RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 IGHG4P01861 327 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 TRGV3P03979 118 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 CD74P04233 296 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 SERPINE2P07093 398 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 CRYGBP07316 175 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 NQO2P16083 231 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 CD33P20138 364 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 F2RP25116 425 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 G6PCP35575 357 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 ECI1P42126 302 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 AKR1C2P52895 323 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 UCP3P55916 312 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 TAS2R31P59538 309 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 EIF4EBP1Q13541 118 aaPredicted RBP5.12□□□□□ -1.59
CD44-204ENST00000279452 TRIM16LQ309B1 348 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 DEFB136Q30KP8 78 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 OR4A47Q6IF82 309 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 C18orf65Q6ZTR6 163 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 CCDC190Q86UF4 302 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 ZNF695Q8IW36 515 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 TCTEX1D1Q8N7M0 179 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 OR5T1Q8NG75 326 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 OR51S1Q8NGJ8 323 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 OR5M8Q8NGP6 311 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 OR6Q1Q8NGQ2 317 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 OR13C8Q8NGS7 320 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 TERB2Q8NHR7 220 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 WIPF2Q8TF74 440 aaPredicted RBP5.12□□□□□ -1.59
CD44-204ENST00000279452 SRSF12Q8WXF0 261 aaKnown RBP5.12□□□□□ -1.59
CD44-204ENST00000279452 DUX3Q96PT4 197 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 PRRT1Q99946 306 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 HINT2Q9BX68 163 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 COMMD5Q9GZQ3 224 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 PLEKHA2Q9HB19 425 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 ZFP57Q9NU63 452 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 COMMD9Q9P000 198 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 SCP2D1Q9UJQ7 156 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 C3orf85A0A1B0GTC6 90 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 C13orf42A0A1B0GVH6 325 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 HMX3A6NHT5 357 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 MARCH11A6NNE9 402 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 ADARB2-AS1A8MUL3 147 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 SNAPC5O75971 98 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 IGHV3-11P01762 117 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 HLA-GP17693 338 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 PTBP1P26599 531 aaKnown RBP eCLIP5.11□□□□□ -1.59
CD44-204ENST00000279452 PSMB8P28062 276 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 RPL27AP46776 148 aaKnown RBP5.11□□□□□ -1.59
CD44-204ENST00000279452 MECP2P51608 486 aaKnown RBP5.11□□□□□ -1.59
CD44-204ENST00000279452 BRWD1-AS2P59051 145 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 OR2B8PP59922 312 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 RPL8P62917 257 aaKnown RBP5.11□□□□□ -1.59
CD44-204ENST00000279452 DEFA5Q01523 94 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 CFHR3Q02985 330 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 ZNF79Q15937 498 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 AKIRIN2Q53H80 203 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 H2BFWTQ7Z2G1 175 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 TMED4Q7Z7H5 227 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 LHFPL1Q86WI0 220 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 C1QL4Q86Z23 238 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 OR4A5Q8NH83 315 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 TMEM167AQ8TBQ9 72 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 DPF1Q92782 380 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 MRGPRFQ96AM1 343 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 ZNF486Q96H40 463 aaPredicted RBP5.11□□□□□ -1.59
CD44-204ENST00000279452 SPIN2AQ99865 258 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 SPIN2BQ9BPZ2 258 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 KLK15Q9H2R5 256 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 ZNF580Q9UK33 172 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 NSG2Q9Y328 171 aa5.11□□□□□ -1.59
CD44-204ENST00000279452 TRAV3A0A0B4J244 114 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 H0Y980 276 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 UPK2O00526 184 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 SOX15O60248 233 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 ATG12O94817 140 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 IGLV1-40P01703 118 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 PRH1P02810 166 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 REG1AP05451 166 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 CTSDP07339 412 aaPredicted RBP5.1□□□□□ -1.59
CD44-204ENST00000279452 OR9G9P0C7N8 305 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 ZNF735P0CB33 412 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 EGR2P11161 476 aaPredicted RBP5.1□□□□□ -1.59
CD44-204ENST00000279452 DEFA4P12838 97 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 MYOD1P15172 320 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 AKR1C4P17516 323 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 PPIFP30405 207 aaKnown RBP5.1□□□□□ -1.59
CD44-204ENST00000279452 MAS1LP35410 378 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 ETV6P41212 452 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 RAB9AP51151 201 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 CRIP2P52943 208 aaPredicted RBP5.1□□□□□ -1.59
CD44-204ENST00000279452 SSBP2P81877 361 aaPredicted RBP5.1□□□□□ -1.59
CD44-204ENST00000279452 KLF9Q13886 244 aaPredicted RBP5.1□□□□□ -1.59
CD44-204ENST00000279452 SURF2Q15527 256 aaPredicted RBP5.1□□□□□ -1.59
CD44-204ENST00000279452 CNPY1Q3B7I2 92 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 SP6Q3SY56 376 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 TET2Q6N021 2002 aaPredicted RBP5.1□□□□□ -1.59
CD44-204ENST00000279452 SGPP2Q8IWX5 399 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 PUSL1Q8N0Z8 303 aaKnown RBP5.1□□□□□ -1.59
CD44-204ENST00000279452 GDPD1Q8N9F7 314 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 MINDY2Q8NBR6 621 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms