RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 TMEM186Q96B77 213 aa13.54□□□□□ -0.24
CCDC40-201ENST00000269318 TIMM9Q9Y5J7 89 aa13.54□□□□□ -0.24
CCDC40-201ENST00000269318 DOCK11Q5JSL3 2073 aa13.53□□□□□ -0.24
CCDC40-201ENST00000269318 BTBD17A6NE02 478 aa13.53□□□□□ -0.24
CCDC40-201ENST00000269318 SCAF4O95104 1147 aaKnown RBP13.53□□□□□ -0.24
CCDC40-201ENST00000269318 MDKP21741 143 aaPredicted RBP13.53□□□□□ -0.24
CCDC40-201ENST00000269318 TAGLNQ01995 201 aaKnown RBP13.53□□□□□ -0.24
CCDC40-201ENST00000269318 DIAPH2-AS1Q14236 149 aa13.53□□□□□ -0.24
CCDC40-201ENST00000269318 SVBPQ8N300 66 aa13.53□□□□□ -0.24
CCDC40-201ENST00000269318 TMEM133Q9H2Q1 129 aa13.53□□□□□ -0.24
CCDC40-201ENST00000269318 VSIRQ9H7M9 311 aa13.53□□□□□ -0.24
CCDC40-201ENST00000269318 RPRMQ9NS64 109 aa13.53□□□□□ -0.24
CCDC40-201ENST00000269318 TET2Q6N021 2002 aaPredicted RBP13.53□□□□□ -0.24
CCDC40-201ENST00000269318 A0A1B0GV50 99 aa13.52□□□□□ -0.24
CCDC40-201ENST00000269318 UPK2O00526 184 aa13.52□□□□□ -0.24
CCDC40-201ENST00000269318 REG1BP48304 166 aa13.52□□□□□ -0.24
CCDC40-201ENST00000269318 HSPE1P61604 102 aaKnown RBP13.52□□□□□ -0.24
CCDC40-201ENST00000269318 TLE4Q04727 773 aa13.52□□□□□ -0.24
CCDC40-201ENST00000269318 ABHD12Q8N2K0 398 aa13.52□□□□□ -0.24
CCDC40-201ENST00000269318 C8orf46Q8TAG6 207 aa13.52□□□□□ -0.24
CCDC40-201ENST00000269318 OSR1Q8TAX0 266 aaPredicted RBP13.52□□□□□ -0.24
CCDC40-201ENST00000269318 TMEM170AQ8WVE7 144 aa13.52□□□□□ -0.24
CCDC40-201ENST00000269318 CLCC1Q96S66 551 aa13.52□□□□□ -0.24
CCDC40-201ENST00000269318 NABP2Q9BQ15 211 aa13.52□□□□□ -0.24
CCDC40-201ENST00000269318 HEYLQ9NQ87 328 aaPredicted RBP13.52□□□□□ -0.24
CCDC40-201ENST00000269318 DCHS2Q6V1P9 2916 aa13.52□□□□□ -0.24
CCDC40-201ENST00000269318 TPRP12270 2363 aaKnown RBP13.52□□□□□ -0.25
CCDC40-201ENST00000269318 F12P00748 615 aaPredicted RBP13.52□□□□□ -0.25
CCDC40-201ENST00000269318 APOA2P02652 100 aa13.52□□□□□ -0.25
CCDC40-201ENST00000269318 RPP30P78346 268 aaKnown RBP13.52□□□□□ -0.25
CCDC40-201ENST00000269318 PEA15Q15121 130 aa13.52□□□□□ -0.25
CCDC40-201ENST00000269318 TMEM177Q53S58 311 aa13.52□□□□□ -0.25
CCDC40-201ENST00000269318 SUN5Q8TC36 379 aa13.52□□□□□ -0.25
CCDC40-201ENST00000269318 NKX6-2Q9C056 277 aaPredicted RBP13.52□□□□□ -0.25
CCDC40-201ENST00000269318 BET1LQ9NYM9 111 aa13.52□□□□□ -0.25
CCDC40-201ENST00000269318 MIOXQ9UGB7 285 aa13.52□□□□□ -0.25
CCDC40-201ENST00000269318 TRAV1-1A0A0B4J248 108 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 PRSS46E5RG02 174 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 C19orf84I3L1E1 186 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 RRHO14718 337 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 WDR25Q64LD2 544 aaPredicted RBP13.51□□□□□ -0.25
CCDC40-201ENST00000269318 OR8B3Q8NGG8 313 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 SFT2D1Q8WV19 159 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 NEIL1Q96FI4 390 aaPredicted RBP13.51□□□□□ -0.25
CCDC40-201ENST00000269318 OR8B2Q96RD0 313 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 AIFM2Q9BRQ8 373 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 PBDC1Q9BVG4 233 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 KIAA1456Q9P272 454 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 PRNDQ9UKY0 176 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 ZNF257Q9Y2Q1 563 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 TMA7Q9Y2S6 64 aaKnown RBP13.51□□□□□ -0.25
CCDC40-201ENST00000269318 IFNA10P01566 189 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 RBP4P02753 201 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 SAA1P0DJI8 122 aaPredicted RBP13.51□□□□□ -0.25
CCDC40-201ENST00000269318 MYOD1P15172 320 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 HOXA1P49639 335 aaPredicted RBP13.51□□□□□ -0.25
CCDC40-201ENST00000269318 ZNF726P1Q15940 193 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 RAB1CQ92928 201 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 TNFRSF14Q92956 283 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 EIF5A2Q9GZV4 153 aaKnown RBP13.51□□□□□ -0.25
CCDC40-201ENST00000269318 OR51B2Q9Y5P1 312 aa13.51□□□□□ -0.25
CCDC40-201ENST00000269318 PPIAL4CA0A0B4J2A2 164 aa13.5□□□□□ -0.25
CCDC40-201ENST00000269318 PPIAL4GP0DN37 164 aa13.5□□□□□ -0.25
CCDC40-201ENST00000269318 IGFBP2P18065 325 aa13.5□□□□□ -0.25
CCDC40-201ENST00000269318 FGF7P21781 194 aa13.5□□□□□ -0.25
CCDC40-201ENST00000269318 PPT1P50897 306 aa13.5□□□□□ -0.25
CCDC40-201ENST00000269318 TMEM41BQ5BJD5 291 aa13.5□□□□□ -0.25
CCDC40-201ENST00000269318 PDPNQ86YL7 162 aa13.5□□□□□ -0.25
CCDC40-201ENST00000269318 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.5□□□□□ -0.25
CCDC40-201ENST00000269318 LY6G5BQ8NDX9 201 aa13.5□□□□□ -0.25
CCDC40-201ENST00000269318 TIMD4Q96H15 378 aa13.5□□□□□ -0.25
CCDC40-201ENST00000269318 PCGF1Q9BSM1 259 aa13.5□□□□□ -0.25
CCDC40-201ENST00000269318 IGHV2-26A0A0B4J1V2 119 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 H7C2Y5 167 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 KBTBD11O94819 623 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 IGLV1-47P01700 117 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 HBE1P02100 147 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 ETV3LQ6ZN32 361 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 MBD3L1Q8WWY6 194 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 RCC1LQ96I51 464 aaKnown RBP13.49□□□□□ -0.25
CCDC40-201ENST00000269318 HARBI1Q96MB7 349 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 CHODLQ9H9P2 273 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 A0A1W2PPH5 198 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 DNASE2O00115 360 aaPredicted RBP13.49□□□□□ -0.25
CCDC40-201ENST00000269318 DLX1P56177 255 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 PRCDQ00LT1 54 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 ACSM6Q6P461 480 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 SSX7Q7RTT5 188 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 TGIF2LXQ8IUE1 241 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 Q8N7P7 452 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 LHX4Q969G2 390 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 FLYWCH2Q96CP2 140 aaKnown RBP13.49□□□□□ -0.25
CCDC40-201ENST00000269318 RARRES2Q99969 163 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 GGACTQ9BVM4 153 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 NPCDR1Q9BY65 106 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 SMDT1Q9H4I9 107 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 WDR83OSQ9Y284 106 aa13.49□□□□□ -0.25
CCDC40-201ENST00000269318 MALRD1Q5VYJ5 2156 aa13.48□□□□□ -0.25
CCDC40-201ENST00000269318 RBFOX3A6NFN3 312 aa13.48□□□□□ -0.25
CCDC40-201ENST00000269318 C22orf46C9J442 243 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms