RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 HILPDAQ9Y5L2 63 aa10.04□□□□□ -0.8
DEPDC1-201ENST00000370966 TRAV30A0A087WSZ9 112 aa10.04□□□□□ -0.8
DEPDC1-201ENST00000370966 PPIAL4CA0A0B4J2A2 164 aa10.04□□□□□ -0.8
DEPDC1-201ENST00000370966 C9orf172C9J069 976 aa10.04□□□□□ -0.8
DEPDC1-201ENST00000370966 PPIAL4GP0DN37 164 aa10.04□□□□□ -0.8
DEPDC1-201ENST00000370966 TMEM97Q5BJF2 176 aa10.04□□□□□ -0.8
DEPDC1-201ENST00000370966 ZNF343Q6P1L6 599 aa10.04□□□□□ -0.8
DEPDC1-201ENST00000370966 TMEM116Q8NCL8 245 aa10.04□□□□□ -0.8
DEPDC1-201ENST00000370966 LYZL4Q96KX0 146 aa10.04□□□□□ -0.8
DEPDC1-201ENST00000370966 NABP2Q9BQ15 211 aa10.04□□□□□ -0.8
DEPDC1-201ENST00000370966 FOXD3Q9UJU5 478 aaPredicted RBP10.04□□□□□ -0.8
DEPDC1-201ENST00000370966 CDC42EP3Q9UKI2 254 aa10.04□□□□□ -0.8
DEPDC1-201ENST00000370966 BMPR1BO00238 502 aa10.04□□□□□ -0.8
DEPDC1-201ENST00000370966 ZNF25P17030 456 aaPredicted RBP10.04□□□□□ -0.8
DEPDC1-201ENST00000370966 LBHQ53QV2 105 aaPredicted RBP10.04□□□□□ -0.8
DEPDC1-201ENST00000370966 IGKV3D-15A0A087WSY6 115 aa10.03□□□□□ -0.8
DEPDC1-201ENST00000370966 GCGP01275 180 aa10.03□□□□□ -0.8
DEPDC1-201ENST00000370966 CRYGSP22914 178 aa10.03□□□□□ -0.8
DEPDC1-201ENST00000370966 IGHV1-2P23083 117 aa10.03□□□□□ -0.8
DEPDC1-201ENST00000370966 GTF2H5Q6ZYL4 71 aa10.03□□□□□ -0.8
DEPDC1-201ENST00000370966 LEAP2Q969E1 77 aa10.03□□□□□ -0.8
DEPDC1-201ENST00000370966 CLEC7AQ9BXN2 247 aa10.03□□□□□ -0.8
DEPDC1-201ENST00000370966 PI4KAP42356 2102 aa10.03□□□□□ -0.8
DEPDC1-201ENST00000370966 IGHV2OR16-5A0A0B4J2B6 119 aa10.03□□□□□ -0.8
DEPDC1-201ENST00000370966 IGHV1-69-2A0A0G2JMI3 117 aa10.03□□□□□ -0.8
DEPDC1-201ENST00000370966 PRNTQ86SH4 94 aa10.03□□□□□ -0.8
DEPDC1-201ENST00000370966 RALYQ9UKM9 306 aaKnown RBP10.03□□□□□ -0.8
DEPDC1-201ENST00000370966 CA7P43166 264 aa10.03□□□□□ -0.8
DEPDC1-201ENST00000370966 OR1P1Q8NH06 330 aa10.03□□□□□ -0.8
DEPDC1-201ENST00000370966 DEPPQ9NTK1 212 aa10.03□□□□□ -0.8
DEPDC1-201ENST00000370966 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.02□□□□□ -0.8
DEPDC1-201ENST00000370966 LIPFP07098 398 aa10.02□□□□□ -0.8
DEPDC1-201ENST00000370966 CEACAM1P13688 526 aa10.02□□□□□ -0.8
DEPDC1-201ENST00000370966 CDX1P47902 265 aaPredicted RBP10.02□□□□□ -0.8
DEPDC1-201ENST00000370966 HOXA4Q00056 320 aaPredicted RBP10.02□□□□□ -0.8
DEPDC1-201ENST00000370966 ZIC4Q8N9L1 334 aa10.02□□□□□ -0.8
DEPDC1-201ENST00000370966 RBM14Q96PK6 669 aaKnown RBP10.02□□□□□ -0.8
DEPDC1-201ENST00000370966 SPTAN1Q13813 2472 aaKnown RBP10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 PROB1E7EW31 1015 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 CD40P25942 277 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 MFAP4P55083 255 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 ACSF3Q4G176 576 aaPredicted RBP10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 VN1R17PQ8TDU5 208 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 TBX15Q96SF7 602 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 SLX1AQ9BQ83 275 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 TMEM208Q9BTX3 173 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 OR51M1Q9H341 326 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 DIRC3C9JPN6 131 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 F8VVB4 439 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 F8VWA3 439 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 LDLRAD4O15165 306 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 STPG3Q8N7X2 389 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 GCHFRP30047 84 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 FAM166AQ6J272 317 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 VKORC1L1Q8N0U8 176 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 OR13A1Q8NGR1 328 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 NPCDR1Q9BY65 106 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 GBF1Q92538 1859 aa10.02□□□□□ -0.81
DEPDC1-201ENST00000370966 THSD7BQ9C0I4 1608 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 TCF20Q9UGU0 1960 aaKnown RBP10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 TGIF2-C20orf24A0A0A6YYL0 155 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 PLAUP00749 431 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 ZNF137PP52743 207 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 MEF2CQ06413 473 aaPredicted RBP10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 CLEC2AQ6UVW9 174 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 CYP2G1PQ6ZSU1 146 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 MUC15Q8N387 334 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 LRTM2Q8N967 370 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 MESP1Q9BRJ9 268 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 PAM16Q9Y3D7 125 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 C17orf98A8MV24 154 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 SS18L1O75177 396 aaPredicted RBP10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 CRYBB3P26998 211 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 APOBEC3AP31941 199 aaPredicted RBP10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 NUBP1P53384 320 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 NPIPB3Q92617 1050 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 KBTBD11-OT1A0A1B0GTJ5 212 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 LINC00587B1AMM8 73 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 CLPSP04118 112 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 SLC35B1P78383 322 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 FAM27E3Q08E93 113 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 RPL39P5Q59GN2 51 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 LHFPL1Q86WI0 220 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 C18orf12Q96KH6 178 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 TMEM106BQ9NUM4 274 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 POLEQ07864 2286 aa10.01□□□□□ -0.81
DEPDC1-201ENST00000370966 H0YIZ8 118 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 ACAA1P09110 424 aaPredicted RBP10□□□□□ -0.81
DEPDC1-201ENST00000370966 SRP19P09132 144 aaKnown RBP10□□□□□ -0.81
DEPDC1-201ENST00000370966 PET117Q6UWS5 81 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 BIVMQ86UB2 503 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 TMEM105Q8N8V8 129 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 HSPB9Q9BQS6 159 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 LPAR2Q9HBW0 351 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 FNDC1Q4ZHG4 1894 aaPredicted RBP10□□□□□ -0.81
DEPDC1-201ENST00000370966 TMSB15BA0A087X1C1 80 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 CA2P00918 260 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 RPL7P18124 248 aaKnown RBP10□□□□□ -0.81
DEPDC1-201ENST00000370966 ID3Q02535 119 aa10□□□□□ -0.81
DEPDC1-201ENST00000370966 WDR25Q64LD2 544 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms