RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 ATG12O94817 140 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 KBTBD11O94819 623 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 CDS2O95674 445 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 CA2P00918 260 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 IGKV1-39P01597 117 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 IGKV1D-39P04432 117 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 AKR1C4P17516 323 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 SLC6A1P30531 599 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 MAS1LP35410 378 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 UBE2MP61081 183 aaKnown RBP8.95□□□□□ -0.98
HSPG2-202ENST00000374676 ERVK-16P61578 105 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 SUPT4H1P63272 117 aaKnown RBP8.95□□□□□ -0.98
HSPG2-202ENST00000374676 SSBP2P81877 361 aaPredicted RBP8.95□□□□□ -0.98
HSPG2-202ENST00000374676 FXYD3Q14802 87 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 TMEM128Q5BJH2 165 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 MZT2BQ6NZ67 158 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 SSX9Q7RTT3 188 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 CENPVQ7Z7K6 275 aaPredicted RBP8.95□□□□□ -0.98
HSPG2-202ENST00000374676 SLC25A42Q86VD7 318 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 STPG2Q8N412 459 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 DMBX1Q8NFW5 382 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 SEC22AQ96IW7 307 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 NOL4LQ96MY1 436 aaPredicted RBP8.95□□□□□ -0.98
HSPG2-202ENST00000374676 GON7Q9BXV9 100 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 ZNF430Q9H8G1 570 aaPredicted RBP8.95□□□□□ -0.98
HSPG2-202ENST00000374676 TMEM140Q9NV12 185 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 NUBP2Q9Y5Y2 271 aa8.95□□□□□ -0.98
HSPG2-202ENST00000374676 TET2Q6N021 2002 aaPredicted RBP8.95□□□□□ -0.98
HSPG2-202ENST00000374676 ARPC1BO15143 372 aaKnown RBP8.94□□□□□ -0.98
HSPG2-202ENST00000374676 ATP6V0E1O15342 81 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 CNIH1O95406 144 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 KRASP01116 189 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 OR5AC1P0C628 307 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 EGR2P11161 476 aaPredicted RBP8.94□□□□□ -0.98
HSPG2-202ENST00000374676 ANXA3P12429 323 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 KRTAP10-3P60369 221 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 NDPQ00604 133 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 TMEM267Q0VDI3 215 aaPredicted RBP8.94□□□□□ -0.98
HSPG2-202ENST00000374676 TMEM187Q14656 261 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 SP6Q3SY56 376 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 AKIRIN2Q53H80 203 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 TMED4Q7Z7H5 227 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 CENPSQ8N2Z9 138 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 C3orf56Q8N813 242 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 OR5AU1Q8NGC0 362 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 SGMS2Q8NHU3 365 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 ARPC1AQ92747 370 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 TMEM56Q96MV1 263 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 PARP11Q9NR21 331 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 TMEM56-RWDD3S4R434 201 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 WNK1Q9H4A3 2382 aa8.94□□□□□ -0.98
HSPG2-202ENST00000374676 TRAV41A0A0B4J266 112 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 PIGBOS1A0A0B4J2F0 54 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 FAM240BA0A1B0GVZ2 78 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 PSMB11A5LHX3 300 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 ACTL6BO94805 426 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 TCRBP04435 133 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 P0C879 139 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 PPIFP30405 207 aaKnown RBP8.93□□□□□ -0.98
HSPG2-202ENST00000374676 G6PCP35575 357 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 RPL8P62917 257 aaKnown RBP8.93□□□□□ -0.98
HSPG2-202ENST00000374676 SLC35B1P78383 322 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 CFHR3Q02985 330 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 TNXAQ16473 311 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 TRIM16LQ309B1 348 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 C19orf54Q5BKX5 351 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 SELENOHQ8IZQ5 122 aaKnown RBP8.93□□□□□ -0.98
HSPG2-202ENST00000374676 COMMD1Q8N668 190 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 MINDY2Q8NBR6 621 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 IL22RA2Q969J5 263 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 TMEM68Q96MH6 324 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 TSC22D3Q99576 134 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 CITED1Q99966 193 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 ALX4Q9H161 411 aaPredicted RBP8.93□□□□□ -0.98
HSPG2-202ENST00000374676 LINC00527Q9UJ94 153 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 FLVCR2Q9UPI3 526 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 FBXO7Q9Y3I1 522 aa8.93□□□□□ -0.98
HSPG2-202ENST00000374676 VWFP04275 2813 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 TRAV3A0A0B4J244 114 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 SNAPC5O75971 98 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 SFT2D2O95562 160 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 IGKV1-5P01602 117 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 OR9G9P0C7N8 305 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 HLA-GP17693 338 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 VDAC1P21796 283 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 DEFA1P59665 94 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 DEFA3P59666 94 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 GNB1P62873 340 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 SRPXP78539 464 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 TEX38Q6PEX7 206 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 SHISA2Q6UWI4 295 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 H2BFWTQ7Z2G1 175 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 FAM219AQ8IW50 185 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 DUSP18Q8NEJ0 188 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 LFNGQ8NES3 379 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 LHFPL5Q8TAF8 219 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 ABHD5Q8WTS1 349 aa8.92□□□□□ -0.98
HSPG2-202ENST00000374676 SRSF12Q8WXF0 261 aaKnown RBP8.92□□□□□ -0.98
HSPG2-202ENST00000374676 RBPMSQ93062 196 aaKnown RBP8.92□□□□□ -0.98
HSPG2-202ENST00000374676 WSB1Q9Y6I7 421 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms