RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 SPTA1P02549 2419 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 DEFB121Q5J5C9 76 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 YBX2Q9Y2T7 364 aaKnown RBP9.78□□□□□ -0.84
PTPN4-201ENST00000263708 CTDSPLO15194 276 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 HOXD4P09016 255 aaPredicted RBP9.78□□□□□ -0.84
PTPN4-201ENST00000263708 SSBP3Q9BWW4 388 aaPredicted RBP9.78□□□□□ -0.84
PTPN4-201ENST00000263708 TNFSF18Q9UNG2 199 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 IGHV1-69-2A0A0G2JMI3 117 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 A0A1W2PQD3 144 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 CXorf65A6NEN9 183 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 TMEM249Q2WGJ8 235 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 FAM71F2Q6NXP2 309 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 DDA1Q9BW61 102 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 PLSCR2Q9NRY7 297 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 CTSSP25774 331 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 ADAMTSL1Q8N6G6 1762 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 PRR19A6NJB7 356 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 WDR34Q96EX3 536 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 FOXJ2Q9P0K8 574 aa9.78□□□□□ -0.84
PTPN4-201ENST00000263708 COL11A1P12107 1806 aaPredicted RBP9.77□□□□□ -0.84
PTPN4-201ENST00000263708 UPK3AO75631 287 aa9.77□□□□□ -0.84
PTPN4-201ENST00000263708 LDLRAD2Q5SZI1 272 aa9.77□□□□□ -0.84
PTPN4-201ENST00000263708 REPIN1Q9BWE0 567 aaKnown RBP9.77□□□□□ -0.84
PTPN4-201ENST00000263708 PEMTQ9UBM1 199 aa9.77□□□□□ -0.84
PTPN4-201ENST00000263708 TRGV4A0A0C4DH28 118 aa9.77□□□□□ -0.84
PTPN4-201ENST00000263708 LNP1A1A4G5 178 aa9.77□□□□□ -0.84
PTPN4-201ENST00000263708 PRR33A8MZF0 331 aa9.77□□□□□ -0.85
PTPN4-201ENST00000263708 ICAM4Q14773 271 aa9.77□□□□□ -0.85
PTPN4-201ENST00000263708 C8orf88P0DMB2 117 aa9.77□□□□□ -0.85
PTPN4-201ENST00000263708 AGAP20933 346 aa9.77□□□□□ -0.85
PTPN4-201ENST00000263708 ZNF385AQ96PM9 386 aaKnown RBP9.77□□□□□ -0.85
PTPN4-201ENST00000263708 STRCQ7RTU9 1775 aa9.77□□□□□ -0.85
PTPN4-201ENST00000263708 SIGLEC14Q08ET2 396 aa9.77□□□□□ -0.85
PTPN4-201ENST00000263708 ZDBF2Q9HCK1 2354 aa9.77□□□□□ -0.85
PTPN4-201ENST00000263708 NDUFA2O43678 99 aa9.77□□□□□ -0.85
PTPN4-201ENST00000263708 NEUROG1Q92886 237 aa9.77□□□□□ -0.85
PTPN4-201ENST00000263708 GPHA2Q96T91 129 aa9.77□□□□□ -0.85
PTPN4-201ENST00000263708 CBLN4Q9NTU7 201 aa9.77□□□□□ -0.85
PTPN4-201ENST00000263708 GGTLC3B5MD39 225 aa9.77□□□□□ -0.85
PTPN4-201ENST00000263708 HOXD3P31249 432 aaPredicted RBP9.77□□□□□ -0.85
PTPN4-201ENST00000263708 SRSF6Q13247 344 aaKnown RBP9.77□□□□□ -0.85
PTPN4-201ENST00000263708 P2RY6Q15077 328 aa9.77□□□□□ -0.85
PTPN4-201ENST00000263708 FAM214BQ7L5A3 538 aa9.77□□□□□ -0.85
PTPN4-201ENST00000263708 LINC01560Q8TB33 94 aa9.77□□□□□ -0.85
PTPN4-201ENST00000263708 LRTM2Q8N967 370 aa9.77□□□□□ -0.85
PTPN4-201ENST00000263708 ST6GALNAC6Q969X2 333 aa9.77□□□□□ -0.85
PTPN4-201ENST00000263708 THADAQ6YHU6 1953 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 A0A1W2PP11 408 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 MARCH11A6NNE9 402 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 FGF12P61328 243 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 KCNK7Q9Y2U2 307 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 HIST1H4AP62805 103 aaKnown RBP9.76□□□□□ -0.85
PTPN4-201ENST00000263708 UNC119Q13432 240 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 RNF182Q8N6D2 247 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 ZNF48Q96MX3 618 aaPredicted RBP9.76□□□□□ -0.85
PTPN4-201ENST00000263708 CD7P09564 240 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 ZNF562Q6V9R5 426 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 STPG2Q8N412 459 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 DOCK6Q96HP0 2047 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 IGLV3-25P01717 112 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 C3orf36Q3SXR2 165 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 DNM1P46Q6ZS02 220 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 FOXA2Q9Y261 457 aaPredicted RBP9.76□□□□□ -0.85
PTPN4-201ENST00000263708 IGHV3OR16-8A0A075B7F1 116 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 SUMO4Q6EEV6 95 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 HOGA1Q86XE5 327 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 OR4D11Q8NGI4 311 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 TRAV8-4A0A0B4J246 113 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 FAM168AQ92567 244 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 AHRRA9YTQ3 701 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 LEPP41159 167 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 SRSF4Q08170 494 aaKnown RBP9.76□□□□□ -0.85
PTPN4-201ENST00000263708 CENPWQ5EE01 88 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 DMKNQ6E0U4 476 aaPredicted RBP9.76□□□□□ -0.85
PTPN4-201ENST00000263708 CLEC19AQ6UXS0 136 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 ZNF107Q9UII5 783 aaPredicted RBP9.76□□□□□ -0.85
PTPN4-201ENST00000263708 GPR183P32249 361 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 NPC2P61916 151 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 VCX2Q9H322 139 aa9.76□□□□□ -0.85
PTPN4-201ENST00000263708 A0A0G2JLM5 398 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 ODAMA1E959 279 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 OGG1O15527 345 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 GFRA3O60609 400 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 VSIG8P0DPA2 414 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 SDHCQ99643 169 aaPredicted RBP9.75□□□□□ -0.85
PTPN4-201ENST00000263708 EDIL3O43854 480 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 PSG4Q00888 419 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 ASCL4Q6XD76 172 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 IGHV3-64A0A075B6Q5 118 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 F8WEM9 126 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 GFI1BQ5VTD9 330 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 XAF1Q6GPH4 301 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 C9orf40Q8IXQ3 194 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 OR11H4Q8NGC9 324 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 TAF15Q92804 592 aaKnown RBP eCLIP9.75□□□□□ -0.85
PTPN4-201ENST00000263708 APOHP02749 345 aaPredicted RBP9.75□□□□□ -0.85
PTPN4-201ENST00000263708 WDR54Q9H977 334 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 IGKV1D-33P01593 117 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 IGKV1-33P01594 117 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 GATD1Q8NB37 220 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms