RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 hCG_1809904A0A1W2PP81 198 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 A0A1W2PPV4 95 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 A0A1W2PR64 198 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 A0A1W2PRV1 198 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 ZNF727A8MUV8 499 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 SHISA9B4DS77 424 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 E7EQL1 145 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 RRHO14718 337 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 HMGB3O15347 200 aaKnown RBP8.56□□□□□ -1.04
CPNE1-218ENST00000439806 NDUFA2O43678 99 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 GFRA3O60609 400 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 EIF3GO75821 320 aaKnown RBP eCLIP8.56□□□□□ -1.04
CPNE1-218ENST00000439806 S100A6P06703 90 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 MDKP21741 143 aaPredicted RBP8.56□□□□□ -1.04
CPNE1-218ENST00000439806 NPY1RP25929 384 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 MAS1LP35410 378 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 CTAG1AP78358 180 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 POU2AF1Q16633 256 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 ZCCHC24Q8N2G6 241 aaKnown RBP8.56□□□□□ -1.04
CPNE1-218ENST00000439806 SLC24A4Q8NFF2 622 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 ZCCHC14Q8WYQ9 949 aaKnown RBP8.56□□□□□ -1.04
CPNE1-218ENST00000439806 CCL17Q92583 94 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 RAB24Q969Q5 203 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 HINT2Q9BX68 163 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 MS4A5Q9H3V2 200 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 OR51B2Q9Y5P1 312 aa8.56□□□□□ -1.04
CPNE1-218ENST00000439806 FAM90A27PA6NNH2 459 aa8.55□□□□□ -1.04
CPNE1-218ENST00000439806 UPK2O00526 184 aa8.55□□□□□ -1.04
CPNE1-218ENST00000439806 ATXN7O15265 892 aaPredicted RBP8.55□□□□□ -1.04
CPNE1-218ENST00000439806 NDUFS6O75380 124 aaKnown RBP8.55□□□□□ -1.04
CPNE1-218ENST00000439806 CT45A6P0DMU7 189 aa8.55□□□□□ -1.04
CPNE1-218ENST00000439806 CT45A5P0DMU8 189 aa8.55□□□□□ -1.04
CPNE1-218ENST00000439806 CT45A7P0DMV0 189 aa8.55□□□□□ -1.04
CPNE1-218ENST00000439806 CCL3L1P16619 93 aa8.55□□□□□ -1.04
CPNE1-218ENST00000439806 APOBEC3AP31941 199 aaPredicted RBP8.55□□□□□ -1.04
CPNE1-218ENST00000439806 OPRK1P41145 380 aa8.55□□□□□ -1.04
CPNE1-218ENST00000439806 RPL35P42766 123 aaKnown RBP8.55□□□□□ -1.04
CPNE1-218ENST00000439806 MEF2BQ02080 365 aaPredicted RBP8.55□□□□□ -1.04
CPNE1-218ENST00000439806 HEPN1Q6WQI6 88 aa8.55□□□□□ -1.04
CPNE1-218ENST00000439806 ZNF833PQ6ZTB9 187 aa8.55□□□□□ -1.04
CPNE1-218ENST00000439806 ABHD12Q8N2K0 398 aa8.55□□□□□ -1.04
CPNE1-218ENST00000439806 OR4F5Q8NH21 305 aa8.55□□□□□ -1.04
CPNE1-218ENST00000439806 NEUROG1Q92886 237 aa8.55□□□□□ -1.04
CPNE1-218ENST00000439806 MALSU1Q96EH3 234 aa8.55□□□□□ -1.04
CPNE1-218ENST00000439806 OR4F4Q96R69 305 aa8.55□□□□□ -1.04
CPNE1-218ENST00000439806 TMPRSS5Q9H3S3 457 aa8.55□□□□□ -1.04
CPNE1-218ENST00000439806 PLEKHA3Q9HB20 300 aa8.55□□□□□ -1.04
CPNE1-218ENST00000439806 TMEM14BQ9NUH8 114 aa8.55□□□□□ -1.04
CPNE1-218ENST00000439806 NAT8Q9UHE5 227 aa8.55□□□□□ -1.04
CPNE1-218ENST00000439806 CXorf65A6NEN9 183 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 SEC14L6B5MCN3 397 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 B9A039 149 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 TMEM250H0YL14 139 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 KBTBD11O94819 623 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 CA2P00918 260 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 AGAP20933 346 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 EFNB3Q15768 340 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 ZNF674Q2M3X9 581 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 TMEM200BQ69YZ2 307 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 LYPD2Q6UXB3 125 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 TREML4Q6UXN2 200 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 DMRTC2Q8IXT2 367 aaPredicted RBP8.54□□□□□ -1.04
CPNE1-218ENST00000439806 NEIL1Q96FI4 390 aaPredicted RBP8.54□□□□□ -1.04
CPNE1-218ENST00000439806 SMIM7Q9BQ49 75 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 GGTLC1Q9BX51 225 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 MRPL20Q9BYC9 149 aaKnown RBP8.54□□□□□ -1.04
CPNE1-218ENST00000439806 SDF2L1Q9HCN8 221 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 NPVFQ9HCQ7 196 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 FKBP11Q9NYL4 201 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 ZNF257Q9Y2Q1 563 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 KLF2Q9Y5W3 355 aaPredicted RBP8.54□□□□□ -1.04
CPNE1-218ENST00000439806 PXMP4Q9Y6I8 212 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 TTC28Q96AY4 2481 aa8.54□□□□□ -1.04
CPNE1-218ENST00000439806 IGHV1-69-2A0A0G2JMI3 117 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.53□□□□□ -1.04
CPNE1-218ENST00000439806 PRSS46E5RG02 174 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 J3QR06 171 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 DVL1O14640 695 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 PAGE4O60829 102 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 IL3RAP26951 378 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 CA7P43166 264 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 RPS10P46783 165 aaKnown RBP8.53□□□□□ -1.04
CPNE1-218ENST00000439806 CD81P60033 236 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 PRCDQ00LT1 54 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 KLRB1Q12918 225 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 RAB31Q13636 194 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 TMEM241Q24JQ0 296 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 MIC13Q5XKP0 118 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 FAM71F2Q6NXP2 309 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 OR10X1Q8NGY0 326 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 OSR1Q8TAX0 266 aaPredicted RBP8.53□□□□□ -1.04
CPNE1-218ENST00000439806 RAB1CQ92928 201 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 RPUSD4Q96CM3 377 aaKnown RBP8.53□□□□□ -1.04
CPNE1-218ENST00000439806 HARBI1Q96MB7 349 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 YPEL4Q96NS1 127 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 MGST2Q99735 147 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 CTDSP1Q9GZU7 261 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 BET1LQ9NYM9 111 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 ZNRD1Q9P1U0 126 aa8.53□□□□□ -1.04
CPNE1-218ENST00000439806 MYO15AQ9UKN7 3530 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms