RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 ARL16Q0P5N6 197 aa17.12■□□□□ 0.33
VRK2-201ENST00000340157 CLINT1Q14677 625 aa17.12■□□□□ 0.33
VRK2-201ENST00000340157 ZNF429Q86V71 674 aa17.12■□□□□ 0.33
VRK2-201ENST00000340157 PUSL1Q8N0Z8 303 aaKnown RBP17.12■□□□□ 0.33
VRK2-201ENST00000340157 OR5C1Q8NGR4 320 aa17.12■□□□□ 0.33
VRK2-201ENST00000340157 FLYWCH2Q96CP2 140 aaKnown RBP17.12■□□□□ 0.33
VRK2-201ENST00000340157 RITA1Q96K30 269 aa17.12■□□□□ 0.33
VRK2-201ENST00000340157 OR4C12Q96R67 309 aa17.12■□□□□ 0.33
VRK2-201ENST00000340157 MAP1AP78559 2803 aaPredicted RBP17.12■□□□□ 0.33
VRK2-201ENST00000340157 RNASEK-C17orf49H0YIS7 233 aa17.12■□□□□ 0.33
VRK2-201ENST00000340157 JTBO76095 146 aa17.12■□□□□ 0.33
VRK2-201ENST00000340157 IGLV2-23P01705 113 aa17.12■□□□□ 0.33
VRK2-201ENST00000340157 METTL15P1P0C7V9 234 aa17.12■□□□□ 0.33
VRK2-201ENST00000340157 MYOD1P15172 320 aa17.12■□□□□ 0.33
VRK2-201ENST00000340157 HOXB4P17483 251 aaPredicted RBP17.12■□□□□ 0.33
VRK2-201ENST00000340157 SULT1A1P50225 295 aa17.12■□□□□ 0.33
VRK2-201ENST00000340157 SPANXN5Q5MJ07 72 aa17.12■□□□□ 0.33
VRK2-201ENST00000340157 PDZD9Q8IXQ8 264 aa17.12■□□□□ 0.33
VRK2-201ENST00000340157 OR4C13Q8NGP0 309 aa17.12■□□□□ 0.33
VRK2-201ENST00000340157 OR52E5Q8NH55 327 aa17.12■□□□□ 0.33
VRK2-201ENST00000340157 TMED6Q8WW62 240 aa17.12■□□□□ 0.33
VRK2-201ENST00000340157 FOXA2Q9Y261 457 aaPredicted RBP17.12■□□□□ 0.33
VRK2-201ENST00000340157 AMMECR1Q9Y4X0 333 aaPredicted RBP17.12■□□□□ 0.33
VRK2-201ENST00000340157 A0A1W2PPI3 338 aa17.11■□□□□ 0.33
VRK2-201ENST00000340157 UPK2O00526 184 aa17.11■□□□□ 0.33
VRK2-201ENST00000340157 SPCS3P61009 180 aa17.11■□□□□ 0.33
VRK2-201ENST00000340157 TMEM14EPQ6UXP3 125 aa17.11■□□□□ 0.33
VRK2-201ENST00000340157 BET1LQ9NYM9 111 aa17.11■□□□□ 0.33
VRK2-201ENST00000340157 POLR3KQ9Y2Y1 108 aaPredicted RBP17.11■□□□□ 0.33
VRK2-201ENST00000340157 NBPF19A0A087WUL8 3843 aa17.11■□□□□ 0.33
VRK2-201ENST00000340157 CEBPZOSA8MTT3 80 aa17.1■□□□□ 0.33
VRK2-201ENST00000340157 FOXH1O75593 365 aa17.1■□□□□ 0.33
VRK2-201ENST00000340157 IFNA17P01571 189 aa17.1■□□□□ 0.33
VRK2-201ENST00000340157 LHFPL4Q7Z7J7 247 aa17.1■□□□□ 0.33
VRK2-201ENST00000340157 RPEQ96AT9 228 aa17.1■□□□□ 0.33
VRK2-201ENST00000340157 LPAR2Q9HBW0 351 aa17.1■□□□□ 0.33
VRK2-201ENST00000340157 PLA2G2EQ9NZK7 142 aa17.1■□□□□ 0.33
VRK2-201ENST00000340157 TCF19Q9Y242 345 aa17.1■□□□□ 0.33
VRK2-201ENST00000340157 HELZ2Q9BYK8 2649 aaKnown RBP17.1■□□□□ 0.33
VRK2-201ENST00000340157 MC5RP33032 325 aa17.1■□□□□ 0.33
VRK2-201ENST00000340157 RAB13P51153 203 aa17.1■□□□□ 0.33
VRK2-201ENST00000340157 TPTE2P1Q5T6R2 138 aa17.1■□□□□ 0.33
VRK2-201ENST00000340157 STX12Q86Y82 276 aa17.1■□□□□ 0.33
VRK2-201ENST00000340157 TBX15Q96SF7 602 aa17.1■□□□□ 0.33
VRK2-201ENST00000340157 INSIG2Q9Y5U4 225 aa17.1■□□□□ 0.33
VRK2-201ENST00000340157 ABCA12Q86UK0 2595 aa17.09■□□□□ 0.33
VRK2-201ENST00000340157 A0A1W2PRD5 423 aa17.09■□□□□ 0.33
VRK2-201ENST00000340157 A0A1W2PRF3 423 aa17.09■□□□□ 0.33
VRK2-201ENST00000340157 A0A1W2PRM7 423 aa17.09■□□□□ 0.33
VRK2-201ENST00000340157 LINC00862A6NCI5 91 aa17.09■□□□□ 0.33
VRK2-201ENST00000340157 HTR1DP28221 377 aa17.09■□□□□ 0.33
VRK2-201ENST00000340157 VDAC2P45880 294 aaPredicted RBP17.09■□□□□ 0.33
VRK2-201ENST00000340157 RAB14P61106 215 aa17.09■□□□□ 0.33
VRK2-201ENST00000340157 MS4A7Q9GZW8 240 aaPredicted RBP17.09■□□□□ 0.33
VRK2-201ENST00000340157 KBTBD11O94819 623 aa17.08■□□□□ 0.33
VRK2-201ENST00000340157 RPS16P62249 146 aaKnown RBP17.08■□□□□ 0.33
VRK2-201ENST00000340157 MOB3BQ86TA1 216 aa17.08■□□□□ 0.33
VRK2-201ENST00000340157 STPG2Q8N412 459 aa17.08■□□□□ 0.33
VRK2-201ENST00000340157 CXorf58Q96LI9 332 aa17.08■□□□□ 0.33
VRK2-201ENST00000340157 GINS3Q9BRX5 216 aa17.08■□□□□ 0.33
VRK2-201ENST00000340157 SLC25A32Q9H2D1 315 aa17.08■□□□□ 0.33
VRK2-201ENST00000340157 DPM3Q9P2X0 92 aa17.08■□□□□ 0.33
VRK2-201ENST00000340157 NUP50Q9UKX7 468 aa17.08■□□□□ 0.33
VRK2-201ENST00000340157 BORCS7-ASMTA0A0B4J1R7 106 aa17.07■□□□□ 0.32
VRK2-201ENST00000340157 PMS2P5A8MQ11 134 aa17.07■□□□□ 0.32
VRK2-201ENST00000340157 PLXNB1O43157 2135 aa17.07■□□□□ 0.32
VRK2-201ENST00000340157 PAX6P26367 422 aa17.07■□□□□ 0.32
VRK2-201ENST00000340157 DVL1P1P54792 670 aaPredicted RBP17.07■□□□□ 0.32
VRK2-201ENST00000340157 EIF5AP63241 154 aaKnown RBP17.07■□□□□ 0.32
VRK2-201ENST00000340157 CIB3Q96Q77 187 aaPredicted RBP17.07■□□□□ 0.32
VRK2-201ENST00000340157 LEUTXA8MZ59 168 aa17.07■□□□□ 0.32
VRK2-201ENST00000340157 FBXO24O75426 580 aa17.07■□□□□ 0.32
VRK2-201ENST00000340157 TOX4O94842 621 aa17.07■□□□□ 0.32
VRK2-201ENST00000340157 FAM157CP0CG43 387 aa17.07■□□□□ 0.32
VRK2-201ENST00000340157 HSPE1P61604 102 aaKnown RBP17.07■□□□□ 0.32
VRK2-201ENST00000340157 MRGPRG-AS1Q2M3A8 158 aa17.07■□□□□ 0.32
VRK2-201ENST00000340157 OR1S2Q8NGQ3 325 aa17.07■□□□□ 0.32
VRK2-201ENST00000340157 AIFM2Q9BRQ8 373 aa17.07■□□□□ 0.32
VRK2-201ENST00000340157 SH3BGRL3Q9H299 93 aa17.07■□□□□ 0.32
VRK2-201ENST00000340157 PRNDQ9UKY0 176 aa17.07■□□□□ 0.32
VRK2-201ENST00000340157 OR51B2Q9Y5P1 312 aa17.07■□□□□ 0.32
VRK2-201ENST00000340157 C15orf62A8K5M9 175 aa17.06■□□□□ 0.32
VRK2-201ENST00000340157 C17orf50Q8WW18 174 aa17.06■□□□□ 0.32
VRK2-201ENST00000340157 ATP5SQ99766 215 aa17.06■□□□□ 0.32
VRK2-201ENST00000340157 TPSG1Q9NRR2 321 aa17.06■□□□□ 0.32
VRK2-201ENST00000340157 HILPDAQ9Y5L2 63 aa17.06■□□□□ 0.32
VRK2-201ENST00000340157 RFNGQ9Y644 331 aa17.06■□□□□ 0.32
VRK2-201ENST00000340157 AUP1Q9Y679 476 aa17.06■□□□□ 0.32
VRK2-201ENST00000340157 APCP25054 2843 aa17.06■□□□□ 0.32
VRK2-201ENST00000340157 TIMM23O14925 209 aa17.05■□□□□ 0.32
VRK2-201ENST00000340157 CNTFRP26992 372 aa17.05■□□□□ 0.32
VRK2-201ENST00000340157 DYNAPQ8N1N2 210 aa17.05■□□□□ 0.32
VRK2-201ENST00000340157 HSD17B11Q8NBQ5 300 aa17.05■□□□□ 0.32
VRK2-201ENST00000340157 TMEM167AQ8TBQ9 72 aa17.05■□□□□ 0.32
VRK2-201ENST00000340157 CFHR4Q92496 578 aa17.05■□□□□ 0.32
VRK2-201ENST00000340157 ZNF257Q9Y2Q1 563 aa17.05■□□□□ 0.32
VRK2-201ENST00000340157 STRAPQ9Y3F4 350 aaKnown RBP17.05■□□□□ 0.32
VRK2-201ENST00000340157 CELSR1Q9NYQ6 3014 aa17.05■□□□□ 0.32
VRK2-201ENST00000340157 FGF16O43320 207 aa17.05■□□□□ 0.32
VRK2-201ENST00000340157 SPP1P10451 314 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms