RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 BSPH1Q075Z2 132 aa14.08□□□□□ -0.15
PHRF1-201ENST00000264555 LRP11Q86VZ4 500 aa14.08□□□□□ -0.15
PHRF1-201ENST00000264555 FAM216BQ8N7L0 139 aa14.08□□□□□ -0.15
PHRF1-201ENST00000264555 TICRRQ7Z2Z1 1910 aa14.08□□□□□ -0.15
PHRF1-201ENST00000264555 M0R2Z0 102 aa14.08□□□□□ -0.16
PHRF1-201ENST00000264555 EIF3GO75821 320 aaKnown RBP eCLIP14.08□□□□□ -0.16
PHRF1-201ENST00000264555 CFPP27918 469 aa14.08□□□□□ -0.16
PHRF1-201ENST00000264555 C5orf63A6NC05 138 aa14.08□□□□□ -0.16
PHRF1-201ENST00000264555 LIPFP07098 398 aa14.08□□□□□ -0.16
PHRF1-201ENST00000264555 MEF2CQ06413 473 aaPredicted RBP14.08□□□□□ -0.16
PHRF1-201ENST00000264555 CA2P00918 260 aa14.08□□□□□ -0.16
PHRF1-201ENST00000264555 PARLQ9H300 379 aa14.08□□□□□ -0.16
PHRF1-201ENST00000264555 NOTCH4Q99466 2003 aa14.08□□□□□ -0.16
PHRF1-201ENST00000264555 TMEM42Q69YG0 159 aa14.07□□□□□ -0.16
PHRF1-201ENST00000264555 STPG3Q8N7X2 389 aa14.07□□□□□ -0.16
PHRF1-201ENST00000264555 MDKP21741 143 aaPredicted RBP14.07□□□□□ -0.16
PHRF1-201ENST00000264555 ZNF324BQ6AW86 544 aaPredicted RBP14.07□□□□□ -0.16
PHRF1-201ENST00000264555 WDFY1Q8IWB7 410 aa14.07□□□□□ -0.16
PHRF1-201ENST00000264555 LINC01560Q8TB33 94 aa14.07□□□□□ -0.16
PHRF1-201ENST00000264555 HIST1H2BAQ96A08 127 aa14.07□□□□□ -0.16
PHRF1-201ENST00000264555 EP300Q09472 2414 aaPredicted RBP14.07□□□□□ -0.16
PHRF1-201ENST00000264555 PCSK4Q6UW60 755 aa14.07□□□□□ -0.16
PHRF1-201ENST00000264555 NABP2Q9BQ15 211 aa14.07□□□□□ -0.16
PHRF1-201ENST00000264555 GVINP1Q7Z2Y8 2422 aa14.07□□□□□ -0.16
PHRF1-201ENST00000264555 TGIF2-C20orf24A0A0A6YYL0 155 aa14.07□□□□□ -0.16
PHRF1-201ENST00000264555 MT-ND6P03923 174 aa14.07□□□□□ -0.16
PHRF1-201ENST00000264555 ARF6P62330 175 aa14.07□□□□□ -0.16
PHRF1-201ENST00000264555 IBA57Q5T440 356 aaKnown RBP14.07□□□□□ -0.16
PHRF1-201ENST00000264555 C19orf35Q6ZS72 473 aa14.07□□□□□ -0.16
PHRF1-201ENST00000264555 OR2D3Q8NGH3 330 aa14.07□□□□□ -0.16
PHRF1-201ENST00000264555 OR4A5Q8NH83 315 aa14.07□□□□□ -0.16
PHRF1-201ENST00000264555 MDS2Q8NDY4 140 aa14.06□□□□□ -0.16
PHRF1-201ENST00000264555 SUPT4H1P63272 117 aaKnown RBP14.06□□□□□ -0.16
PHRF1-201ENST00000264555 ID3Q02535 119 aa14.06□□□□□ -0.16
PHRF1-201ENST00000264555 OR4A47Q6IF82 309 aa14.06□□□□□ -0.16
PHRF1-201ENST00000264555 ZNF525Q8N782 197 aa14.06□□□□□ -0.16
PHRF1-201ENST00000264555 DNAJC13O75165 2243 aa14.06□□□□□ -0.16
PHRF1-201ENST00000264555 LOC105371242A0A075B767 164 aa14.06□□□□□ -0.16
PHRF1-201ENST00000264555 IGHV1-18A0A0C4DH31 117 aa14.06□□□□□ -0.16
PHRF1-201ENST00000264555 C17orf100A8MU93 164 aa14.06□□□□□ -0.16
PHRF1-201ENST00000264555 YPEL1O60688 119 aa14.06□□□□□ -0.16
PHRF1-201ENST00000264555 ELOBQ15370 118 aa14.06□□□□□ -0.16
PHRF1-201ENST00000264555 RNF151Q2KHN1 245 aa14.06□□□□□ -0.16
PHRF1-201ENST00000264555 GBGT1Q8N5D6 347 aa14.06□□□□□ -0.16
PHRF1-201ENST00000264555 YPEL2Q96QA6 119 aa14.06□□□□□ -0.16
PHRF1-201ENST00000264555 MRPL32Q9BYC8 188 aaKnown RBP14.06□□□□□ -0.16
PHRF1-201ENST00000264555 MED12Q93074 2177 aa14.06□□□□□ -0.16
PHRF1-201ENST00000264555 DNASE2O00115 360 aaPredicted RBP14.06□□□□□ -0.16
PHRF1-201ENST00000264555 FGF16O43320 207 aa14.06□□□□□ -0.16
PHRF1-201ENST00000264555 PLAUP00749 431 aa14.06□□□□□ -0.16
PHRF1-201ENST00000264555 SNRNP40Q96DI7 357 aaKnown RBP14.06□□□□□ -0.16
PHRF1-201ENST00000264555 C19orf67A6NJJ6 358 aa14.05□□□□□ -0.16
PHRF1-201ENST00000264555 ORM1P02763 201 aa14.05□□□□□ -0.16
PHRF1-201ENST00000264555 NAGKQ9UJ70 344 aa14.05□□□□□ -0.16
PHRF1-201ENST00000264555 LINC00312Q9Y6C7 94 aa14.05□□□□□ -0.16
PHRF1-201ENST00000264555 PRNTQ86SH4 94 aa14.05□□□□□ -0.16
PHRF1-201ENST00000264555 OR4D5Q8NGN0 318 aa14.05□□□□□ -0.16
PHRF1-201ENST00000264555 GATAD1Q8WUU5 269 aa14.05□□□□□ -0.16
PHRF1-201ENST00000264555 CNOT1A5YKK6 2376 aaKnown RBP14.05□□□□□ -0.16
PHRF1-201ENST00000264555 PGPA6NDG6 321 aa14.05□□□□□ -0.16
PHRF1-201ENST00000264555 A8MWL6 223 aa14.05□□□□□ -0.16
PHRF1-201ENST00000264555 MFAP2P55001 183 aa14.05□□□□□ -0.16
PHRF1-201ENST00000264555 RNF144BQ7Z419 303 aa14.05□□□□□ -0.16
PHRF1-201ENST00000264555 BPIFA4PQ86YQ2 179 aa14.05□□□□□ -0.16
PHRF1-201ENST00000264555 NCOR1O75376 2440 aa14.05□□□□□ -0.16
PHRF1-201ENST00000264555 OR2J3O76001 311 aa14.05□□□□□ -0.16
PHRF1-201ENST00000264555 IL18BPO95998 194 aa14.05□□□□□ -0.16
PHRF1-201ENST00000264555 SNRPCP09234 159 aaKnown RBP14.05□□□□□ -0.16
PHRF1-201ENST00000264555 AGAP20933 346 aa14.05□□□□□ -0.16
PHRF1-201ENST00000264555 PLSCR4Q9NRQ2 329 aa14.05□□□□□ -0.16
PHRF1-201ENST00000264555 TRBV23-1A0A0A0MS06 115 aa14.04□□□□□ -0.16
PHRF1-201ENST00000264555 LY6G6EA0A0G2JKS1 128 aa14.04□□□□□ -0.16
PHRF1-201ENST00000264555 GCHFRP30047 84 aa14.04□□□□□ -0.16
PHRF1-201ENST00000264555 CLEC2AQ6UVW9 174 aa14.04□□□□□ -0.16
PHRF1-201ENST00000264555 ZNF383Q8NA42 475 aa14.04□□□□□ -0.16
PHRF1-201ENST00000264555 OR51G1Q8NGK1 321 aa14.04□□□□□ -0.16
PHRF1-201ENST00000264555 U3KQA8 63 aa14.04□□□□□ -0.16
PHRF1-201ENST00000264555 CSN3P07498 182 aa14.04□□□□□ -0.16
PHRF1-201ENST00000264555 IL6RP08887 468 aaPredicted RBP14.04□□□□□ -0.16
PHRF1-201ENST00000264555 OR51M1Q9H341 326 aa14.04□□□□□ -0.16
PHRF1-201ENST00000264555 SRP19P09132 144 aaKnown RBP14.04□□□□□ -0.16
PHRF1-201ENST00000264555 NHLH1Q02575 133 aa14.04□□□□□ -0.16
PHRF1-201ENST00000264555 PNKDQ8N490 385 aa14.04□□□□□ -0.16
PHRF1-201ENST00000264555 NPIPB3Q92617 1050 aa14.04□□□□□ -0.16
PHRF1-201ENST00000264555 OR5AL1P0C617 328 aa14.04□□□□□ -0.16
PHRF1-201ENST00000264555 FCER1GP30273 86 aa14.04□□□□□ -0.16
PHRF1-201ENST00000264555 DNM1P46Q6ZS02 220 aa14.04□□□□□ -0.16
PHRF1-201ENST00000264555 RPL29P47914 159 aaKnown RBP14.04□□□□□ -0.16
PHRF1-201ENST00000264555 CLEC5AQ9NY25 188 aa14.04□□□□□ -0.16
PHRF1-201ENST00000264555 TRAV30A0A087WSZ9 112 aa14.03□□□□□ -0.16
PHRF1-201ENST00000264555 VENTXO95231 258 aa14.03□□□□□ -0.16
PHRF1-201ENST00000264555 FAM87AP0C7U9 286 aa14.03□□□□□ -0.16
PHRF1-201ENST00000264555 RBM14Q96PK6 669 aaKnown RBP14.03□□□□□ -0.16
PHRF1-201ENST00000264555 TEX50A0A1B0GTY4 177 aa14.03□□□□□ -0.16
PHRF1-201ENST00000264555 REG1AP05451 166 aa14.03□□□□□ -0.16
PHRF1-201ENST00000264555 MRPL37Q9BZE1 423 aaKnown RBP14.03□□□□□ -0.16
PHRF1-201ENST00000264555 MFAP4P55083 255 aa14.03□□□□□ -0.16
PHRF1-201ENST00000264555 FOXF2Q12947 444 aa14.03□□□□□ -0.16
PHRF1-201ENST00000264555 A0A087X0M5 115 aa14.03□□□□□ -0.16
PHRF1-201ENST00000264555 A0A1B0GX30 115 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms