RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 TRBV7-9A0A0J9YWB2 115 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 PEX7O00628 323 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 SYNGR3O43761 229 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 DXOO77932 396 aaKnown RBP8.39□□□□□ -1.07
COL4A6-201ENST00000334504 HOXC4P09017 264 aaPredicted RBP8.39□□□□□ -1.07
COL4A6-201ENST00000334504 RPL23P62829 140 aaKnown RBP8.39□□□□□ -1.07
COL4A6-201ENST00000334504 SAMD5Q5TGI4 173 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 LAIR2Q6ISS4 152 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 LRTM2Q8N967 370 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 CT55Q8WUE5 264 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 RPP21Q9H633 154 aaKnown RBP8.39□□□□□ -1.07
COL4A6-201ENST00000334504 DLL3Q9NYJ7 618 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 TCF19Q9Y242 345 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 MOSP00540 346 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 LIFP15018 202 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 MC5RP33032 325 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 CCDC144NLQ6NUI1 221 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 TIMP4Q99727 224 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 NUP205Q92621 2012 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 RNF222A6NCQ9 220 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 OR2K2Q8NGT1 345 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 SFXN3Q9BWM7 321 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 ADAMTSL3P82987 1691 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 TRAV24A0A0B4J272 114 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 FAM90A10PA6NDY2 464 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 FAM90A18PA6NE21 464 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 FAM90A16PA6NEW6 464 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 FAM90A20PA6NIJ5 464 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 FAM90A8PA6NJQ4 464 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 FAM90A7PA6NKC0 464 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 FAM90A22PA8MWA6 464 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 FAM90A12PA8MX19 464 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 FAM90A5PA8MXJ8 464 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 FAM90A23PA8MXZ1 464 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 FAM90A15PP0C7V4 464 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 FAM90A13PP0C7W8 464 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 FAM90A14PP0C7W9 464 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 FAM90A24PP0C7X0 464 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 TJP1Q07157 1748 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 DDX60LQ5H9U9 1706 aaKnown RBP8.38□□□□□ -1.07
COL4A6-201ENST00000334504 FAM27BQ5VT28 67 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 CALYQ9NYX4 217 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 MPV17P39210 176 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 GAGE2BQ13066 116 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 GAGE13Q4V321 117 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 GAGE2EQ4V326 116 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 C1orf185Q5T7R7 199 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 PEAR1Q5VY43 1037 aaPredicted RBP8.38□□□□□ -1.07
COL4A6-201ENST00000334504 ZNF826PQ6ZT77 177 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 NPIPB3Q92617 1050 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 LEAP2Q969E1 77 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 PKIBQ9C010 78 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 GAGE2DQ9UEU5 116 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 ICAM4Q14773 271 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 ZNF585BQ52M93 769 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 WDR82Q6UXN9 313 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 Q96M66 194 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 HIST1H2BLQ99880 126 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 PLA2G2FQ9BZM2 168 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 IDI2-AS1Q9NZ38 188 aa8.38□□□□□ -1.07
COL4A6-201ENST00000334504 FAM181BA6NEQ2 426 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 A8MWV9 139 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 ZNF721Q8TF20 911 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 COLQQ9Y215 455 aaPredicted RBP8.37□□□□□ -1.07
COL4A6-201ENST00000334504 DOCK2Q92608 1830 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 ZFC3H1O60293 1989 aaKnown RBP8.37□□□□□ -1.07
COL4A6-201ENST00000334504 TRAV30A0A087WSZ9 112 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 A0A1B0GUT8 65 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 TMEM155Q4W5P6 130 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 TPTE2P1Q5T6R2 138 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 GFI1BQ5VTD9 330 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 FBXW9Q5XUX1 488 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 PCSK4Q6UW60 755 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 SPEM1Q8N4L4 309 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 IGLV1-36A0A0B4J1U3 117 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 hCG_38984A0A1B0GV85 526 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 GPX4P36969 197 aaPredicted RBP8.37□□□□□ -1.07
COL4A6-201ENST00000334504 ZNF146Q15072 292 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 HIST3H2BBQ8N257 126 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 NAA38Q9BRA0 125 aaKnown RBP8.37□□□□□ -1.07
COL4A6-201ENST00000334504 COL9A1P20849 921 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 UNQ5815/PRO19632Q6UWF5 114 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 OR10W1Q8NGF6 305 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 G6PC2Q9NQR9 355 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 CNTRLQ7Z7A1 2325 aa8.37□□□□□ -1.07
COL4A6-201ENST00000334504 RBMY1BA6NDE4 496 aaKnown RBP8.36□□□□□ -1.07
COL4A6-201ENST00000334504 RBMY1EA6NEQ0 496 aaKnown RBP8.36□□□□□ -1.07
COL4A6-201ENST00000334504 RBMY1DP0C7P1 496 aaKnown RBP8.36□□□□□ -1.07
COL4A6-201ENST00000334504 RBMY1A1P0DJD3 496 aaKnown RBP8.36□□□□□ -1.07
COL4A6-201ENST00000334504 RBMY1CP0DJD4 496 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 ZNF658BQ4V348 819 aaPredicted RBP8.36□□□□□ -1.07
COL4A6-201ENST00000334504 ZNF479Q96JC4 524 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 GTSF1LQ9H1H1 148 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 ZNF646O15015 1829 aaPredicted RBP8.36□□□□□ -1.07
COL4A6-201ENST00000334504 C9JCJ5 164 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.36□□□□□ -1.07
COL4A6-201ENST00000334504 M0R381 172 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 PEBP1P30086 187 aaKnown RBP8.36□□□□□ -1.07
COL4A6-201ENST00000334504 C2orf88Q9BSF0 95 aa8.36□□□□□ -1.07
COL4A6-201ENST00000334504 PF4V1P10720 104 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms