RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 MDKP21741 143 aaPredicted RBP11.53□□□□□ -0.56
USF1-202ENST00000368020 LRRC10Q5BKY1 277 aa11.53□□□□□ -0.56
USF1-202ENST00000368020 ADAM5Q6NVV9 412 aa11.53□□□□□ -0.56
USF1-202ENST00000368020 FAM71F2Q6NXP2 309 aa11.53□□□□□ -0.56
USF1-202ENST00000368020 TCF23Q7RTU1 214 aa11.53□□□□□ -0.56
USF1-202ENST00000368020 LYG1Q8N1E2 194 aa11.53□□□□□ -0.56
USF1-202ENST00000368020 C8orf31Q8N9H6 132 aa11.53□□□□□ -0.56
USF1-202ENST00000368020 RNASE6Q93091 150 aaKnown RBP11.53□□□□□ -0.56
USF1-202ENST00000368020 RHOVQ96L33 236 aa11.53□□□□□ -0.56
USF1-202ENST00000368020 WFIKKN1Q96NZ8 548 aa11.53□□□□□ -0.56
USF1-202ENST00000368020 NPCDR1Q9BY65 106 aa11.53□□□□□ -0.56
USF1-202ENST00000368020 ACTR3CQ9C0K3 210 aaPredicted RBP11.53□□□□□ -0.56
USF1-202ENST00000368020 DYNLRB1Q9NP97 96 aa11.53□□□□□ -0.56
USF1-202ENST00000368020 ENY2Q9NPA8 101 aa11.53□□□□□ -0.56
USF1-202ENST00000368020 HEYLQ9NQ87 328 aaPredicted RBP11.53□□□□□ -0.56
USF1-202ENST00000368020 TMEM106BQ9NUM4 274 aa11.53□□□□□ -0.56
USF1-202ENST00000368020 GNG13Q9P2W3 67 aa11.53□□□□□ -0.56
USF1-202ENST00000368020 PRNDQ9UKY0 176 aa11.53□□□□□ -0.56
USF1-202ENST00000368020 COLCA2A8K830 154 aa11.52□□□□□ -0.56
USF1-202ENST00000368020 B9A039 149 aa11.52□□□□□ -0.56
USF1-202ENST00000368020 H3BQ15 152 aa11.52□□□□□ -0.56
USF1-202ENST00000368020 SLC31A2O15432 143 aa11.52□□□□□ -0.56
USF1-202ENST00000368020 IFNA10P01566 189 aa11.52□□□□□ -0.56
USF1-202ENST00000368020 CD1BP29016 333 aa11.52□□□□□ -0.56
USF1-202ENST00000368020 APOBEC3AP31941 199 aaPredicted RBP11.52□□□□□ -0.56
USF1-202ENST00000368020 RPL31P62899 125 aaKnown RBP11.52□□□□□ -0.56
USF1-202ENST00000368020 DLK1P80370 383 aa11.52□□□□□ -0.56
USF1-202ENST00000368020 ACOT6Q3I5F7 207 aaPredicted RBP11.52□□□□□ -0.56
USF1-202ENST00000368020 HEPN1Q6WQI6 88 aa11.52□□□□□ -0.56
USF1-202ENST00000368020 IQCF2Q8IXL9 164 aa11.52□□□□□ -0.56
USF1-202ENST00000368020 RXFP4Q8TDU9 374 aa11.52□□□□□ -0.56
USF1-202ENST00000368020 TVP23CQ96ET8 276 aa11.52□□□□□ -0.56
USF1-202ENST00000368020 ZNF714Q96N38 554 aa11.52□□□□□ -0.56
USF1-202ENST00000368020 MANBALQ9NQG1 85 aa11.52□□□□□ -0.56
USF1-202ENST00000368020 TMEM14BQ9NUH8 114 aa11.52□□□□□ -0.56
USF1-202ENST00000368020 FKBP11Q9NYL4 201 aa11.52□□□□□ -0.56
USF1-202ENST00000368020 KAAG1Q9UBP8 84 aa11.52□□□□□ -0.56
USF1-202ENST00000368020 ZNF257Q9Y2Q1 563 aa11.52□□□□□ -0.56
USF1-202ENST00000368020 SPTAN1Q13813 2472 aaKnown RBP11.52□□□□□ -0.57
USF1-202ENST00000368020 USP9XQ93008 2570 aaPredicted RBP11.52□□□□□ -0.57
USF1-202ENST00000368020 FLNCQ14315 2725 aa11.52□□□□□ -0.57
USF1-202ENST00000368020 SHISA9B4DS77 424 aa11.52□□□□□ -0.57
USF1-202ENST00000368020 CYB5BO43169 146 aa11.52□□□□□ -0.57
USF1-202ENST00000368020 NDUFB3O43676 98 aa11.52□□□□□ -0.57
USF1-202ENST00000368020 CD3EP07766 207 aa11.52□□□□□ -0.57
USF1-202ENST00000368020 VDAC2P45880 294 aaPredicted RBP11.52□□□□□ -0.57
USF1-202ENST00000368020 HOXA1P49639 335 aaPredicted RBP11.52□□□□□ -0.57
USF1-202ENST00000368020 ELLP55199 621 aaPredicted RBP11.52□□□□□ -0.57
USF1-202ENST00000368020 RAB5BP61020 215 aa11.52□□□□□ -0.57
USF1-202ENST00000368020 ZNF726P1Q15940 193 aa11.52□□□□□ -0.57
USF1-202ENST00000368020 AKIRIN2Q53H80 203 aa11.52□□□□□ -0.57
USF1-202ENST00000368020 LCN15Q6UWW0 184 aa11.52□□□□□ -0.57
USF1-202ENST00000368020 SSX9Q7RTT3 188 aa11.52□□□□□ -0.57
USF1-202ENST00000368020 CYB561D1Q8N8Q1 229 aa11.52□□□□□ -0.57
USF1-202ENST00000368020 ITLN2Q8WWU7 325 aaPredicted RBP11.52□□□□□ -0.57
USF1-202ENST00000368020 LHX4Q969G2 390 aa11.52□□□□□ -0.57
USF1-202ENST00000368020 PLPPR2Q96GM1 343 aa11.52□□□□□ -0.57
USF1-202ENST00000368020 SIRT7Q9NRC8 400 aa11.52□□□□□ -0.57
USF1-202ENST00000368020 TCF19Q9Y242 345 aa11.52□□□□□ -0.57
USF1-202ENST00000368020 PRELID1Q9Y255 219 aa11.52□□□□□ -0.57
USF1-202ENST00000368020 WDR83OSQ9Y284 106 aa11.52□□□□□ -0.57
USF1-202ENST00000368020 PUS1Q9Y606 427 aaKnown RBP eCLIP11.52□□□□□ -0.57
USF1-202ENST00000368020 CXorf65A6NEN9 183 aa11.51□□□□□ -0.57
USF1-202ENST00000368020 FNDC10F2Z333 226 aa11.51□□□□□ -0.57
USF1-202ENST00000368020 LINC00205P59089 165 aa11.51□□□□□ -0.57
USF1-202ENST00000368020 HSPE1P61604 102 aaKnown RBP11.51□□□□□ -0.57
USF1-202ENST00000368020 TMEM249Q2WGJ8 235 aa11.51□□□□□ -0.57
USF1-202ENST00000368020 FFAR4Q5NUL3 377 aa11.51□□□□□ -0.57
USF1-202ENST00000368020 OR10G9Q8NGN4 311 aa11.51□□□□□ -0.57
USF1-202ENST00000368020 OR10G7Q8NGN6 311 aa11.51□□□□□ -0.57
USF1-202ENST00000368020 VSIRQ9H7M9 311 aa11.51□□□□□ -0.57
USF1-202ENST00000368020 ICE1Q9Y2F5 2266 aa11.51□□□□□ -0.57
USF1-202ENST00000368020 ZFP92A6NM28 416 aa11.5□□□□□ -0.57
USF1-202ENST00000368020 FSTL3O95633 263 aa11.5□□□□□ -0.57
USF1-202ENST00000368020 APOA2P02652 100 aa11.5□□□□□ -0.57
USF1-202ENST00000368020 PSMB3P49720 205 aa11.5□□□□□ -0.57
USF1-202ENST00000368020 RAB13P51153 203 aa11.5□□□□□ -0.57
USF1-202ENST00000368020 TFF3Q07654 80 aa11.5□□□□□ -0.57
USF1-202ENST00000368020 OR4A47Q6IF82 309 aa11.5□□□□□ -0.57
USF1-202ENST00000368020 DUX4L9Q6RFH8 374 aaPredicted RBP11.5□□□□□ -0.57
USF1-202ENST00000368020 ETV3LQ6ZN32 361 aa11.5□□□□□ -0.57
USF1-202ENST00000368020 ZNF833PQ6ZTB9 187 aa11.5□□□□□ -0.57
USF1-202ENST00000368020 RPP25LQ8N5L8 163 aaKnown RBP11.5□□□□□ -0.57
USF1-202ENST00000368020 ZNF383Q8NA42 475 aa11.5□□□□□ -0.57
USF1-202ENST00000368020 OSR1Q8TAX0 266 aaPredicted RBP11.5□□□□□ -0.57
USF1-202ENST00000368020 RAB1CQ92928 201 aa11.5□□□□□ -0.57
USF1-202ENST00000368020 BIN3Q9NQY0 253 aa11.5□□□□□ -0.57
USF1-202ENST00000368020 RALYQ9UKM9 306 aaKnown RBP11.5□□□□□ -0.57
USF1-202ENST00000368020 YLPM1P49750 1951 aaKnown RBP11.49□□□□□ -0.57
USF1-202ENST00000368020 FAM90A27PA6NNH2 459 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 C1orf196B1AJZ1 125 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 TSPAN9O75954 239 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 CRYBA1P05813 215 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 MAS1LP35410 378 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 GNG10P50151 68 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 CDSNQ15517 529 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 SMUG1Q53HV7 270 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 HIST1H2BAQ96A08 127 aa11.49□□□□□ -0.57
USF1-202ENST00000368020 NEIL1Q96FI4 390 aaPredicted RBP11.49□□□□□ -0.57
USF1-202ENST00000368020 SLC35D1Q9NTN3 355 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms