RNA–Protein interactions for RNA: ENST00000363016.1

RNU6-249P-201, Transcript of RNA, U6 small nuclear 249, pseudogene, humanhuman

BASIC

Gene RNU6-249P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-249P-201ENST00000363016 MCEEQ96PE7 176 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 HIST1H2BNQ99877 126 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 HIST1H2BMQ99879 126 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 TBL1YQ9BQ87 522 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 OVOL2Q9BRP0 275 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 TSSK6Q9BXA6 273 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 SLIRPQ9GZT3 109 aaKnown RBP4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 PLEKHA3Q9HB20 300 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 NPVFQ9HCQ7 196 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 RPS10P5Q9NQ39 176 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 CLCF1Q9UBD9 225 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 AK3Q9UIJ7 227 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 RNF11Q9Y3C5 154 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 AMMECR1Q9Y4X0 333 aaPredicted RBP4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 NEUROG3Q9Y4Z2 214 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 SELENOKQ9Y6D0 94 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 KCNE3Q9Y6H6 103 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 MYO5CQ9NQX4 1742 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 CUX1P39880 1505 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 ARHGAP5Q13017 1502 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 TOPBP1Q92547 1522 aa4.26□□□□□ -1.73
RNU6-249P-201ENST00000363016 ARID2Q68CP9 1835 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 ATG2AQ2TAZ0 1938 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 TRAV27A0A087WT01 109 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 IGHV2-26A0A0B4J1V2 119 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 TEX48A0A1B0GUV7 120 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 IZUMO1RA6ND01 250 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 HMSDA8MTL9 139 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 TMEM250H0YL14 139 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 LY6LH3BQJ8 138 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 UQCRQO14949 82 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 SIX6O95475 246 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 NAPSAO96009 420 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 HRASP01112 189 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 FKBP2P26885 142 aaKnown RBP4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 SELENOPP49908 381 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 B3GALT5-AS1P59052 145 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 PNOCQ13519 176 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 NSUN5P1Q3KNT7 163 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 PRR31Q5SQ13 230 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 CLEC19AQ6UXS0 136 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 RPS19BP1Q86WX3 136 aaKnown RBP4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 LINC00471Q8N535 108 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 ZNF709Q8N972 641 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 OR4X2Q8NGF9 303 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 OR1J4Q8NGS1 313 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 OR51H1Q8NH63 302 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 C2orf15Q8WU43 125 aaKnown RBP4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 APOBEC4Q8WW27 367 aaKnown RBP4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 ELSPBP1Q96BH3 223 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 SLC25A38Q96DW6 304 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 FAM19A4Q96LR4 140 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 IMMP2LQ96T52 175 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 SPRY4Q9C004 299 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 AICDAQ9GZX7 198 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 MAP6D1Q9H9H5 199 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 NTMQ9P121 344 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 RBM12B-AS1Q9P1G2 102 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 ZNF222Q9UK12 451 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 ZNF256Q9Y2P7 627 aaPredicted RBP4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 OR2W1Q9Y3N9 320 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 PYGO1Q9Y3Y4 419 aa4.25□□□□□ -1.73
RNU6-249P-201ENST00000363016 NKTRP30414 1462 aaKnown RBP4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 TTC3P53804 2025 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 CCDC88AQ3V6T2 1871 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 CDK5RAP2Q96SN8 1893 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 SETBP1Q9Y6X0 1596 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 TRIP11Q15643 1979 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 ANKARQ7Z5J8 1434 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 ITGB4P16144 1822 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 LOC100131303A0A0U1RQF7 123 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 FAM236AA0A1B0GUQ0 79 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 FAM236BA0A1B0GV22 79 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 SMIM35A0A1B0GVV1 85 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 TLCD2A6NGC4 264 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 TAX1BP3O14907 124 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 CDK2AP2O75956 126 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 SFT2D2O95562 160 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 GYPAP02724 150 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 RBMY1CP0DJD4 496 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 HLA-DOBP13765 273 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 CACNG7P62955 275 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 SEC11AP67812 179 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 Q0VG73 95 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 FOXI1Q12951 378 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 SRSF9Q13242 221 aaKnown RBP eCLIP4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 CST6Q15828 149 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 PAPPA-AS1Q5QFB9 102 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 FAM222AQ5U5X8 452 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 ZNF880Q6PDB4 577 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 ACP7Q6ZNF0 438 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 Q6ZS92 163 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 MSRB3Q8IXL7 192 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 SAXO1Q8IYX7 474 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 RAB42Q8N4Z0 105 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 SCGB1C1Q8TD33 95 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 MBD6Q96DN6 1003 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 CARD19Q96LW7 228 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 PLA2G12BQ9BX93 195 aa4.24□□□□□ -1.73
RNU6-249P-201ENST00000363016 DEFB127Q9H1M4 99 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms