RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 EAF1Q96JC9 268 aaPredicted RBP11.7□□□□□ -0.54
CDH1-201ENST00000261769 TXNDC17Q9BRA2 123 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 C19orf24Q9BVV8 132 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 DNAJC4Q9NNZ3 241 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 CRIM1Q9NZV1 1036 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 FBLN5Q9UBX5 448 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 ACACBO00763 2458 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 DEDDO75618 318 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 IGFBP3P17936 291 aaPredicted RBP11.7□□□□□ -0.54
CDH1-201ENST00000261769 SUMO1P63165 101 aaKnown RBP11.7□□□□□ -0.54
CDH1-201ENST00000261769 FAM74A3Q4VXF1 159 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 FAM209BQ5JX69 171 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 H1FOOQ8IZA3 346 aaPredicted RBP11.7□□□□□ -0.54
CDH1-201ENST00000261769 OR10G8Q8NGN5 311 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 FAM216AQ8WUB2 273 aa11.7□□□□□ -0.54
CDH1-201ENST00000261769 PTBP3O95758 552 aaKnown RBP11.69□□□□□ -0.54
CDH1-201ENST00000261769 BATFQ16520 125 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 LRP11Q86VZ4 500 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 REG1AP05451 166 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 LGALSLQ3ZCW2 172 aaPredicted RBP11.69□□□□□ -0.54
CDH1-201ENST00000261769 OR4B1Q8NGF8 309 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 PRSS3P2Q8NHM4 247 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 NEURL2Q9BR09 285 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 MRPL20Q9BYC9 149 aaKnown RBP11.69□□□□□ -0.54
CDH1-201ENST00000261769 C5orf66Q9H5L9 145 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 FBXL7Q9UJT9 491 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 TECTAO75443 2155 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 NBR2O15453 112 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 NHLH2Q02577 135 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 VKORC1L1Q8N0U8 176 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 OR5AU1Q8NGC0 362 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 SMIM8Q96KF7 97 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 GPHA2Q96T91 129 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 SLC25A33Q9BSK2 321 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 NDUFS8O00217 210 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 VDAC2P45880 294 aaPredicted RBP11.69□□□□□ -0.54
CDH1-201ENST00000261769 PSG9Q00887 426 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 SMAGPQ0VAQ4 97 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 OR51G1Q8NGK1 321 aa11.69□□□□□ -0.54
CDH1-201ENST00000261769 ELOA3CA0A087WX78 387 aaPredicted RBP11.68□□□□□ -0.54
CDH1-201ENST00000261769 TRAV40A0A0B4J280 105 aa11.68□□□□□ -0.54
CDH1-201ENST00000261769 MFSD2BA6NFX1 497 aa11.68□□□□□ -0.54
CDH1-201ENST00000261769 HKR1P10072 659 aa11.68□□□□□ -0.54
CDH1-201ENST00000261769 NUTF2P61970 127 aaKnown RBP11.68□□□□□ -0.54
CDH1-201ENST00000261769 MRPL30Q8TCC3 161 aaKnown RBP11.68□□□□□ -0.54
CDH1-201ENST00000261769 TUBA4BQ9H853 241 aa11.68□□□□□ -0.54
CDH1-201ENST00000261769 OR10S1Q8NGN2 331 aa11.68□□□□□ -0.54
CDH1-201ENST00000261769 ELF5Q9UKW6 265 aaPredicted RBP11.68□□□□□ -0.54
CDH1-201ENST00000261769 WDR81Q562E7 1941 aa11.68□□□□□ -0.54
CDH1-201ENST00000261769 LOC102723971A0A1B0GUV8 181 aa11.68□□□□□ -0.54
CDH1-201ENST00000261769 SRSF10O75494 262 aaKnown RBP11.68□□□□□ -0.54
CDH1-201ENST00000261769 RND3P61587 244 aa11.68□□□□□ -0.54
CDH1-201ENST00000261769 OR11H7Q8NGC8 314 aa11.68□□□□□ -0.54
CDH1-201ENST00000261769 NPIPB3Q92617 1050 aa11.68□□□□□ -0.54
CDH1-201ENST00000261769 LYZL4Q96KX0 146 aa11.68□□□□□ -0.54
CDH1-201ENST00000261769 PRO3102Q9H379 93 aa11.68□□□□□ -0.54
CDH1-201ENST00000261769 DPRXA6NFQ7 191 aa11.68□□□□□ -0.54
CDH1-201ENST00000261769 TMEM178BH3BS89 294 aa11.68□□□□□ -0.54
CDH1-201ENST00000261769 TAF15Q92804 592 aaKnown RBP eCLIP11.68□□□□□ -0.54
CDH1-201ENST00000261769 SOSTQ9BQB4 213 aa11.68□□□□□ -0.54
CDH1-201ENST00000261769 LYRM2Q9NU23 88 aaPredicted RBP11.68□□□□□ -0.54
CDH1-201ENST00000261769 TRAPPC1Q9Y5R8 145 aa11.68□□□□□ -0.54
CDH1-201ENST00000261769 RGS13O14921 159 aa11.67□□□□□ -0.54
CDH1-201ENST00000261769 SNCGO76070 127 aa11.67□□□□□ -0.54
CDH1-201ENST00000261769 CAMPP49913 170 aa11.67□□□□□ -0.54
CDH1-201ENST00000261769 PLPPR1Q8TBJ4 325 aa11.67□□□□□ -0.54
CDH1-201ENST00000261769 C21orf62Q9NYP8 219 aa11.67□□□□□ -0.54
CDH1-201ENST00000261769 NOTCH4Q99466 2003 aa11.67□□□□□ -0.54
CDH1-201ENST00000261769 DLX6P56179 175 aa11.67□□□□□ -0.54
CDH1-201ENST00000261769 TMEM187Q14656 261 aa11.67□□□□□ -0.54
CDH1-201ENST00000261769 WDR25Q64LD2 544 aaPredicted RBP11.67□□□□□ -0.54
CDH1-201ENST00000261769 GBGT1Q8N5D6 347 aa11.67□□□□□ -0.54
CDH1-201ENST00000261769 MAS1LP35410 378 aa11.67□□□□□ -0.54
CDH1-201ENST00000261769 DLK1P80370 383 aa11.67□□□□□ -0.54
CDH1-201ENST00000261769 SPANXN1Q5VSR9 72 aa11.67□□□□□ -0.54
CDH1-201ENST00000261769 OR4A47Q6IF82 309 aa11.67□□□□□ -0.54
CDH1-201ENST00000261769 HEATR1Q9H583 2144 aaKnown RBP11.67□□□□□ -0.54
CDH1-201ENST00000261769 PLXNA4Q9HCM2 1894 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 OOSP1A8MZH6 123 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 RPS11P62280 158 aaKnown RBP eCLIP11.66□□□□□ -0.54
CDH1-201ENST00000261769 SLC25A28Q96A46 364 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 ST6GAL2Q96JF0 529 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 PEMTQ9UBM1 199 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 CUL9Q8IWT3 2517 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 TRAV20A0A0B4J274 112 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 C8orf88P0DMB2 117 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 C8orf46Q8TAG6 207 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 NOTCH2Q04721 2471 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 IGKV1-9A0A0C4DH69 117 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 SPINK4O60575 86 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 WNT2P09544 360 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 TDGF1P13385 188 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 AANATQ16613 207 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 GATAD1Q8WUU5 269 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 TMEM18Q96B42 140 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 IL36RNQ9UBH0 155 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 ZNF407Q9C0G0 2248 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 AP4M1O00189 453 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 IL4P05112 153 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 AMTP48728 403 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms