RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 TRIM64CA6NLI5 447 aa9.78□□□□□ -0.84
SGCE-203ENST00000425444 JTBO76095 146 aa9.78□□□□□ -0.84
SGCE-203ENST00000425444 OR2A4O95047 310 aa9.78□□□□□ -0.84
SGCE-203ENST00000425444 CATR1Q13166 79 aa9.78□□□□□ -0.84
SGCE-203ENST00000425444 MSMO1Q15800 293 aa9.78□□□□□ -0.84
SGCE-203ENST00000425444 MRGPRG-AS1Q2M3A8 158 aa9.78□□□□□ -0.84
SGCE-203ENST00000425444 C10orf55Q5SWW7 151 aa9.78□□□□□ -0.84
SGCE-203ENST00000425444 SSX9Q7RTT3 188 aa9.78□□□□□ -0.84
SGCE-203ENST00000425444 ZNF429Q86V71 674 aa9.78□□□□□ -0.84
SGCE-203ENST00000425444 SBSPONQ8IVN8 264 aa9.78□□□□□ -0.84
SGCE-203ENST00000425444 VKORC1L1Q8N0U8 176 aa9.78□□□□□ -0.84
SGCE-203ENST00000425444 ZBTB34Q8NCN2 500 aa9.78□□□□□ -0.84
SGCE-203ENST00000425444 OR2A7Q96R45 310 aa9.78□□□□□ -0.84
SGCE-203ENST00000425444 CITED4Q96RK1 184 aa9.78□□□□□ -0.84
SGCE-203ENST00000425444 KBTBD11O94819 623 aa9.77□□□□□ -0.85
SGCE-203ENST00000425444 HRASP01112 189 aa9.77□□□□□ -0.85
SGCE-203ENST00000425444 EIF4EP06730 217 aaKnown RBP9.77□□□□□ -0.85
SGCE-203ENST00000425444 ZP3P21754 424 aa9.77□□□□□ -0.85
SGCE-203ENST00000425444 PRSS3P35030 304 aa9.77□□□□□ -0.85
SGCE-203ENST00000425444 EIF4EBP1Q13541 118 aaPredicted RBP9.77□□□□□ -0.85
SGCE-203ENST00000425444 SPAG16Q8N0X2 631 aa9.77□□□□□ -0.85
SGCE-203ENST00000425444 ADAD2Q8NCV1 583 aaKnown RBP9.77□□□□□ -0.85
SGCE-203ENST00000425444 OR5H2Q8NGV7 314 aa9.77□□□□□ -0.85
SGCE-203ENST00000425444 GIMAP1Q8WWP7 306 aa9.77□□□□□ -0.85
SGCE-203ENST00000425444 OR4C12Q96R67 309 aa9.77□□□□□ -0.85
SGCE-203ENST00000425444 RSRP1Q9BUV0 290 aa9.77□□□□□ -0.85
SGCE-203ENST00000425444 SMIM31A0A1B0GVY4 71 aa9.76□□□□□ -0.85
SGCE-203ENST00000425444 DPPA5A6NC42 116 aa9.76□□□□□ -0.85
SGCE-203ENST00000425444 SULT1C2O00338 296 aa9.76□□□□□ -0.85
SGCE-203ENST00000425444 BRI3O95415 125 aa9.76□□□□□ -0.85
SGCE-203ENST00000425444 PMP2P02689 132 aa9.76□□□□□ -0.85
SGCE-203ENST00000425444 RPL27AP46776 148 aaKnown RBP9.76□□□□□ -0.85
SGCE-203ENST00000425444 TAS2R46P59540 309 aa9.76□□□□□ -0.85
SGCE-203ENST00000425444 AADACL3Q5VUY0 350 aa9.76□□□□□ -0.85
SGCE-203ENST00000425444 ACSM6Q6P461 480 aa9.76□□□□□ -0.85
SGCE-203ENST00000425444 ZNF818PQ6ZRF7 136 aa9.76□□□□□ -0.85
SGCE-203ENST00000425444 SLC25A42Q86VD7 318 aa9.76□□□□□ -0.85
SGCE-203ENST00000425444 OR6Q1Q8NGQ2 317 aa9.76□□□□□ -0.85
SGCE-203ENST00000425444 OR51H1Q8NH63 302 aa9.76□□□□□ -0.85
SGCE-203ENST00000425444 TMEM167AQ8TBQ9 72 aa9.76□□□□□ -0.85
SGCE-203ENST00000425444 BORCS5Q969J3 196 aa9.76□□□□□ -0.85
SGCE-203ENST00000425444 USMG5Q96IX5 58 aa9.76□□□□□ -0.85
SGCE-203ENST00000425444 FYTTD1Q96QD9 318 aaKnown RBP9.76□□□□□ -0.85
SGCE-203ENST00000425444 AIFM2Q9BRQ8 373 aa9.76□□□□□ -0.85
SGCE-203ENST00000425444 ZNF2Q9BSG1 426 aaPredicted RBP9.76□□□□□ -0.85
SGCE-203ENST00000425444 ELOVL1Q9BW60 279 aa9.76□□□□□ -0.85
SGCE-203ENST00000425444 ZMAT4Q9H898 229 aa9.76□□□□□ -0.85
SGCE-203ENST00000425444 HMX3A6NHT5 357 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 FAM25AB3EWG3 89 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 FAM25CB3EWG5 89 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 FAM25GB3EWG6 89 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 APOA1P02647 267 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 PRH1P02810 166 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 SMIM18P0DKX4 95 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 RFX2P48378 723 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 RORCP51449 518 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 BRWD1-AS2P59051 145 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 RHOGP84095 191 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 DYRK1AQ13627 763 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 RPEL1Q2QD12 228 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 SNX29P2Q8IUI4 249 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 PUSL1Q8N0Z8 303 aaKnown RBP9.75□□□□□ -0.85
SGCE-203ENST00000425444 AP3S1Q92572 193 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 HRASLSQ9HDD0 168 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 PEF1Q9UBV8 284 aaKnown RBP9.75□□□□□ -0.85
SGCE-203ENST00000425444 ANAPC10Q9UM13 185 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 SMAD5-AS1Q9Y6J3 95 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 KIAA1109Q2LD37 5005 aa9.75□□□□□ -0.85
SGCE-203ENST00000425444 FAM223BA6NKX1 122 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 RBFOX2O43251 390 aaKnown RBP eCLIP9.74□□□□□ -0.85
SGCE-203ENST00000425444 HPGDSO60760 199 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 GABARAPO95166 117 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 RLN1P04808 185 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 SPNP16150 400 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 HLA-DMAP28067 261 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 HRH1P35367 487 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 MAS1LP35410 378 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 TAS2R31P59538 309 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 RPL8P62917 257 aaKnown RBP9.74□□□□□ -0.85
SGCE-203ENST00000425444 EXOSC2Q13868 293 aaKnown RBP9.74□□□□□ -0.85
SGCE-203ENST00000425444 GPR107Q5VW38 600 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 ZNF343Q6P1L6 599 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 MZT2AQ6P582 158 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 HAPLN4Q86UW8 402 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 ANKRD13BQ86YJ7 626 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 FAM223AQ8IWN6 122 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 OR6F1Q8NGZ6 308 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 MOB3AQ96BX8 217 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 ISOC1Q96CN7 298 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 CMTM3Q96MX0 182 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 MRPS26Q9BYN8 205 aaKnown RBP9.74□□□□□ -0.85
SGCE-203ENST00000425444 NAA50Q9GZZ1 169 aaKnown RBP9.74□□□□□ -0.85
SGCE-203ENST00000425444 AKIP1Q9NQ31 210 aa9.74□□□□□ -0.85
SGCE-203ENST00000425444 TEX22C9J3V5 150 aa9.73□□□□□ -0.85
SGCE-203ENST00000425444 OR2J3O76001 311 aa9.73□□□□□ -0.85
SGCE-203ENST00000425444 HPRT1P00492 218 aa9.73□□□□□ -0.85
SGCE-203ENST00000425444 TRBV12-3P01733 135 aa9.73□□□□□ -0.85
SGCE-203ENST00000425444 NQO2P16083 231 aa9.73□□□□□ -0.85
SGCE-203ENST00000425444 HLA-GP17693 338 aa9.73□□□□□ -0.85
SGCE-203ENST00000425444 NAT1P18440 290 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms