RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 NUTF2P61970 127 aaKnown RBP4.45□□□□□ -1.7
SDCBP-203ENST00000424270 SNRPGP62308 76 aaKnown RBP4.45□□□□□ -1.7
SDCBP-203ENST00000424270 GPR176Q14439 515 aa4.45□□□□□ -1.7
SDCBP-203ENST00000424270 USF2Q15853 346 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-203ENST00000424270 ACTL10Q5JWF8 245 aa4.45□□□□□ -1.7
SDCBP-203ENST00000424270 FAM222AQ5U5X8 452 aa4.45□□□□□ -1.7
SDCBP-203ENST00000424270 CYP2R1Q6VVX0 501 aa4.45□□□□□ -1.7
SDCBP-203ENST00000424270 SSX7Q7RTT5 188 aa4.45□□□□□ -1.7
SDCBP-203ENST00000424270 TCF24Q7RTU0 167 aa4.45□□□□□ -1.7
SDCBP-203ENST00000424270 LRRTM1Q86UE6 522 aa4.45□□□□□ -1.7
SDCBP-203ENST00000424270 GID4Q8IVV7 300 aa4.45□□□□□ -1.7
SDCBP-203ENST00000424270 MMD2Q8IY49 270 aa4.45□□□□□ -1.7
SDCBP-203ENST00000424270 TEX45Q8NA69 505 aa4.45□□□□□ -1.7
SDCBP-203ENST00000424270 MRPL30Q8TCC3 161 aaKnown RBP4.45□□□□□ -1.7
SDCBP-203ENST00000424270 C1QTNF4Q9BXJ3 329 aa4.45□□□□□ -1.7
SDCBP-203ENST00000424270 SELENOIQ9C0D9 397 aa4.45□□□□□ -1.7
SDCBP-203ENST00000424270 WDR12Q9GZL7 423 aaKnown RBP4.45□□□□□ -1.7
SDCBP-203ENST00000424270 C11orf54Q9H0W9 315 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-203ENST00000424270 ZNF430Q9H8G1 570 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-203ENST00000424270 TAS2R4Q9NYW5 299 aa4.45□□□□□ -1.7
SDCBP-203ENST00000424270 THYN1Q9P016 225 aa4.45□□□□□ -1.7
SDCBP-203ENST00000424270 GHRLQ9UBU3 117 aa4.45□□□□□ -1.7
SDCBP-203ENST00000424270 RBM7Q9Y580 266 aaKnown RBP4.45□□□□□ -1.7
SDCBP-203ENST00000424270 ETV7Q9Y603 341 aa4.45□□□□□ -1.7
SDCBP-203ENST00000424270 VPS13BQ7Z7G8 4022 aa4.45□□□□□ -1.7
SDCBP-203ENST00000424270 TRBV5-7A0A0A0MS05 114 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 NPIPB5A8MRT5 1133 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-203ENST00000424270 J3QLW9 94 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 NDUFA4O00483 81 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 CYB5BO43169 146 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 PAX4O43316 350 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 CRTAPO75718 401 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-203ENST00000424270 CRYZL1O95825 349 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 RRASP10301 218 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 ZNF19P17023 458 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 RPL27AP46776 148 aaKnown RBP4.44□□□□□ -1.7
SDCBP-203ENST00000424270 NANOS3P60323 173 aaKnown RBP4.44□□□□□ -1.7
SDCBP-203ENST00000424270 TPBGQ13641 420 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 UBE2UQ5VVX9 321 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 TRPT1Q86TN4 253 aaKnown RBP4.44□□□□□ -1.7
SDCBP-203ENST00000424270 GGHQ92820 318 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 IL4I1Q96RQ9 567 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 CENPOQ9BU64 300 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 ZNF436Q9C0F3 470 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-203ENST00000424270 BANF2Q9H503 90 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 ISG20L2Q9H9L3 353 aaKnown RBP4.44□□□□□ -1.7
SDCBP-203ENST00000424270 SLC2A9Q9NRM0 540 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 FAM212BQ9NTI7 297 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-203ENST00000424270 ZNF446Q9NWS9 450 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 ZNF586Q9NXT0 402 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 OR1A1Q9P1Q5 309 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 XCL2Q9UBD3 114 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 SMPXQ9UHP9 88 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 LINC00588Q9Y4M8 146 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 NACAE9PAV3 2078 aa4.44□□□□□ -1.7
SDCBP-203ENST00000424270 IGHV7-4-1A0A0J9YVY3 117 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 DAPL1A0PJW8 107 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 SRRM4A7MD48 611 aaKnown RBP4.43□□□□□ -1.7
SDCBP-203ENST00000424270 F5H768 121 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 RAB27BO00194 218 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 CHEK1O14757 476 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 ST8SIA3O43173 380 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 EDF1O60869 148 aaKnown RBP4.43□□□□□ -1.7
SDCBP-203ENST00000424270 CD2P06729 351 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 GIG44P09565 113 aaPredicted RBP4.43□□□□□ -1.7
SDCBP-203ENST00000424270 ANXA8P13928 327 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 AREGP15514 252 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 CRHBPP24387 322 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 OR2B8PP59922 312 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 KIR3DS1Q14943 382 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 CDK10Q15131 360 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 HMGN3Q15651 99 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 Q56UQ5 140 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 TTC23Q5W5X9 447 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 PARP16Q8N5Y8 322 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 OR6M1Q8NGM8 313 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 ZNF502Q8TBZ5 544 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 TLCD1Q96CP7 247 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 NEDD4LQ96PU5 975 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 OR2D2Q9H210 308 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 MS4A6AQ9H2W1 248 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 WARS2Q9UGM6 360 aaKnown RBP4.43□□□□□ -1.7
SDCBP-203ENST00000424270 HSF4Q9ULV5 492 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 PUS1Q9Y606 427 aaKnown RBP eCLIP4.43□□□□□ -1.7
SDCBP-203ENST00000424270 RFNGQ9Y644 331 aa4.43□□□□□ -1.7
SDCBP-203ENST00000424270 TRAV14DV4A0A0A6YYC5 116 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 IGHV3-66A0A0C4DH42 116 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 C15orf62A8K5M9 175 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 K7EMT4 169 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 NUPL2O15504 423 aaKnown RBP4.42□□□□□ -1.7
SDCBP-203ENST00000424270 PDCD6O75340 191 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 SC5DO75845 299 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 CST1P01037 141 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 CD5P06127 495 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 ZNF688P0C7X2 276 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 SAA1P0DJI8 122 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-203ENST00000424270 BDKRB2P30411 391 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 GNRHRP30968 328 aa4.42□□□□□ -1.7
SDCBP-203ENST00000424270 MAS1LP35410 378 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms