RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 UBTD1Q9HAC8 227 aa14.56□□□□□ -0.08
GABRB3-202ENST00000311550 IGHV1-2P23083 117 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 DDTP30046 118 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 GBGT1Q8N5D6 347 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 PRR7Q8TB68 274 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 TNFRSF19Q9NS68 423 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 F5H697 171 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 J3QW42 95 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 CRYGSP22914 178 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 PAFAH1B2P68402 229 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 ZNF525Q8N782 197 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 ZNF430Q9H8G1 570 aaPredicted RBP14.55□□□□□ -0.08
GABRB3-202ENST00000311550 IGKV1-27A0A075B6S5 117 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 F2RL2O00254 374 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 CA2P00918 260 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 CCL20P78556 96 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 ESPL1Q14674 2120 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 TRBV6-7A0A0A0MS04 114 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 TMEM250H0YL14 139 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 ZNF788Q6ZQV5 615 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 LHFPL1Q86WI0 220 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 OR8A1Q8NGG7 326 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 REG4Q9BYZ8 158 aa14.55□□□□□ -0.08
GABRB3-202ENST00000311550 C8orf88P0DMB2 117 aa14.54□□□□□ -0.08
GABRB3-202ENST00000311550 SFRP2Q96HF1 295 aa14.54□□□□□ -0.08
GABRB3-202ENST00000311550 DNAJC4Q9NNZ3 241 aa14.54□□□□□ -0.08
GABRB3-202ENST00000311550 GCHFRP30047 84 aa14.54□□□□□ -0.08
GABRB3-202ENST00000311550 SPSB4Q96A44 273 aa14.54□□□□□ -0.08
GABRB3-202ENST00000311550 FOXD3Q9UJU5 478 aaPredicted RBP14.54□□□□□ -0.08
GABRB3-202ENST00000311550 GCGP01275 180 aa14.54□□□□□ -0.08
GABRB3-202ENST00000311550 RPLP1P05386 114 aaKnown RBP14.54□□□□□ -0.08
GABRB3-202ENST00000311550 MC5RP33032 325 aa14.54□□□□□ -0.08
GABRB3-202ENST00000311550 PHF3Q92576 2039 aaKnown RBP14.54□□□□□ -0.08
GABRB3-202ENST00000311550 C5orf24Q7Z6I8 188 aa14.54□□□□□ -0.08
GABRB3-202ENST00000311550 DIRC2Q96SL1 478 aa14.54□□□□□ -0.08
GABRB3-202ENST00000311550 CYTL1Q9NRR1 136 aa14.54□□□□□ -0.08
GABRB3-202ENST00000311550 FAM117AQ9C073 453 aa14.54□□□□□ -0.08
GABRB3-202ENST00000311550 TRAV24A0A0B4J272 114 aa14.53□□□□□ -0.08
GABRB3-202ENST00000311550 SELENOTP62341 195 aa14.53□□□□□ -0.08
GABRB3-202ENST00000311550 CBLN1P23435 193 aa14.53□□□□□ -0.08
GABRB3-202ENST00000311550 LOC389332A0A1B0GUA5 103 aa14.53□□□□□ -0.08
GABRB3-202ENST00000311550 C9orf172C9J069 976 aa14.53□□□□□ -0.08
GABRB3-202ENST00000311550 M0QZ24 198 aa14.53□□□□□ -0.08
GABRB3-202ENST00000311550 MT-ND6P03923 174 aa14.53□□□□□ -0.08
GABRB3-202ENST00000311550 DOLPP1Q86YN1 238 aa14.53□□□□□ -0.08
GABRB3-202ENST00000311550 NPIPB3Q92617 1050 aa14.53□□□□□ -0.08
GABRB3-202ENST00000311550 SSBP3Q9BWW4 388 aaPredicted RBP14.53□□□□□ -0.08
GABRB3-202ENST00000311550 IL6RP08887 468 aaPredicted RBP14.53□□□□□ -0.08
GABRB3-202ENST00000311550 MMD2Q8IY49 270 aa14.53□□□□□ -0.08
GABRB3-202ENST00000311550 FAM131CQ96AQ9 280 aa14.53□□□□□ -0.08
GABRB3-202ENST00000311550 SNRNP40Q96DI7 357 aaKnown RBP14.53□□□□□ -0.08
GABRB3-202ENST00000311550 PNRC2Q9NPJ4 139 aaKnown RBP14.53□□□□□ -0.08
GABRB3-202ENST00000311550 C1RLQ9NZP8 487 aa14.53□□□□□ -0.08
GABRB3-202ENST00000311550 A8MWL6 223 aa14.53□□□□□ -0.08
GABRB3-202ENST00000311550 CD55P08174 381 aa14.53□□□□□ -0.08
GABRB3-202ENST00000311550 ZNF581Q9P0T4 197 aa14.53□□□□□ -0.08
GABRB3-202ENST00000311550 M0QZK8 103 aa14.52□□□□□ -0.08
GABRB3-202ENST00000311550 GGCTO75223 188 aaKnown RBP14.52□□□□□ -0.08
GABRB3-202ENST00000311550 ATP5G3P48201 142 aa14.52□□□□□ -0.08
GABRB3-202ENST00000311550 FAM27E3Q08E93 113 aa14.52□□□□□ -0.08
GABRB3-202ENST00000311550 ICAM4Q14773 271 aa14.52□□□□□ -0.08
GABRB3-202ENST00000311550 PEAR1Q5VY43 1037 aaPredicted RBP14.52□□□□□ -0.08
GABRB3-202ENST00000311550 PCSK4Q6UW60 755 aa14.52□□□□□ -0.08
GABRB3-202ENST00000311550 C19orf35Q6ZS72 473 aa14.52□□□□□ -0.08
GABRB3-202ENST00000311550 WDYHV1Q96HA8 205 aa14.52□□□□□ -0.08
GABRB3-202ENST00000311550 EAF1Q96JC9 268 aaPredicted RBP14.52□□□□□ -0.08
GABRB3-202ENST00000311550 SRIP30626 198 aa14.52□□□□□ -0.09
GABRB3-202ENST00000311550 SSX8Q7RTT4 187 aa14.52□□□□□ -0.09
GABRB3-202ENST00000311550 VOPP1Q96AW1 172 aa14.52□□□□□ -0.09
GABRB3-202ENST00000311550 DMRT1Q9Y5R6 373 aa14.52□□□□□ -0.09
GABRB3-202ENST00000311550 ZNF729A6NN14 1252 aaPredicted RBP14.52□□□□□ -0.09
GABRB3-202ENST00000311550 IFNL4K9M1U5 179 aa14.52□□□□□ -0.09
GABRB3-202ENST00000311550 FAM216BQ8N7L0 139 aa14.52□□□□□ -0.09
GABRB3-202ENST00000311550 RAMP3O60896 148 aa14.51□□□□□ -0.09
GABRB3-202ENST00000311550 ZFP36L1Q07352 338 aaKnown RBP14.51□□□□□ -0.09
GABRB3-202ENST00000311550 GPR179Q6PRD1 2367 aa14.51□□□□□ -0.09
GABRB3-202ENST00000311550 WISP1O95388 367 aa14.51□□□□□ -0.09
GABRB3-202ENST00000311550 TNFSF10P50591 281 aa14.51□□□□□ -0.09
GABRB3-202ENST00000311550 ZNF146Q15072 292 aa14.51□□□□□ -0.09
GABRB3-202ENST00000311550 CENPWQ5EE01 88 aa14.51□□□□□ -0.09
GABRB3-202ENST00000311550 CYP2G1PQ6ZSU1 146 aa14.51□□□□□ -0.09
GABRB3-202ENST00000311550 CLDN16Q9Y5I7 305 aa14.51□□□□□ -0.09
GABRB3-202ENST00000311550 SLC17A3O00476 420 aa14.51□□□□□ -0.09
GABRB3-202ENST00000311550 GGNQ86UU5 652 aa14.51□□□□□ -0.09
GABRB3-202ENST00000311550 OR4D5Q8NGN0 318 aa14.51□□□□□ -0.09
GABRB3-202ENST00000311550 GRAMD2BQ96HH9 432 aa14.51□□□□□ -0.09
GABRB3-202ENST00000311550 GP6Q9HCN6 339 aa14.51□□□□□ -0.09
GABRB3-202ENST00000311550 IGHV2OR16-5A0A0B4J2B6 119 aa14.51□□□□□ -0.09
GABRB3-202ENST00000311550 HLA-DQA1P01909 254 aa14.5□□□□□ -0.09
GABRB3-202ENST00000311550 IGFBP2P18065 325 aa14.5□□□□□ -0.09
GABRB3-202ENST00000311550 ERVFRD-1P60508 538 aa14.5□□□□□ -0.09
GABRB3-202ENST00000311550 PGLYRP4Q96LB8 373 aa14.5□□□□□ -0.09
GABRB3-202ENST00000311550 CBLN4Q9NTU7 201 aa14.5□□□□□ -0.09
GABRB3-202ENST00000311550 MRPS18CQ9Y3D5 142 aaKnown RBP14.5□□□□□ -0.09
GABRB3-202ENST00000311550 ROS1P08922 2347 aa14.5□□□□□ -0.09
GABRB3-202ENST00000311550 MOSP00540 346 aa14.5□□□□□ -0.09
GABRB3-202ENST00000311550 CGAP01215 116 aa14.5□□□□□ -0.09
GABRB3-202ENST00000311550 QRFPP83859 136 aa14.5□□□□□ -0.09
GABRB3-202ENST00000311550 OR4C13Q8NGP0 309 aa14.5□□□□□ -0.09
GABRB3-202ENST00000311550 SDF2L1Q9HCN8 221 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms