RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 GLYATL3Q5SZD4 288 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 STUMQ69YW2 141 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 C10orf99Q6UWK7 81 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 WDR82Q6UXN9 313 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 MBOAT2Q6ZWT7 520 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 COMMD1Q8N668 190 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 LYPD6BQ8NI32 183 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 LRRC29Q8WV35 223 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 GAFA1Q96PS6 74 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 GPX7Q96SL4 187 aaPredicted RBP3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 NMNAT3Q96T66 252 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 ADAT1Q9BUB4 502 aaKnown RBP3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 CDCA4Q9BXL8 241 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 HDHD2Q9H0R4 259 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 MTCH1Q9NZJ7 389 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 CCDC59Q9P031 241 aaKnown RBP3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 TBC1D24Q9ULP9 559 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 STARD9Q9P2P6 4700 aa3.63□□□□□ -1.83
RNU4-39P-201ENST00000362455 PLECQ15149 4684 aaKnown RBP3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 HERC2O95714 4834 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 HYDINQ4G0P3 5121 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 TANC2Q9HCD6 1990 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 CDIPTO14735 213 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 GMDSO60547 372 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 NDUFB2O95178 105 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 GNAO1P09471 354 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 SLC2A1P11166 492 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 HIST1H1CP16403 213 aaKnown RBP3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 GPX4P36969 197 aaPredicted RBP3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 OMPP47874 163 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 SELENOWP63302 87 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 FAM3AP98173 230 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 EMX1Q04741 257 aaPredicted RBP3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 TRAM2Q15035 370 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 KCNJ8Q15842 424 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 LRRC75BQ2VPJ9 315 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 DEFB121Q5J5C9 76 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 TEX43Q6ZNM6 134 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 NDUFA11Q86Y39 141 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 LINC00471Q8N535 108 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 OR1M1Q8NGA1 313 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 OR4C13Q8NGP0 309 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 OR4S2Q8NH73 311 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 ANGPTL6Q8NI99 470 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 GIMAP1Q8WWP7 306 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 RASSF5Q8WWW0 418 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 PITX2Q99697 317 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 TLNRD1Q9H1K6 362 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 TMBIM4Q9HC24 238 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 RETNQ9HD89 108 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 CMTM6Q9NX76 183 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 ZNF391Q9UJN7 358 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 ZNF222Q9UK12 451 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 RHBDD3Q9Y3P4 386 aa3.62□□□□□ -1.83
RNU4-39P-201ENST00000362455 CSMD3Q7Z407 3707 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 DOCK11Q5JSL3 2073 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 IGKV1D-17A0A075B6S4 117 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 KBTBD11-OT1A0A1B0GTJ5 212 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 TVP23AA6NH52 213 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 LYRM9A8MSI8 78 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 VGLL3A8MV65 326 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 H0YHG0 523 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 M0R135 149 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 M0R1W7 72 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 BHLHE40O14503 412 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 NUPL2O15504 423 aaKnown RBP3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 FKBP6O75344 327 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 PAHP00439 452 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 SERPINE2P07093 398 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 MUC1P15941 1255 aaPredicted RBP3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 MGMTP16455 207 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 PYCR1P32322 319 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 DLX6P56179 175 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 ZNF726P1Q15940 193 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 MRPL21Q7Z2W9 205 aaKnown RBP3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 ZFP41Q8N8Y5 198 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 OR4S1Q8NGB4 309 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 OR8J3Q8NGG0 315 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 OR9Q1Q8NGQ5 310 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 OR4K13Q8NH42 304 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 C12orf43Q96C57 262 aaKnown RBP3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 ZNF799Q96GE5 643 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 B9D2Q9BPU9 175 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 ACTR3CQ9C0K3 210 aaPredicted RBP3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 SLC22A4Q9H015 551 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 METTL8Q9H825 291 aaKnown RBP3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 RPRD1BQ9NQG5 326 aaKnown RBP3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 C19orf12Q9NSK7 152 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 POLR1DQ9Y2S0 133 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 WSB1Q9Y6I7 421 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 PLXNB1O43157 2135 aa3.61□□□□□ -1.83
RNU4-39P-201ENST00000362455 TRAV25A0A0B4J276 109 aa3.6□□□□□ -1.83
RNU4-39P-201ENST00000362455 GGT3PA6NGU5 568 aa3.6□□□□□ -1.83
RNU4-39P-201ENST00000362455 C11orf94C9JXX5 98 aa3.6□□□□□ -1.83
RNU4-39P-201ENST00000362455 AKR7A2O43488 359 aa3.6□□□□□ -1.83
RNU4-39P-201ENST00000362455 NDUFB3O43676 98 aa3.6□□□□□ -1.83
RNU4-39P-201ENST00000362455 ANGPTL7O43827 346 aa3.6□□□□□ -1.83
RNU4-39P-201ENST00000362455 RAB3DO95716 219 aa3.6□□□□□ -1.83
RNU4-39P-201ENST00000362455 FABP3P05413 133 aa3.6□□□□□ -1.83
RNU4-39P-201ENST00000362455 CCL3L1P16619 93 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms