RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ZNF676Q8N7Q3 588 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 COQ8AQ8NI60 647 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 SYNPRQ8TBG9 265 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 LGALS14Q8TCE9 139 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 C15orf40Q8WUR7 153 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 SMIM4Q8WVI0 70 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 TMEM106AQ96A25 262 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 PTX4Q96A99 478 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 DDIT4LQ96D03 193 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 S100A16Q96FQ6 103 aaKnown RBP3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 ARL5BQ96KC2 179 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 AMELYQ99218 206 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 TSNAXQ99598 290 aaKnown RBP3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 C7orf50Q9BRJ6 194 aaKnown RBP3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 BEX2Q9BXY8 128 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 WDR54Q9H977 334 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 PLEKHA1Q9HB21 404 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 COPZ2Q9P299 210 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 NXT1Q9UKK6 140 aaKnown RBP3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 SLC22A13Q9Y226 551 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 RBMX2Q9Y388 322 aaKnown RBP3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 NUBP2Q9Y5Y2 271 aa3.12□□□□□ -1.91
HMGB3P18-201ENST00000406327 REV3LO60673 3130 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 ADAMTS9Q9P2N4 1935 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 LOC102725191A0A1B0GVB3 256 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 SEC14L6B5MCN3 397 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 C11orf94C9JXX5 98 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 GABARAPH6UMI1 98 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 TP53I11O14683 189 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 GMDSO60547 372 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 KLF7O75840 302 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 GLSO94925 669 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 LDOC1O95751 146 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 MT-ND4P03905 459 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 ISG15P05161 165 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 ZNF823P16415 610 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 IGFBP3P17936 291 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 CDK2P24941 298 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 FKBP2P26885 142 aaKnown RBP3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 CLDN12P56749 244 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 TAS2R46P59540 309 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 AP3S2P59780 193 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 MRPS10P82664 201 aaKnown RBP3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 MRPS15P82914 257 aaKnown RBP3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 FOXF1Q12946 379 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 PLPPR5Q32ZL2 321 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 Q5BKY6 102 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 TMEM69Q5SWH9 247 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 C6orf183Q5T699 404 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 BCL2L15Q5TBC7 163 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 DNM1P34Q6PK57 102 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 CEMP1Q6PRD7 247 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 DEGS2Q6QHC5 323 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 PLCZ1Q86YW0 608 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 WDFY1Q8IWB7 410 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 SLC7A5P1Q8MH63 180 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 SLC26A10Q8NG04 563 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 OR2M3Q8NG83 312 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 OR51A4Q8NGJ6 313 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 OR10AC1Q8NH08 325 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 ZFAND1Q8TCF1 268 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 RBP7Q96R05 134 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 EMC6Q9BV81 110 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 MAP1LC3CQ9BXW4 147 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 ULBP3Q9BZM4 244 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 MED28Q9H204 178 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 HRASLSQ9HDD0 168 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 PAQR5Q9NXK6 330 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 WIF1Q9Y5W5 379 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 R4GMQ9 66 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 V9GYY9 64 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 C5orf42Q9H799 3197 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 LRP4O75096 1905 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 F5P12259 2224 aa3.11□□□□□ -1.91
HMGB3P18-201ENST00000406327 DOCK9Q9BZ29 2069 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 HEATR5BQ9P2D3 2071 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 ATRXP46100 2492 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 IGHV1-45A0A0A0MS14 117 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 IGKV1D-43A0A0B4J1Z2 117 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 TMEM269A0A1B0GVZ9 245 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 ANKRD20A5PA0PJZ0 165 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 RAB19A4D1S5 217 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 D6RAR5 112 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 RBBP9O75884 186 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 YIF1AO95070 293 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 OXTP01178 125 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 CD2P06729 351 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 CCL4P13236 92 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 S100A1P23297 94 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 HTR2CP28335 458 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 RCVRNP35243 200 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 MYCNOSP40205 109 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 EIF1P41567 113 aaKnown RBP3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 UCNP55089 124 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 TAS2R20P59543 309 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 PAFAH1B2P68402 229 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 SLC35A1P78382 337 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 H3F3AP84243 136 aa3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 SSBP1Q04837 148 aaKnown RBP3.1□□□□□ -1.91
HMGB3P18-201ENST00000406327 FMODQ06828 376 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms