RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 WDR86Q86TI4 376 aa13.94□□□□□ -0.18
GCFC2-202ENST00000409857 NECAP1Q8NC96 275 aa13.94□□□□□ -0.18
GCFC2-202ENST00000409857 PERPQ96FX8 193 aa13.94□□□□□ -0.18
GCFC2-202ENST00000409857 OR4C12Q96R67 309 aa13.94□□□□□ -0.18
GCFC2-202ENST00000409857 FOXC2Q99958 501 aa13.94□□□□□ -0.18
GCFC2-202ENST00000409857 GCM1Q9NP62 436 aa13.94□□□□□ -0.18
GCFC2-202ENST00000409857 NAV2Q8IVL1 2488 aa13.94□□□□□ -0.18
GCFC2-202ENST00000409857 A0A1B0GV90 55 aa13.94□□□□□ -0.18
GCFC2-202ENST00000409857 LRP5LA4QPB2 252 aa13.94□□□□□ -0.18
GCFC2-202ENST00000409857 PNRC1Q12796 327 aaPredicted RBP13.94□□□□□ -0.18
GCFC2-202ENST00000409857 LRRC75BQ2VPJ9 315 aa13.94□□□□□ -0.18
GCFC2-202ENST00000409857 PRSS57Q6UWY2 283 aa13.94□□□□□ -0.18
GCFC2-202ENST00000409857 PACRGQ96M98 296 aaPredicted RBP13.94□□□□□ -0.18
GCFC2-202ENST00000409857 HIST1H2BLQ99880 126 aa13.94□□□□□ -0.18
GCFC2-202ENST00000409857 OR51I2Q9H344 312 aa13.94□□□□□ -0.18
GCFC2-202ENST00000409857 MAP1LC3B2A6NCE7 125 aa13.93□□□□□ -0.18
GCFC2-202ENST00000409857 IGKV1D-33P01593 117 aa13.93□□□□□ -0.18
GCFC2-202ENST00000409857 IGKV1-33P01594 117 aa13.93□□□□□ -0.18
GCFC2-202ENST00000409857 ZNF585BQ52M93 769 aa13.93□□□□□ -0.18
GCFC2-202ENST00000409857 FAM58AQ8N1B3 248 aa13.93□□□□□ -0.18
GCFC2-202ENST00000409857 MAP1LC3BQ9GZQ8 125 aa13.93□□□□□ -0.18
GCFC2-202ENST00000409857 TMEM242Q9NWH2 141 aa13.93□□□□□ -0.18
GCFC2-202ENST00000409857 KCNS2Q9ULS6 477 aa13.93□□□□□ -0.18
GCFC2-202ENST00000409857 UBE2L5PA0A1B0GUS4 154 aa13.93□□□□□ -0.18
GCFC2-202ENST00000409857 DSCR9P59020 149 aa13.93□□□□□ -0.18
GCFC2-202ENST00000409857 ADIRFQ15847 76 aa13.93□□□□□ -0.18
GCFC2-202ENST00000409857 CLEC12BQ2HXU8 276 aa13.93□□□□□ -0.18
GCFC2-202ENST00000409857 ZNF573Q86YE8 665 aa13.93□□□□□ -0.18
GCFC2-202ENST00000409857 VAX2Q9UIW0 290 aa13.93□□□□□ -0.18
GCFC2-202ENST00000409857 RBM7Q9Y580 266 aaKnown RBP13.93□□□□□ -0.18
GCFC2-202ENST00000409857 IGHV3-64DA0A0J9YX35 117 aa13.92□□□□□ -0.18
GCFC2-202ENST00000409857 SLC25A6P12236 298 aa13.92□□□□□ -0.18
GCFC2-202ENST00000409857 OR8G2PQ6IF36 304 aa13.92□□□□□ -0.18
GCFC2-202ENST00000409857 C11orf53Q8IXP5 236 aa13.92□□□□□ -0.18
GCFC2-202ENST00000409857 OR4X1Q8NH49 305 aa13.92□□□□□ -0.18
GCFC2-202ENST00000409857 WDR61Q9GZS3 305 aaKnown RBP13.92□□□□□ -0.18
GCFC2-202ENST00000409857 RIMS4Q9H426 269 aaPredicted RBP13.92□□□□□ -0.18
GCFC2-202ENST00000409857 ZNF737O75373 536 aa13.92□□□□□ -0.18
GCFC2-202ENST00000409857 CFHR2P36980 270 aa13.92□□□□□ -0.18
GCFC2-202ENST00000409857 CD81P60033 236 aa13.92□□□□□ -0.18
GCFC2-202ENST00000409857 PRAMEF6Q5VXH4 476 aa13.92□□□□□ -0.18
GCFC2-202ENST00000409857 CHODLQ9H9P2 273 aa13.92□□□□□ -0.18
GCFC2-202ENST00000409857 CSMD2Q7Z408 3487 aa13.92□□□□□ -0.18
GCFC2-202ENST00000409857 TRBV24-1A0A075B6N3 115 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 SIRPB1O00241 398 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 GRPP07492 148 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 COL8A2P25067 703 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 TMEM41BQ5BJD5 291 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 MOGAT3Q86VF5 341 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 RPP25LQ8N5L8 163 aaKnown RBP13.91□□□□□ -0.18
GCFC2-202ENST00000409857 SMIM7Q9BQ49 75 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 PSMG3Q9BT73 122 aaPredicted RBP13.91□□□□□ -0.18
GCFC2-202ENST00000409857 PKIBQ9C010 78 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 TRBV6-6A0A0A6YYG2 114 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 LRRC30A6NM36 301 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 NDUFS8O00217 210 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 DEGS1O15121 323 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 LY6HO94772 140 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 IL2RGP31785 369 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 PDLIM4P50479 330 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 C16orf82Q7Z2V1 217 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 SCCPDHQ8NBX0 429 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 GATAD1Q8WUU5 269 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 LHX4Q969G2 390 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 LSM10Q969L4 123 aaKnown RBP13.91□□□□□ -0.18
GCFC2-202ENST00000409857 RPUSD4Q96CM3 377 aaKnown RBP13.91□□□□□ -0.18
GCFC2-202ENST00000409857 TMEM106BQ9NUM4 274 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 GAB2Q9UQC2 676 aa13.91□□□□□ -0.18
GCFC2-202ENST00000409857 OPN1MWP04001 364 aa13.9□□□□□ -0.18
GCFC2-202ENST00000409857 OPN1MW2P0DN77 364 aa13.9□□□□□ -0.18
GCFC2-202ENST00000409857 OPN1MW3P0DN78 364 aa13.9□□□□□ -0.18
GCFC2-202ENST00000409857 RPS16P62249 146 aaKnown RBP13.9□□□□□ -0.18
GCFC2-202ENST00000409857 HBG1P69891 147 aa13.9□□□□□ -0.18
GCFC2-202ENST00000409857 HBG2P69892 147 aa13.9□□□□□ -0.18
GCFC2-202ENST00000409857 RELQ04864 619 aaPredicted RBP13.9□□□□□ -0.18
GCFC2-202ENST00000409857 SSX9Q7RTT3 188 aa13.9□□□□□ -0.18
GCFC2-202ENST00000409857 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.9□□□□□ -0.18
GCFC2-202ENST00000409857 J3QT63 122 aa13.9□□□□□ -0.18
GCFC2-202ENST00000409857 FSTL3O95633 263 aa13.9□□□□□ -0.18
GCFC2-202ENST00000409857 GZMHP20718 246 aa13.9□□□□□ -0.18
GCFC2-202ENST00000409857 SERF2P84101 59 aa13.9□□□□□ -0.18
GCFC2-202ENST00000409857 COL10A1Q03692 680 aa13.9□□□□□ -0.18
GCFC2-202ENST00000409857 FAM53AQ6NSI3 398 aaPredicted RBP13.9□□□□□ -0.18
GCFC2-202ENST00000409857 WDR82Q6UXN9 313 aa13.9□□□□□ -0.18
GCFC2-202ENST00000409857 OR10A7Q8NGE5 316 aa13.9□□□□□ -0.18
GCFC2-202ENST00000409857 TAF15Q92804 592 aaKnown RBP eCLIP13.9□□□□□ -0.18
GCFC2-202ENST00000409857 P2RX4Q99571 388 aa13.9□□□□□ -0.18
GCFC2-202ENST00000409857 SLC39A9Q9NUM3 307 aa13.9□□□□□ -0.18
GCFC2-202ENST00000409857 IRF2P14316 349 aa13.89□□□□□ -0.19
GCFC2-202ENST00000409857 SLC38A11Q08AI6 406 aa13.89□□□□□ -0.19
GCFC2-202ENST00000409857 NCR3LG1Q68D85 454 aa13.89□□□□□ -0.19
GCFC2-202ENST00000409857 Q6P435 159 aa13.89□□□□□ -0.19
GCFC2-202ENST00000409857 CLEC2AQ6UVW9 174 aa13.89□□□□□ -0.19
GCFC2-202ENST00000409857 CCL17Q92583 94 aa13.89□□□□□ -0.19
GCFC2-202ENST00000409857 ELOVL1Q9BW60 279 aa13.89□□□□□ -0.19
GCFC2-202ENST00000409857 SLC25A22Q9H936 323 aa13.89□□□□□ -0.19
GCFC2-202ENST00000409857 RNF7Q9UBF6 113 aa13.89□□□□□ -0.19
GCFC2-202ENST00000409857 POLDIP2Q9Y2S7 368 aa13.89□□□□□ -0.19
GCFC2-202ENST00000409857 SMCO3A2RU48 225 aa13.89□□□□□ -0.19
GCFC2-202ENST00000409857 TMEM178BH3BS89 294 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms