RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 NEU1Q99519 415 aa14.67□□□□□ -0.06
SHANK1-201ENST00000293441 SH3BGRL3Q9H299 93 aa14.67□□□□□ -0.06
SHANK1-201ENST00000293441 MOB4Q9Y3A3 225 aa14.67□□□□□ -0.06
SHANK1-201ENST00000293441 H7C2G1 150 aa14.67□□□□□ -0.06
SHANK1-201ENST00000293441 CFDP00746 253 aaPredicted RBP14.67□□□□□ -0.06
SHANK1-201ENST00000293441 C7orf66A4D0T2 115 aa14.67□□□□□ -0.06
SHANK1-201ENST00000293441 AMY1AP04745 511 aa14.67□□□□□ -0.06
SHANK1-201ENST00000293441 SPTBP11277 2137 aa14.67□□□□□ -0.06
SHANK1-201ENST00000293441 GALNT14Q96FL9 552 aa14.67□□□□□ -0.06
SHANK1-201ENST00000293441 J3QW42 95 aa14.67□□□□□ -0.06
SHANK1-201ENST00000293441 HSPB1P04792 205 aaKnown RBP14.67□□□□□ -0.06
SHANK1-201ENST00000293441 KLK2P20151 261 aa14.67□□□□□ -0.06
SHANK1-201ENST00000293441 DLX6P56179 175 aa14.67□□□□□ -0.06
SHANK1-201ENST00000293441 IFT22Q9H7X7 185 aa14.67□□□□□ -0.06
SHANK1-201ENST00000293441 C1orf162Q8NEQ5 155 aaPredicted RBP14.67□□□□□ -0.06
SHANK1-201ENST00000293441 CRYBB3P26998 211 aa14.66□□□□□ -0.06
SHANK1-201ENST00000293441 GPR82Q96P67 336 aa14.66□□□□□ -0.06
SHANK1-201ENST00000293441 ZNF646O15015 1829 aaPredicted RBP14.66□□□□□ -0.06
SHANK1-201ENST00000293441 NPIPB13A6NJU9 1138 aa14.66□□□□□ -0.06
SHANK1-201ENST00000293441 FOXI3A8MTJ6 420 aaPredicted RBP14.66□□□□□ -0.06
SHANK1-201ENST00000293441 NPIPB4C9JG80 1138 aa14.66□□□□□ -0.06
SHANK1-201ENST00000293441 TMEM262E9PQX1 116 aa14.66□□□□□ -0.06
SHANK1-201ENST00000293441 MEF2BQ02080 365 aaPredicted RBP14.66□□□□□ -0.06
SHANK1-201ENST00000293441 TMEM187Q14656 261 aa14.66□□□□□ -0.06
SHANK1-201ENST00000293441 ELOVL1Q9BW60 279 aa14.66□□□□□ -0.06
SHANK1-201ENST00000293441 DIRC3C9JPN6 131 aa14.66□□□□□ -0.06
SHANK1-201ENST00000293441 RPL24P83731 157 aaKnown RBP14.66□□□□□ -0.06
SHANK1-201ENST00000293441 PRB3Q04118 309 aaPredicted RBP14.66□□□□□ -0.06
SHANK1-201ENST00000293441 C1QTNF12Q5T7M4 302 aa14.66□□□□□ -0.06
SHANK1-201ENST00000293441 DPM3Q9P2X0 92 aa14.66□□□□□ -0.06
SHANK1-201ENST00000293441 LINC00305Q7Z4B0 112 aa14.66□□□□□ -0.06
SHANK1-201ENST00000293441 GOLT1AQ6ZVE7 132 aa14.66□□□□□ -0.06
SHANK1-201ENST00000293441 RAB37Q96AX2 223 aa14.66□□□□□ -0.06
SHANK1-201ENST00000293441 IMMP1LQ96LU5 166 aa14.66□□□□□ -0.06
SHANK1-201ENST00000293441 TMEM14DPA8MWL7 114 aa14.65□□□□□ -0.06
SHANK1-201ENST00000293441 C1QL2Q7Z5L3 287 aa14.65□□□□□ -0.06
SHANK1-201ENST00000293441 TP53RKQ96S44 253 aa14.65□□□□□ -0.06
SHANK1-201ENST00000293441 ABCA7Q8IZY2 2146 aa14.65□□□□□ -0.06
SHANK1-201ENST00000293441 NABP2Q9BQ15 211 aa14.65□□□□□ -0.06
SHANK1-201ENST00000293441 MAP1LC3AQ9H492 121 aa14.65□□□□□ -0.06
SHANK1-201ENST00000293441 A6NDN8 102 aa14.65□□□□□ -0.06
SHANK1-201ENST00000293441 CA2P00918 260 aa14.65□□□□□ -0.06
SHANK1-201ENST00000293441 FAM159AQ6UWV7 190 aa14.65□□□□□ -0.06
SHANK1-201ENST00000293441 ITLN2Q8WWU7 325 aaPredicted RBP14.65□□□□□ -0.06
SHANK1-201ENST00000293441 ARL6IP6Q8N6S5 226 aa14.65□□□□□ -0.06
SHANK1-201ENST00000293441 RARRES2Q99969 163 aa14.65□□□□□ -0.06
SHANK1-201ENST00000293441 RALGAPA2Q2PPJ7 1873 aa14.65□□□□□ -0.06
SHANK1-201ENST00000293441 RPS20P60866 119 aaKnown RBP14.65□□□□□ -0.06
SHANK1-201ENST00000293441 KLK15Q9H2R5 256 aa14.65□□□□□ -0.06
SHANK1-201ENST00000293441 SIAH2O43255 324 aa14.64□□□□□ -0.07
SHANK1-201ENST00000293441 RNASE1P07998 156 aaKnown RBP14.64□□□□□ -0.07
SHANK1-201ENST00000293441 ADIPOQQ15848 244 aa14.64□□□□□ -0.07
SHANK1-201ENST00000293441 MRPL14Q6P1L8 145 aaKnown RBP14.64□□□□□ -0.07
SHANK1-201ENST00000293441 RNASE6Q93091 150 aaKnown RBP14.64□□□□□ -0.07
SHANK1-201ENST00000293441 ATG101Q9BSB4 218 aa14.64□□□□□ -0.07
SHANK1-201ENST00000293441 A0A087X0M5 115 aa14.64□□□□□ -0.07
SHANK1-201ENST00000293441 A0A1B0GX30 115 aa14.64□□□□□ -0.07
SHANK1-201ENST00000293441 IFITM3Q01628 133 aa14.64□□□□□ -0.07
SHANK1-201ENST00000293441 ABLIM2Q6H8Q1 611 aa14.64□□□□□ -0.07
SHANK1-201ENST00000293441 ZNF837Q96EG3 531 aaPredicted RBP14.64□□□□□ -0.07
SHANK1-201ENST00000293441 CDC42EP3Q9UKI2 254 aa14.64□□□□□ -0.07
SHANK1-201ENST00000293441 LOC285556D6RIA3 1793 aa14.64□□□□□ -0.07
SHANK1-201ENST00000293441 ACAA1P09110 424 aaPredicted RBP14.64□□□□□ -0.07
SHANK1-201ENST00000293441 PSG7Q13046 419 aa14.64□□□□□ -0.07
SHANK1-201ENST00000293441 TRPM7Q96QT4 1865 aa14.64□□□□□ -0.07
SHANK1-201ENST00000293441 TM4SF5O14894 197 aa14.64□□□□□ -0.07
SHANK1-201ENST00000293441 PPP1R27Q86WC6 154 aa14.64□□□□□ -0.07
SHANK1-201ENST00000293441 SMIM8Q96KF7 97 aa14.64□□□□□ -0.07
SHANK1-201ENST00000293441 FBXL7Q9UJT9 491 aa14.64□□□□□ -0.07
SHANK1-201ENST00000293441 LINC00862A6NCI5 91 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 RAB9AP51151 201 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 CD69Q07108 199 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 CD200R1LQ6Q8B3 271 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 ZNF383Q8NA42 475 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 MBNL2Q5VZF2 373 aaKnown RBP14.63□□□□□ -0.07
SHANK1-201ENST00000293441 SPACA3Q8IXA5 215 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 FOXA2Q9Y261 457 aaPredicted RBP14.63□□□□□ -0.07
SHANK1-201ENST00000293441 C9JCJ5 164 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 NPFFO15130 113 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 SIGLEC5O15389 551 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 RPS11P62280 158 aaKnown RBP eCLIP14.63□□□□□ -0.07
SHANK1-201ENST00000293441 CYP2G1PQ6ZSU1 146 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 POC1AQ8NBT0 407 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 OR4X2Q8NGF9 303 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 FBLIM1Q8WUP2 373 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 A0A0B4J293 547 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 C12orf77C9JDV5 145 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 EFEMP2O95967 443 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 LHX2P50458 406 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 SPSB4Q96A44 273 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 SMDT1Q9H4I9 107 aa14.63□□□□□ -0.07
SHANK1-201ENST00000293441 NRIP2Q9BQI9 281 aa14.62□□□□□ -0.07
SHANK1-201ENST00000293441 GCGP01275 180 aa14.62□□□□□ -0.07
SHANK1-201ENST00000293441 OR13A1Q8NGR1 328 aa14.62□□□□□ -0.07
SHANK1-201ENST00000293441 C17orf100A8MU93 164 aa14.62□□□□□ -0.07
SHANK1-201ENST00000293441 PROB1E7EW31 1015 aa14.62□□□□□ -0.07
SHANK1-201ENST00000293441 CSRP1P21291 193 aaKnown RBP14.62□□□□□ -0.07
SHANK1-201ENST00000293441 MRPL32Q9BYC8 188 aaKnown RBP14.62□□□□□ -0.07
SHANK1-201ENST00000293441 UCP3P55916 312 aa14.61□□□□□ -0.07
SHANK1-201ENST00000293441 ARPC1AQ92747 370 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms