RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 EXTL2Q9UBQ6 330 aa13.52□□□□□ -0.25
UPK3A-202ENST00000396082 DPPA5A6NC42 116 aa13.51□□□□□ -0.25
UPK3A-202ENST00000396082 RBFOX2O43251 390 aaKnown RBP eCLIP13.51□□□□□ -0.25
UPK3A-202ENST00000396082 ECI1P42126 302 aa13.51□□□□□ -0.25
UPK3A-202ENST00000396082 RPL27AP46776 148 aaKnown RBP13.51□□□□□ -0.25
UPK3A-202ENST00000396082 DEFA5Q01523 94 aa13.51□□□□□ -0.25
UPK3A-202ENST00000396082 CMTM1Q8IZ96 169 aa13.51□□□□□ -0.25
UPK3A-202ENST00000396082 PUSL1Q8N0Z8 303 aaKnown RBP13.51□□□□□ -0.25
UPK3A-202ENST00000396082 ADAD2Q8NCV1 583 aaKnown RBP13.51□□□□□ -0.25
UPK3A-202ENST00000396082 DLX4Q92988 240 aaPredicted RBP13.51□□□□□ -0.25
UPK3A-202ENST00000396082 FYTTD1Q96QD9 318 aaKnown RBP13.51□□□□□ -0.25
UPK3A-202ENST00000396082 RANGRFQ9HD47 186 aaPredicted RBP13.51□□□□□ -0.25
UPK3A-202ENST00000396082 HRASLSQ9HDD0 168 aa13.51□□□□□ -0.25
UPK3A-202ENST00000396082 ADAM30Q9UKF2 790 aa13.51□□□□□ -0.25
UPK3A-202ENST00000396082 ANKRD34BA5PLL1 514 aa13.5□□□□□ -0.25
UPK3A-202ENST00000396082 RGS5O15539 181 aa13.5□□□□□ -0.25
UPK3A-202ENST00000396082 NOL3O60936 208 aaKnown RBP13.5□□□□□ -0.25
UPK3A-202ENST00000396082 SAP30O75446 220 aa13.5□□□□□ -0.25
UPK3A-202ENST00000396082 HPRT1P00492 218 aa13.5□□□□□ -0.25
UPK3A-202ENST00000396082 RLN1P04808 185 aa13.5□□□□□ -0.25
UPK3A-202ENST00000396082 GNRHRP30968 328 aa13.5□□□□□ -0.25
UPK3A-202ENST00000396082 MAS1LP35410 378 aa13.5□□□□□ -0.25
UPK3A-202ENST00000396082 INSL3P51460 131 aa13.5□□□□□ -0.25
UPK3A-202ENST00000396082 LYSMD2Q8IV50 215 aa13.5□□□□□ -0.25
UPK3A-202ENST00000396082 CD300LFQ8TDQ1 290 aa13.5□□□□□ -0.25
UPK3A-202ENST00000396082 USMG5Q96IX5 58 aa13.5□□□□□ -0.25
UPK3A-202ENST00000396082 FXYD6Q9H0Q3 95 aa13.5□□□□□ -0.25
UPK3A-202ENST00000396082 BRI3O95415 125 aa13.49□□□□□ -0.25
UPK3A-202ENST00000396082 NQO2P16083 231 aa13.49□□□□□ -0.25
UPK3A-202ENST00000396082 ZP3P21754 424 aa13.49□□□□□ -0.25
UPK3A-202ENST00000396082 S100GP29377 79 aa13.49□□□□□ -0.25
UPK3A-202ENST00000396082 TAS2R31P59538 309 aa13.49□□□□□ -0.25
UPK3A-202ENST00000396082 RPL8P62917 257 aaKnown RBP13.49□□□□□ -0.25
UPK3A-202ENST00000396082 DCTN2Q13561 401 aaKnown RBP13.49□□□□□ -0.25
UPK3A-202ENST00000396082 SPCS2Q15005 226 aa13.49□□□□□ -0.25
UPK3A-202ENST00000396082 OR4A47Q6IF82 309 aa13.49□□□□□ -0.25
UPK3A-202ENST00000396082 ZNF429Q86V71 674 aa13.49□□□□□ -0.25
UPK3A-202ENST00000396082 SLC25A42Q86VD7 318 aa13.49□□□□□ -0.25
UPK3A-202ENST00000396082 DMBX1Q8NFW5 382 aa13.49□□□□□ -0.25
UPK3A-202ENST00000396082 OR4A5Q8NH83 315 aa13.49□□□□□ -0.25
UPK3A-202ENST00000396082 RAB2BQ8WUD1 216 aa13.49□□□□□ -0.25
UPK3A-202ENST00000396082 BET1LQ9NYM9 111 aa13.49□□□□□ -0.25
UPK3A-202ENST00000396082 SCOCQ9UIL1 159 aa13.49□□□□□ -0.25
UPK3A-202ENST00000396082 HMX3A6NHT5 357 aa13.48□□□□□ -0.25
UPK3A-202ENST00000396082 GPR31O00270 319 aa13.48□□□□□ -0.25
UPK3A-202ENST00000396082 LY86O95711 162 aa13.48□□□□□ -0.25
UPK3A-202ENST00000396082 PRH1P02810 166 aa13.48□□□□□ -0.25
UPK3A-202ENST00000396082 ERVK-16P61578 105 aa13.48□□□□□ -0.25
UPK3A-202ENST00000396082 RHOGP84095 191 aa13.48□□□□□ -0.25
UPK3A-202ENST00000396082 C15orf40Q8WUR7 153 aa13.48□□□□□ -0.25
UPK3A-202ENST00000396082 PRR25Q96S07 402 aa13.48□□□□□ -0.25
UPK3A-202ENST00000396082 PLEKHA2Q9HB19 425 aa13.48□□□□□ -0.25
UPK3A-202ENST00000396082 COMMD9Q9P000 198 aa13.48□□□□□ -0.25
UPK3A-202ENST00000396082 FAM223BA6NKX1 122 aa13.47□□□□□ -0.25
UPK3A-202ENST00000396082 PGLYRP1O75594 196 aaPredicted RBP13.47□□□□□ -0.25
UPK3A-202ENST00000396082 S1PR2O95136 353 aa13.47□□□□□ -0.25
UPK3A-202ENST00000396082 IFNA6P05013 189 aa13.47□□□□□ -0.25
UPK3A-202ENST00000396082 HLA-GP17693 338 aa13.47□□□□□ -0.25
UPK3A-202ENST00000396082 LPCAT3Q6P1A2 487 aa13.47□□□□□ -0.25
UPK3A-202ENST00000396082 FAM223AQ8IWN6 122 aa13.47□□□□□ -0.25
UPK3A-202ENST00000396082 TTC9CQ8N5M4 171 aa13.47□□□□□ -0.25
UPK3A-202ENST00000396082 OR4C12Q96R67 309 aa13.47□□□□□ -0.25
UPK3A-202ENST00000396082 PEF1Q9UBV8 284 aaKnown RBP13.47□□□□□ -0.25
UPK3A-202ENST00000396082 ZNF256Q9Y2P7 627 aaPredicted RBP13.47□□□□□ -0.25
UPK3A-202ENST00000396082 ZNF257Q9Y2Q1 563 aa13.47□□□□□ -0.25
UPK3A-202ENST00000396082 M0QYG6 137 aa13.46□□□□□ -0.25
UPK3A-202ENST00000396082 IL6RP08887 468 aaPredicted RBP13.46□□□□□ -0.25
UPK3A-202ENST00000396082 ZNF735P0CB33 412 aa13.46□□□□□ -0.25
UPK3A-202ENST00000396082 RPA2P15927 270 aa13.46□□□□□ -0.25
UPK3A-202ENST00000396082 F2RP25116 425 aa13.46□□□□□ -0.25
UPK3A-202ENST00000396082 RPL5P46777 297 aaKnown RBP13.46□□□□□ -0.25
UPK3A-202ENST00000396082 TMBIM6P55061 237 aa13.46□□□□□ -0.25
UPK3A-202ENST00000396082 ATP5G2Q06055 141 aa13.46□□□□□ -0.25
UPK3A-202ENST00000396082 PHLDA2Q53GA4 152 aa13.46□□□□□ -0.25
UPK3A-202ENST00000396082 RNASE10Q5GAN6 216 aaKnown RBP13.46□□□□□ -0.25
UPK3A-202ENST00000396082 ZNF343Q6P1L6 599 aa13.46□□□□□ -0.25
UPK3A-202ENST00000396082 OR52I2Q8NH67 350 aa13.46□□□□□ -0.25
UPK3A-202ENST00000396082 DGCR14Q96DF8 476 aaKnown RBP13.46□□□□□ -0.25
UPK3A-202ENST00000396082 BCL7BQ9BQE9 202 aa13.46□□□□□ -0.25
UPK3A-202ENST00000396082 ELOVL1Q9BW60 279 aa13.46□□□□□ -0.25
UPK3A-202ENST00000396082 COMMD5Q9GZQ3 224 aa13.46□□□□□ -0.25
UPK3A-202ENST00000396082 AKIP1Q9NQ31 210 aa13.46□□□□□ -0.25
UPK3A-202ENST00000396082 TMEM140Q9NV12 185 aa13.46□□□□□ -0.25
UPK3A-202ENST00000396082 TGP01266 2768 aa13.45□□□□□ -0.26
UPK3A-202ENST00000396082 TEX22C9J3V5 150 aa13.45□□□□□ -0.26
UPK3A-202ENST00000396082 OR2J3O76001 311 aa13.45□□□□□ -0.26
UPK3A-202ENST00000396082 DHFRP00374 187 aa13.45□□□□□ -0.26
UPK3A-202ENST00000396082 MYOD1P15172 320 aa13.45□□□□□ -0.26
UPK3A-202ENST00000396082 LPAR6P43657 344 aa13.45□□□□□ -0.26
UPK3A-202ENST00000396082 ZNF45Q02386 682 aa13.45□□□□□ -0.26
UPK3A-202ENST00000396082 EXOSC2Q13868 293 aaKnown RBP13.45□□□□□ -0.26
UPK3A-202ENST00000396082 POU2AF1Q16633 256 aa13.45□□□□□ -0.26
UPK3A-202ENST00000396082 VAX1Q5SQQ9 334 aa13.45□□□□□ -0.26
UPK3A-202ENST00000396082 ACSM6Q6P461 480 aa13.45□□□□□ -0.26
UPK3A-202ENST00000396082 LAX1Q8IWV1 398 aa13.45□□□□□ -0.26
UPK3A-202ENST00000396082 NECAP1Q8NC96 275 aa13.45□□□□□ -0.26
UPK3A-202ENST00000396082 OR6Q1Q8NGQ2 317 aa13.45□□□□□ -0.26
UPK3A-202ENST00000396082 FCAMRQ8WWV6 532 aa13.45□□□□□ -0.26
UPK3A-202ENST00000396082 RSRP1Q9BUV0 290 aa13.45□□□□□ -0.26
UPK3A-202ENST00000396082 SLC2A9Q9NRM0 540 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms