54□□□□□ -0.4
NCKIPSD-208ENST00000454134 KIR2DS2P43631 304 aa12.54□□□□□ -0.4
NCKIPSD-208ENST00000454134 RFX2P48378 723 aa12.54□□□□□ -0.4
NCKIPSD-208ENST00000454134 NCS1P62166 190 aa12.54□□□□□ -0.4
NCKIPSD-208ENST00000454134 MSMO1Q15800 293 aa12.54□□□□□ -0.4
NCKIPSD-208ENST00000454134 ZNF818PQ6ZRF7 136 aa12.54□□□□□ -0.4
NCKIPSD-208ENST00000454134 SLC25A42Q86VD7 318 aa12.54□□□□□ -0.4
NCKIPSD-208ENST00000454134 NECAP1Q8NC96 275 aa12.54□□□□□ -0.4
NCKIPSD-208ENST00000454134 ZBTB34Q8NCN2 500 aa12.54□□□□□ -0.4
NCKIPSD-208ENST00000454134 OR51H1Q8NH63 302 aa12.54□□□□□ -0.4
NCKIPSD-208ENST00000454134 GIMAP1Q8WWP7 306 aa12.54□□□□□ -0.4
NCKIPSD-208ENST00000454134 DPPA5A6NC42 116 aa12.53□□□□□ -0.4
NCKIPSD-208ENST00000454134 PMP2P02689 132 aa12.53□□□□□ -0.4
NCKIPSD-208ENST00000454134 CSN3P07498 182 aa12.53□□□□□ -0.4
NCKIPSD-208ENST00000454134 ZNF735P0CB33 412 aa12.53□□□□□ -0.4
NCKIPSD-208ENST00000454134 MAS1LP35410 378 aa12.53□□□□□ -0.4
NCKIPSD-208ENST00000454134 HERV-K104P61576 105 aa12.53□□□□□ -0.4
NCKIPSD-208ENST00000454134 TATDN3Q17R31 274 aa12.53□□□□□ -0.4
NCKIPSD-208ENST00000454134 C15orf32Q32M92 178 aa12.53□□□□□ -0.4
NCKIPSD-208ENST00000454134 OR4A47Q6IF82 309 aa12.53□□□□□ -0.4
NCKIPSD-208ENST00000454134 Q8N1Y9 231 aa12.53□□□□□ -0.4
NCKIPSD-208ENST00000454134 SLC25A46Q96AG3 418 aa12.53□□□□□ -0.4
NCKIPSD-208ENST00000454134 FUNDC2Q9BWH2 189 aa12.53□□□□□ -0.4
NCKIPSD-208ENST00000454134 HRASLSQ9HDD0 168 aa12.53□□□□□ -0.4
NCKIPSD-208ENST00000454134 SLC2A9Q9NRM0 540 aa12.53□□□□□ -0.4
NCKIPSD-208ENST00000454134 FBXL7Q9UJT9 491 aa12.53□□□□□ -0.4
NCKIPSD-208ENST00000454134 ZNF257Q9Y2Q1 563 aa12.53□□□□□ -0.4
NCKIPSD-208ENST00000454134 TENM3Q9P273 2699 aa12.53□□□□□ -0.4
NCKIPSD-208ENST00000454134 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.52□□□□□ -0.41
NCKIPSD-208ENST00000454134 TRAV3A0A0B4J244 114 aa12.52□□□□□ -0.41
NCKIPSD-208ENST00000454134 CGB1A6NKQ9 187 aa12.52□□□□□ -0.41
NCKIPSD-208ENST00000454134 NPIPB5A8MRT5 1133 aa12.52□□□□□ -0.41
NCKIPSD-208ENST00000454134 PPP5D1E7EU14 171 aa12.52□□□□□ -0.41
NCKIPSD-208ENST00000454134 IGHV3-23P01764 117 aa12.52□□□□□ -0.41
NCKIPSD-208ENST00000454134 REG1AP05451 166 aa12.52□□□□□ -0.41
NCKIPSD-208ENST00000454134 EIF4EP06730 217 aaKnown RBP12.52□□□□□ -0.41
NCKIPSD-208ENST00000454134 HLA-GP17693 338 aa12.52□□□□□ -0.41
NCKIPSD-208ENST00000454134 GNRHRP30968 328 aa12.52□□□□□ -0.41
NCKIPSD-208ENST00000454134 VBP1P61758 197 aa12.52□□□□□ -0.41
NCKIPSD-208ENST00000454134 RPL8P62917 257 aaKnown RBP12.52□□□□□ -0.41
NCKIPSD-208ENST00000454134 CATR1Q13166 79 aa12.52□□□□□ -0.41
NCKIPSD-208ENST00000454134 COMMD3Q9UBI1 195 aa12.52□□□□□ -0.41
NCKIPSD-208ENST00000454134 ANAPC10Q9UM13 185 aa12.52□□□□□ -0.41
NCKIPSD-208ENST00000454134 S4R3C0 116 aa12.52□□□□□ -0.41
NCKIPSD-208ENST00000454134 RBFOX2O43251 390 aaKnown RBP eCLIP12.51□□□□□ -0.41
NCKIPSD-208ENST00000454134 S1PR2O95136 353 aa12.51□□□□□ -0.41
NCKIPSD-208ENST00000454134 NDUFB8O95169 186 aa12.51□□□□□ -0.41
NCKIPSD-208ENST00000454134 HLA-AP01891 365 aaKnown RBP12.51□□□□□ -0.41
NCKIPSD-208ENST00000454134 IGHV4-30-4P0DP06 118 aa12.51□□□□□ -0.41
NCKIPSD-208ENST00000454134 RPA2P15927 270 aa12.51□□□□□ -0.41
NCKIPSD-208ENST00000454134 PRSS3P35030 304 aa12.51□□□□□ -0.41
NCKIPSD-208ENST00000454134 AADACL3Q5VUY0 350 aa12.51□□□□□ -0.41
NCKIPSD-208ENST00000454134 OR5H2Q8NGV7 314 aa12.51□□□□□ -0.41
NCKIPSD-208ENST00000454134 FANCD2OSQ96PS1 177 aa12.51□□□□□ -0.41
NCKIPSD-208ENST00000454134 ZNF2Q9BSG1 426 aaPredicted RBP12.51□□□□□ -0.41
NCKIPSD-208ENST00000454134 BET1LQ9NYM9 111 aa12.51□□□□□ -0.41
NCKIPSD-208ENST00000454134 IZUMO1RA6ND01 250 aa12.5□□□□□ -0.41
NCKIPSD-208ENST00000454134 HPRT1P00492 218 aa12.5□□□□□ -0.41
NCKIPSD-208ENST00000454134 PSMB6P28072 239 aa12.5□□□□□ -0.41
NCKIPSD-208ENST00000454134 TAS2R31P59538 309 aa12.5□□□□□ -0.41
NCKIPSD-208ENST00000454134 DHRS11Q6UWP2 260 aa12.5□□□□□ -0.41
NCKIPSD-208ENST00000454134 OR4A5Q8NH83 315 aa12.5□□□□□ -0.41
NCKIPSD-208ENST00000454134 MOB3AQ96BX8 217 aa12.5□□□□□ -0.41
NCKIPSD-208ENST00000454134 KCTD12Q96CX2 325 aaKnown RBP12.5□□□□□ -0.41
NCKIPSD-208ENST00000454134 RCHY1Q96PM5 261 aa12.5□□□□□ -0.41
NCKIPSD-208ENST00000454134 AIFM2Q9BRQ8 373 aa12.5□□□□□ -0.41
NCKIPSD-208ENST00000454134 DMRT1Q9Y5R6 373 aa12.5□□□□□ -0.41
NCKIPSD-208ENST00000454134 H0Y980 276 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 UPK2O00526 184 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 OR2C1O95371 312 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 RLN1P04808 185 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 CRYGCP07315 174 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 NQO2P16083 231 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 CTRB1P17538 263 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 NAT1P18440 290 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 EDN2P20800 178 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 HLA-DMAP28067 261 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 TAS2R46P59540 309 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 OR2B8PP59922 312 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 POU2AF1Q16633 256 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 CTRB2Q6GPI1 263 aa12.49□□□□□ -0.41
NCKIPSD-208ENST00000454134 ADAMTSL5Q6ZMM2 481 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 197.4 ms