RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 LDLRAD2Q5SZI1 272 aa18.48■□□□□ 0.55
PTX3-201ENST00000295927 RPEQ96AT9 228 aa18.48■□□□□ 0.55
PTX3-201ENST00000295927 SIRPDQ9H106 197 aa18.48■□□□□ 0.55
PTX3-201ENST00000295927 TMEM14BQ9NUH8 114 aa18.48■□□□□ 0.55
PTX3-201ENST00000295927 FOXA2Q9Y261 457 aaPredicted RBP18.48■□□□□ 0.55
PTX3-201ENST00000295927 ASH1LQ9NR48 2969 aaKnown RBP18.47■□□□□ 0.55
PTX3-201ENST00000295927 IGHV3-72A0A0B4J1Y9 119 aa18.47■□□□□ 0.55
PTX3-201ENST00000295927 IGHV4-61A0A0C4DH41 118 aa18.47■□□□□ 0.55
PTX3-201ENST00000295927 J3QKU1 62 aa18.47■□□□□ 0.55
PTX3-201ENST00000295927 PAX1P15863 534 aa18.47■□□□□ 0.55
PTX3-201ENST00000295927 RPS16P62249 146 aaKnown RBP18.47■□□□□ 0.55
PTX3-201ENST00000295927 ZNF787Q6DD87 383 aa18.47■□□□□ 0.55
PTX3-201ENST00000295927 TMEM14EPQ6UXP3 125 aa18.47■□□□□ 0.55
PTX3-201ENST00000295927 PUSL1Q8N0Z8 303 aaKnown RBP18.47■□□□□ 0.55
PTX3-201ENST00000295927 OR1S2Q8NGQ3 325 aa18.47■□□□□ 0.55
PTX3-201ENST00000295927 OR4C12Q96R67 309 aa18.47■□□□□ 0.55
PTX3-201ENST00000295927 BET1LQ9NYM9 111 aa18.47■□□□□ 0.55
PTX3-201ENST00000295927 MED13LQ71F56 2210 aa18.47■□□□□ 0.55
PTX3-201ENST00000295927 ODF3BA8MYP8 253 aa18.47■□□□□ 0.55
PTX3-201ENST00000295927 FAM157AC9JC47 383 aa18.47■□□□□ 0.55
PTX3-201ENST00000295927 HTR1DP28221 377 aa18.47■□□□□ 0.55
PTX3-201ENST00000295927 ARL16Q0P5N6 197 aa18.47■□□□□ 0.55
PTX3-201ENST00000295927 MS4A7Q9GZW8 240 aaPredicted RBP18.47■□□□□ 0.55
PTX3-201ENST00000295927 CACFD1Q9UGQ2 172 aa18.47■□□□□ 0.55
PTX3-201ENST00000295927 TCF19Q9Y242 345 aa18.47■□□□□ 0.55
PTX3-201ENST00000295927 WNK2Q9Y3S1 2297 aa18.46■□□□□ 0.55
PTX3-201ENST00000295927 IGHV4-30-2A0A087WSY4 118 aa18.46■□□□□ 0.55
PTX3-201ENST00000295927 MOB3BQ86TA1 216 aa18.46■□□□□ 0.55
PTX3-201ENST00000295927 HAPLN4Q86UW8 402 aa18.46■□□□□ 0.55
PTX3-201ENST00000295927 PDZD9Q8IXQ8 264 aa18.46■□□□□ 0.55
PTX3-201ENST00000295927 GINS3Q9BRX5 216 aa18.46■□□□□ 0.55
PTX3-201ENST00000295927 FBXO24O75426 580 aa18.45■□□□□ 0.54
PTX3-201ENST00000295927 ZNF266Q14584 549 aa18.45■□□□□ 0.54
PTX3-201ENST00000295927 TPTE2P1Q5T6R2 138 aa18.45■□□□□ 0.54
PTX3-201ENST00000295927 EIF5AL1Q6IS14 154 aaKnown RBP18.45■□□□□ 0.54
PTX3-201ENST00000295927 DPM3Q9P2X0 92 aa18.45■□□□□ 0.54
PTX3-201ENST00000295927 PRNDQ9UKY0 176 aa18.45■□□□□ 0.54
PTX3-201ENST00000295927 STRAPQ9Y3F4 350 aaKnown RBP18.45■□□□□ 0.54
PTX3-201ENST00000295927 USP9YO00507 2555 aaPredicted RBP18.45■□□□□ 0.54
PTX3-201ENST00000295927 LEUTXA8MZ59 168 aa18.45■□□□□ 0.54
PTX3-201ENST00000295927 RNASEK-C17orf49H0YIS7 233 aa18.45■□□□□ 0.54
PTX3-201ENST00000295927 MYOD1P15172 320 aa18.45■□□□□ 0.54
PTX3-201ENST00000295927 HOXB4P17483 251 aaPredicted RBP18.45■□□□□ 0.54
PTX3-201ENST00000295927 HSPE1P61604 102 aaKnown RBP18.45■□□□□ 0.54
PTX3-201ENST00000295927 RITA1Q96K30 269 aa18.45■□□□□ 0.54
PTX3-201ENST00000295927 ATP5SQ99766 215 aa18.45■□□□□ 0.54
PTX3-201ENST00000295927 LPAR2Q9HBW0 351 aa18.45■□□□□ 0.54
PTX3-201ENST00000295927 POLR3KQ9Y2Y1 108 aaPredicted RBP18.45■□□□□ 0.54
PTX3-201ENST00000295927 OR51B2Q9Y5P1 312 aa18.45■□□□□ 0.54
PTX3-201ENST00000295927 A0A1W2PRD5 423 aa18.44■□□□□ 0.54
PTX3-201ENST00000295927 A0A1W2PRF3 423 aa18.44■□□□□ 0.54
PTX3-201ENST00000295927 A0A1W2PRM7 423 aa18.44■□□□□ 0.54
PTX3-201ENST00000295927 KBTBD11O94819 623 aa18.44■□□□□ 0.54
PTX3-201ENST00000295927 IGLV2-23P01705 113 aa18.44■□□□□ 0.54
PTX3-201ENST00000295927 STPG2Q8N412 459 aa18.44■□□□□ 0.54
PTX3-201ENST00000295927 CXorf58Q96LI9 332 aa18.44■□□□□ 0.54
PTX3-201ENST00000295927 A0A1W2PPI3 338 aa18.43■□□□□ 0.54
PTX3-201ENST00000295927 TOX4O94842 621 aa18.43■□□□□ 0.54
PTX3-201ENST00000295927 VDAC2P45880 294 aaPredicted RBP18.43■□□□□ 0.54
PTX3-201ENST00000295927 DVL1P1P54792 670 aaPredicted RBP18.43■□□□□ 0.54
PTX3-201ENST00000295927 HBG1P69891 147 aa18.43■□□□□ 0.54
PTX3-201ENST00000295927 HBG2P69892 147 aa18.43■□□□□ 0.54
PTX3-201ENST00000295927 LHFPL4Q7Z7J7 247 aa18.43■□□□□ 0.54
PTX3-201ENST00000295927 HSD17B11Q8NBQ5 300 aa18.43■□□□□ 0.54
PTX3-201ENST00000295927 FBN2P35556 2912 aa18.43■□□□□ 0.54
PTX3-201ENST00000295927 TNCP24821 2201 aa18.43■□□□□ 0.54
PTX3-201ENST00000295927 LY86O95711 162 aa18.43■□□□□ 0.54
PTX3-201ENST00000295927 CEACAM3P40198 252 aa18.43■□□□□ 0.54
PTX3-201ENST00000295927 KRTAP10-9P60411 292 aa18.43■□□□□ 0.54
PTX3-201ENST00000295927 OR8G2PQ6IF36 304 aa18.43■□□□□ 0.54
PTX3-201ENST00000295927 CLCC1Q96S66 551 aa18.43■□□□□ 0.54
PTX3-201ENST00000295927 HEYLQ9NQ87 328 aaPredicted RBP18.43■□□□□ 0.54
PTX3-201ENST00000295927 ABCA2Q9BZC7 2435 aa18.43■□□□□ 0.54
PTX3-201ENST00000295927 DFFBO76075 338 aa18.42■□□□□ 0.54
PTX3-201ENST00000295927 FAM157CP0CG43 387 aa18.42■□□□□ 0.54
PTX3-201ENST00000295927 LGALS7P47929 136 aa18.42■□□□□ 0.54
PTX3-201ENST00000295927 HOXA1P49639 335 aaPredicted RBP18.42■□□□□ 0.54
PTX3-201ENST00000295927 DSCR9P59020 149 aa18.42■□□□□ 0.54
PTX3-201ENST00000295927 VSTM2AQ8TAG5 236 aa18.42■□□□□ 0.54
PTX3-201ENST00000295927 RNF141Q8WVD5 230 aa18.42■□□□□ 0.54
PTX3-201ENST00000295927 TBX15Q96SF7 602 aa18.42■□□□□ 0.54
PTX3-201ENST00000295927 HIPK2Q9H2X6 1198 aa18.42■□□□□ 0.54
PTX3-201ENST00000295927 PLA2G2EQ9NZK7 142 aa18.42■□□□□ 0.54
PTX3-201ENST00000295927 ZNF257Q9Y2Q1 563 aa18.42■□□□□ 0.54
PTX3-201ENST00000295927 HILPDAQ9Y5L2 63 aa18.42■□□□□ 0.54
PTX3-201ENST00000295927 AUP1Q9Y679 476 aa18.42■□□□□ 0.54
PTX3-201ENST00000295927 TENM4Q6N022 2769 aa18.41■□□□□ 0.54
PTX3-201ENST00000295927 FGF16O43320 207 aa18.41■□□□□ 0.54
PTX3-201ENST00000295927 FGF2P09038 288 aa18.41■□□□□ 0.54
PTX3-201ENST00000295927 SPP1P10451 314 aa18.41■□□□□ 0.54
PTX3-201ENST00000295927 TMEM167AQ8TBQ9 72 aa18.41■□□□□ 0.54
PTX3-201ENST00000295927 TSNAXQ99598 290 aaKnown RBP18.41■□□□□ 0.54
PTX3-201ENST00000295927 SH3BGRL3Q9H299 93 aa18.41■□□□□ 0.54
PTX3-201ENST00000295927 FKBP11Q9NYL4 201 aa18.41■□□□□ 0.54
PTX3-201ENST00000295927 TEX50A0A1B0GTY4 177 aa18.41■□□□□ 0.54
PTX3-201ENST00000295927 C15orf62A8K5M9 175 aa18.41■□□□□ 0.54
PTX3-201ENST00000295927 PMS2P5A8MQ11 134 aa18.41■□□□□ 0.54
PTX3-201ENST00000295927 SEC11BP0C7V7 166 aa18.41■□□□□ 0.54
PTX3-201ENST00000295927 USF1P22415 310 aaPredicted RBP18.41■□□□□ 0.54
PTX3-201ENST00000295927 SLC38A11Q08AI6 406 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms