RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 SHOX2O60902 331 aaPredicted RBP-0.89□□□□□ -2.55
RNU6-1228P-201ENST00000391014 HLA-DQB2P05538 268 aa-0.89□□□□□ -2.55
RNU6-1228P-201ENST00000391014 IBA57Q5T440 356 aaKnown RBP-0.89□□□□□ -2.55
RNU6-1228P-201ENST00000391014 ASCL4Q6XD76 172 aa-0.89□□□□□ -2.55
RNU6-1228P-201ENST00000391014 ZNF826PQ6ZT77 177 aa-0.89□□□□□ -2.55
RNU6-1228P-201ENST00000391014 ZNF676Q8N7Q3 588 aa-0.89□□□□□ -2.55
RNU6-1228P-201ENST00000391014 WFDC11Q8NEX6 87 aa-0.89□□□□□ -2.55
RNU6-1228P-201ENST00000391014 PXT1Q8NFP0 134 aa-0.89□□□□□ -2.55
RNU6-1228P-201ENST00000391014 C11orf40Q8WZ69 217 aa-0.89□□□□□ -2.55
RNU6-1228P-201ENST00000391014 GNB1LQ9BYB4 327 aa-0.89□□□□□ -2.55
RNU6-1228P-201ENST00000391014 TLNRD1Q9H1K6 362 aa-0.89□□□□□ -2.55
RNU6-1228P-201ENST00000391014 CHRAC1Q9NRG0 131 aa-0.89□□□□□ -2.55
RNU6-1228P-201ENST00000391014 EMC3Q9P0I2 261 aa-0.89□□□□□ -2.55
RNU6-1228P-201ENST00000391014 KPTNQ9Y664 436 aa-0.89□□□□□ -2.55
RNU6-1228P-201ENST00000391014 NEURL4Q96JN8 1562 aa-0.89□□□□□ -2.55
RNU6-1228P-201ENST00000391014 PHLPP2Q6ZVD8 1323 aa-0.89□□□□□ -2.55
RNU6-1228P-201ENST00000391014 TTC21AQ8NDW8 1320 aa-0.89□□□□□ -2.55
RNU6-1228P-201ENST00000391014 ABCC12Q96J65 1359 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 IGLV3-32A0A0A0MS00 114 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 TRAV8-1A0A0A6YYK1 113 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 C9JCJ5 164 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 ACOX3O15254 700 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 DNAL4O96015 105 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 HBZP02008 142 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 SULT1A3P0DMM9 295 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 SULT1A4P0DMN0 295 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 SRMP19623 302 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 CD151P48509 253 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 CDK9P50750 372 aaKnown RBP-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 DAD1P61803 113 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 CNBPP62633 177 aaKnown RBP-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 HERVK_113P63121 156 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 RAB31Q13636 194 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 EXOC3L4Q17RC7 722 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 HSP90AA4PQ58FG1 418 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 CAVIN4Q5BKX8 364 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 ACTL10Q5JWF8 245 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 DEFB128Q7Z7B8 93 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 C10orf67Q8IYJ2 551 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 LRRC45Q96CN5 670 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 SLC50A1Q9BRV3 221 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 UGT2B28Q9BY64 529 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 SYT4Q9H2B2 425 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 GAL3ST2Q9H3Q3 398 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 ZNHIT6Q9NWK9 470 aaKnown RBP-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 NPATQ14207 1427 aa-0.9□□□□□ -2.55
RNU6-1228P-201ENST00000391014 SYNJ2BP-COX16A0A087WUM0 186 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 SERTM2A0A1B0GWG4 89 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 A0A1B0GX12 115 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 EFCAB9A8MZ26 197 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 AGTR1P30556 359 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 RHOGP84095 191 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 BSXQ3C1V8 233 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 FAM74A1Q5RGS3 127 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 FAHD1Q6P587 224 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 ZNF321PQ8N8H1 164 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 MRAP2Q96G30 205 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 PRRG3Q9BZD7 231 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 XPNPEP1Q9NQW7 623 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 MED29Q9NX70 200 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 MAT2BQ9NZL9 334 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 HPCAL4Q9UM19 191 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 POLQO75417 2590 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 CACNA1HO95180 2353 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 CITO14578 2027 aa-0.91□□□□□ -2.56
RNU6-1228P-201ENST00000391014 CHD5Q8TDI0 1954 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 DOCK3Q8IZD9 2030 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 ZNF736B4DX44 427 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 SUPT3HB4E1H0 165 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 MRASO14807 208 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 CCL25O15444 150 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 TFPTP0C1Z6 253 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 TMEM33P57088 247 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 DAOAP59103 153 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 VSNL1P62760 191 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 C1DQ13901 141 aaKnown RBP-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 TEX261Q6UWH6 196 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 SSX6Q7RTT6 188 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 ZNF550Q7Z398 422 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 TBC1D19Q8N5T2 526 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 SFT2D1Q8WV19 159 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 MITD1Q8WV92 249 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 TOP1MTQ969P6 601 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 RSL24D1Q9UHA3 163 aaKnown RBP-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 TNFSF18Q9UNG2 199 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 TIMM22Q9Y584 194 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 U3KQ87 197 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 NCOR1O75376 2440 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 KNTC1P50748 2209 aa-0.92□□□□□ -2.56
RNU6-1228P-201ENST00000391014 THSD7AQ9UPZ6 1657 aa-0.93□□□□□ -2.56
RNU6-1228P-201ENST00000391014 CHD2O14647 1828 aaKnown RBP-0.93□□□□□ -2.56
RNU6-1228P-201ENST00000391014 HSPG2P98160 4391 aa-0.93□□□□□ -2.56
RNU6-1228P-201ENST00000391014 TMEM269A0A1B0GVZ9 245 aa-0.93□□□□□ -2.56
RNU6-1228P-201ENST00000391014 C5orf67F2Z3F1 127 aa-0.93□□□□□ -2.56
RNU6-1228P-201ENST00000391014 CDIPTO14735 213 aa-0.93□□□□□ -2.56
RNU6-1228P-201ENST00000391014 UGT2B11O75310 529 aa-0.93□□□□□ -2.56
RNU6-1228P-201ENST00000391014 C1QAP02745 245 aa-0.93□□□□□ -2.56
RNU6-1228P-201ENST00000391014 BAALC-AS2P0C853 105 aa-0.93□□□□□ -2.56
RNU6-1228P-201ENST00000391014 MIFP14174 115 aa-0.93□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms