RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 RAB5BP61020 215 aa15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 ERVK-16P61578 105 aa15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 VWC2Q2TAL6 325 aa15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 OR10G4Q8NGN3 311 aa15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 OR10G9Q8NGN4 311 aa15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 OR10G7Q8NGN6 311 aa15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 C12orf57Q99622 126 aa15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 FLNCQ14315 2725 aa15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 RRHO14718 337 aa15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 RBFOX2O43251 390 aaKnown RBP eCLIP15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 IRF2P14316 349 aa15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 GNB2P62879 340 aa15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 AARDQ4LEZ3 155 aa15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 ZNF383Q8NA42 475 aa15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 GATAD1Q8WUU5 269 aa15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 HIVEP3Q5T1R4 2406 aa15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 IFNA10P01566 189 aa15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 CHRNB4P30926 498 aa15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 RAB7AP51149 207 aa15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 SNRPEP62304 92 aaKnown RBP15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 RNF212Q495C1 297 aa15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 ZNF439Q8NDP4 499 aa15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 URGCP-MRPS24S4R325 110 aa15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 HCFC1P51610 2035 aa15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 PRB1P04280 392 aa15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 NDUFB7P17568 137 aa15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 AGAP20933 346 aa15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 MDKP21741 143 aaPredicted RBP15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 SPCS3P61009 180 aa15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 MRPS11P82912 194 aaKnown RBP15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 GCSAMLQ5JQS6 135 aa15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 ZNF600Q6ZNG1 722 aa15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 ABHD12Q8N2K0 398 aa15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 HEYLQ9NQ87 328 aaPredicted RBP15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 DYSFO75923 2080 aa15.36■□□□□ 0.05
PDLIM4-201ENST00000253754 C17orf100A8MU93 164 aa15.35■□□□□ 0.05
PDLIM4-201ENST00000253754 MYOD1P15172 320 aa15.35■□□□□ 0.05
PDLIM4-201ENST00000253754 VDAC2P45880 294 aaPredicted RBP15.35■□□□□ 0.05
PDLIM4-201ENST00000253754 ADORA2A-AS1P86434 159 aa15.35■□□□□ 0.05
PDLIM4-201ENST00000253754 TEX36Q5VZQ5 186 aa15.35■□□□□ 0.05
PDLIM4-201ENST00000253754 Q8N7P7 452 aa15.35■□□□□ 0.05
PDLIM4-201ENST00000253754 OR4S2Q8NH73 311 aa15.35■□□□□ 0.05
PDLIM4-201ENST00000253754 TMEM170AQ8WVE7 144 aa15.35■□□□□ 0.05
PDLIM4-201ENST00000253754 NCOR1P1Q9H4R4 102 aa15.35■□□□□ 0.05
PDLIM4-201ENST00000253754 IDI2-AS1Q9NZ38 188 aa15.35■□□□□ 0.05
PDLIM4-201ENST00000253754 VAX2Q9UIW0 290 aa15.35■□□□□ 0.05
PDLIM4-201ENST00000253754 SPTBN1Q01082 2364 aaKnown RBP15.35■□□□□ 0.05
PDLIM4-201ENST00000253754 DSCAML1Q8TD84 2053 aa15.35■□□□□ 0.05
PDLIM4-201ENST00000253754 ZNF462Q96JM2 2506 aa15.35■□□□□ 0.05
PDLIM4-201ENST00000253754 SMCO3A2RU48 225 aa15.34■□□□□ 0.05
PDLIM4-201ENST00000253754 FCN3O75636 299 aa15.34■□□□□ 0.05
PDLIM4-201ENST00000253754 SLC35E3Q7Z769 313 aa15.34■□□□□ 0.05
PDLIM4-201ENST00000253754 FAM216AQ8WUB2 273 aa15.34■□□□□ 0.05
PDLIM4-201ENST00000253754 RALYQ9UKM9 306 aaKnown RBP15.34■□□□□ 0.05
PDLIM4-201ENST00000253754 PKDREJQ9NTG1 2253 aa15.34■□□□□ 0.05
PDLIM4-201ENST00000253754 FAM90A9PA6NNJ1 464 aa15.34■□□□□ 0.05
PDLIM4-201ENST00000253754 CD1BP29016 333 aa15.34■□□□□ 0.05
PDLIM4-201ENST00000253754 CD81P60033 236 aa15.34■□□□□ 0.05
PDLIM4-201ENST00000253754 ZNF709Q8N972 641 aa15.34■□□□□ 0.05
PDLIM4-201ENST00000253754 RHOVQ96L33 236 aa15.34■□□□□ 0.05
PDLIM4-201ENST00000253754 CTXND1A0A1B0GTU2 59 aa15.33■□□□□ 0.05
PDLIM4-201ENST00000253754 ITGB1BP1O14713 200 aa15.33■□□□□ 0.05
PDLIM4-201ENST00000253754 CDSNQ15517 529 aa15.33■□□□□ 0.05
PDLIM4-201ENST00000253754 OR4A47Q6IF82 309 aa15.33■□□□□ 0.05
PDLIM4-201ENST00000253754 RAB24Q969Q5 203 aa15.33■□□□□ 0.05
PDLIM4-201ENST00000253754 TCF19Q9Y242 345 aa15.33■□□□□ 0.05
PDLIM4-201ENST00000253754 ANKHD1Q8IWZ3 2542 aaKnown RBP15.33■□□□□ 0.05
PDLIM4-201ENST00000253754 GRNP28799 593 aaKnown RBP15.33■□□□□ 0.04
PDLIM4-201ENST00000253754 KIR2DS2P43631 304 aa15.33■□□□□ 0.04
PDLIM4-201ENST00000253754 HEPN1Q6WQI6 88 aa15.33■□□□□ 0.04
PDLIM4-201ENST00000253754 SSX8Q7RTT4 187 aa15.33■□□□□ 0.04
PDLIM4-201ENST00000253754 Q8WTZ3 238 aa15.33■□□□□ 0.04
PDLIM4-201ENST00000253754 NEUROG1Q92886 237 aa15.33■□□□□ 0.04
PDLIM4-201ENST00000253754 BBC3Q96PG8 261 aaPredicted RBP15.33■□□□□ 0.04
PDLIM4-201ENST00000253754 MYO18BQ8IUG5 2567 aa15.33■□□□□ 0.04
PDLIM4-201ENST00000253754 ZNF729A6NN14 1252 aaPredicted RBP15.32■□□□□ 0.04
PDLIM4-201ENST00000253754 CXCL1P09341 107 aa15.32■□□□□ 0.04
PDLIM4-201ENST00000253754 TNFRSF1AP19438 455 aa15.32■□□□□ 0.04
PDLIM4-201ENST00000253754 SAP30LQ9HAJ7 183 aa15.32■□□□□ 0.04
PDLIM4-201ENST00000253754 GAB2Q9UQC2 676 aa15.32■□□□□ 0.04
PDLIM4-201ENST00000253754 WDR83OSQ9Y284 106 aa15.32■□□□□ 0.04
PDLIM4-201ENST00000253754 TET2Q6N021 2002 aaPredicted RBP15.32■□□□□ 0.04
PDLIM4-201ENST00000253754 TANC2Q9HCD6 1990 aa15.32■□□□□ 0.04
PDLIM4-201ENST00000253754 A0A087WWC5 75 aa15.32■□□□□ 0.04
PDLIM4-201ENST00000253754 IFNA1P01562 189 aa15.32■□□□□ 0.04
PDLIM4-201ENST00000253754 IGKV1-16P04430 117 aa15.32■□□□□ 0.04
PDLIM4-201ENST00000253754 OR52E5Q8NH55 327 aa15.32■□□□□ 0.04
PDLIM4-201ENST00000253754 CCL17Q92583 94 aa15.32■□□□□ 0.04
PDLIM4-201ENST00000253754 NGBQ9NPG2 151 aa15.32■□□□□ 0.04
PDLIM4-201ENST00000253754 SLC25A10Q9UBX3 287 aaPredicted RBP15.32■□□□□ 0.04
PDLIM4-201ENST00000253754 RPUSD1Q9UJJ7 312 aaKnown RBP15.32■□□□□ 0.04
PDLIM4-201ENST00000253754 TRAV38-1A0A0B4J264 116 aa15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 C15orf61A6NNL5 157 aa15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 PRSS46E5RG02 174 aa15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 MBP02144 154 aa15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 CCL3L1P16619 93 aa15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 THBS3P49746 956 aa15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 MEF2BQ02080 365 aaPredicted RBP15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 ELOBQ15370 118 aa15.31■□□□□ 0.04
PDLIM4-201ENST00000253754 ZNF674Q2M3X9 581 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms