RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 SP5Q6BEB4 398 aaPredicted RBP19■□□□□ 0.63
MSX2-201ENST00000239243 NEU4Q8WWR8 484 aaPredicted RBP19■□□□□ 0.63
MSX2-201ENST00000239243 MRPL20Q9BYC9 149 aaKnown RBP19■□□□□ 0.63
MSX2-201ENST00000239243 ZNF137PP52743 207 aa18.99■□□□□ 0.63
MSX2-201ENST00000239243 RAB11AP62491 216 aa18.99■□□□□ 0.63
MSX2-201ENST00000239243 OR5AN1Q8NGI8 311 aa18.99■□□□□ 0.63
MSX2-201ENST00000239243 GGACTQ9BVM4 153 aa18.99■□□□□ 0.63
MSX2-201ENST00000239243 ENY2Q9NPA8 101 aa18.99■□□□□ 0.63
MSX2-201ENST00000239243 ZNF257Q9Y2Q1 563 aa18.99■□□□□ 0.63
MSX2-201ENST00000239243 IL6RP08887 468 aaPredicted RBP18.98■□□□□ 0.63
MSX2-201ENST00000239243 FGF7P21781 194 aa18.98■□□□□ 0.63
MSX2-201ENST00000239243 IL3RAP26951 378 aa18.98■□□□□ 0.63
MSX2-201ENST00000239243 C11orf71Q6IPW1 123 aa18.98■□□□□ 0.63
MSX2-201ENST00000239243 TNFRSF14Q92956 283 aa18.98■□□□□ 0.63
MSX2-201ENST00000239243 FKBP11Q9NYL4 201 aa18.98■□□□□ 0.63
MSX2-201ENST00000239243 BET1LQ9NYM9 111 aa18.98■□□□□ 0.63
MSX2-201ENST00000239243 DOCK11Q5JSL3 2073 aa18.98■□□□□ 0.63
MSX2-201ENST00000239243 RBFOX3A6NFN3 312 aa18.98■□□□□ 0.63
MSX2-201ENST00000239243 MBP02144 154 aa18.98■□□□□ 0.63
MSX2-201ENST00000239243 IGKV1-16P04430 117 aa18.98■□□□□ 0.63
MSX2-201ENST00000239243 ZNF709Q8N972 641 aa18.98■□□□□ 0.63
MSX2-201ENST00000239243 TIMD4Q96H15 378 aa18.98■□□□□ 0.63
MSX2-201ENST00000239243 SLC35B3Q9H1N7 401 aa18.98■□□□□ 0.63
MSX2-201ENST00000239243 TMEM133Q9H2Q1 129 aa18.98■□□□□ 0.63
MSX2-201ENST00000239243 MIOXQ9UGB7 285 aa18.98■□□□□ 0.63
MSX2-201ENST00000239243 C17orf112F2Z3M2 114 aa18.97■□□□□ 0.63
MSX2-201ENST00000239243 H0YJW9 148 aa18.97■□□□□ 0.63
MSX2-201ENST00000239243 H7C2Y5 167 aa18.97■□□□□ 0.63
MSX2-201ENST00000239243 ZNF841Q6ZN19 808 aa18.97■□□□□ 0.63
MSX2-201ENST00000239243 OR8B3Q8NGG8 313 aa18.97■□□□□ 0.63
MSX2-201ENST00000239243 MBD3L1Q8WWY6 194 aa18.97■□□□□ 0.63
MSX2-201ENST00000239243 RAB1CQ92928 201 aa18.97■□□□□ 0.63
MSX2-201ENST00000239243 OR8B2Q96RD0 313 aa18.97■□□□□ 0.63
MSX2-201ENST00000239243 UPK2O00526 184 aa18.97■□□□□ 0.63
MSX2-201ENST00000239243 RBP4P02753 201 aa18.97■□□□□ 0.63
MSX2-201ENST00000239243 ABHD12Q8N2K0 398 aa18.97■□□□□ 0.63
MSX2-201ENST00000239243 PCGF1Q9BSM1 259 aa18.97■□□□□ 0.63
MSX2-201ENST00000239243 OR51B2Q9Y5P1 312 aa18.97■□□□□ 0.63
MSX2-201ENST00000239243 COL6A6A6NMZ7 2263 aa18.96■□□□□ 0.63
MSX2-201ENST00000239243 SOX15O60248 233 aa18.96■□□□□ 0.63
MSX2-201ENST00000239243 CCL20P78556 96 aa18.96■□□□□ 0.63
MSX2-201ENST00000239243 TMEM177Q53S58 311 aa18.96■□□□□ 0.63
MSX2-201ENST00000239243 ETV3LQ6ZN32 361 aa18.96■□□□□ 0.63
MSX2-201ENST00000239243 PDPNQ86YL7 162 aa18.96■□□□□ 0.63
MSX2-201ENST00000239243 CACNA1AO00555 2505 aa18.96■□□□□ 0.63
MSX2-201ENST00000239243 NBASA2RRP1 2371 aa18.96■□□□□ 0.63
MSX2-201ENST00000239243 DNASE2O00115 360 aaPredicted RBP18.96■□□□□ 0.63
MSX2-201ENST00000239243 CD1BP29016 333 aa18.96■□□□□ 0.63
MSX2-201ENST00000239243 DTX2Q86UW9 622 aa18.96■□□□□ 0.63
MSX2-201ENST00000239243 ST6GALNAC6Q969X2 333 aa18.96■□□□□ 0.63
MSX2-201ENST00000239243 NEIL1Q96FI4 390 aaPredicted RBP18.96■□□□□ 0.63
MSX2-201ENST00000239243 HARBI1Q96MB7 349 aa18.96■□□□□ 0.63
MSX2-201ENST00000239243 KBTBD11O94819 623 aa18.95■□□□□ 0.62
MSX2-201ENST00000239243 MDKP21741 143 aaPredicted RBP18.95■□□□□ 0.62
MSX2-201ENST00000239243 RAB13P51153 203 aa18.95■□□□□ 0.62
MSX2-201ENST00000239243 RPS16P62249 146 aaKnown RBP18.95■□□□□ 0.62
MSX2-201ENST00000239243 C11orf42Q8N5U0 333 aa18.95■□□□□ 0.62
MSX2-201ENST00000239243 OR4C13Q8NGP0 309 aa18.95■□□□□ 0.62
MSX2-201ENST00000239243 FLYWCH2Q96CP2 140 aaKnown RBP18.95■□□□□ 0.62
MSX2-201ENST00000239243 NABP2Q9BQ15 211 aa18.95■□□□□ 0.62
MSX2-201ENST00000239243 NPCDR1Q9BY65 106 aa18.95■□□□□ 0.62
MSX2-201ENST00000239243 VSIRQ9H7M9 311 aa18.95■□□□□ 0.62
MSX2-201ENST00000239243 UNKLQ9H9P5 680 aaKnown RBP18.95■□□□□ 0.62
MSX2-201ENST00000239243 KALRNO60229 2985 aa18.95■□□□□ 0.62
MSX2-201ENST00000239243 MPDU1O75352 247 aa18.94■□□□□ 0.62
MSX2-201ENST00000239243 ELLP55199 621 aaPredicted RBP18.94■□□□□ 0.62
MSX2-201ENST00000239243 AVPI1Q5T686 147 aa18.94■□□□□ 0.62
MSX2-201ENST00000239243 TGIF2LXQ8IUE1 241 aa18.94■□□□□ 0.62
MSX2-201ENST00000239243 C8orf46Q8TAG6 207 aa18.94■□□□□ 0.62
MSX2-201ENST00000239243 ITLN2Q8WWU7 325 aaPredicted RBP18.94■□□□□ 0.62
MSX2-201ENST00000239243 LHX4Q969G2 390 aa18.94■□□□□ 0.62
MSX2-201ENST00000239243 RCC1LQ96I51 464 aaKnown RBP18.94■□□□□ 0.62
MSX2-201ENST00000239243 DLK1P80370 383 aa18.94■□□□□ 0.62
MSX2-201ENST00000239243 ZNF787Q6DD87 383 aa18.94■□□□□ 0.62
MSX2-201ENST00000239243 SLC24A4Q8NFF2 622 aa18.94■□□□□ 0.62
MSX2-201ENST00000239243 OR5B3Q8NH48 314 aa18.94■□□□□ 0.62
MSX2-201ENST00000239243 WDR83OSQ9Y284 106 aa18.94■□□□□ 0.62
MSX2-201ENST00000239243 hCG_1809904A0A1W2PP81 198 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 A0A1W2PPE2 198 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 A0A1W2PR64 198 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 A0A1W2PRV1 198 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 SRRM4A7MD48 611 aaKnown RBP18.93■□□□□ 0.62
MSX2-201ENST00000239243 F12P00748 615 aaPredicted RBP18.93■□□□□ 0.62
MSX2-201ENST00000239243 SOD3P08294 240 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 SAA1P0DJI8 122 aaPredicted RBP18.93■□□□□ 0.62
MSX2-201ENST00000239243 MC5RP33032 325 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 PRRX1P54821 245 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 PRCDQ00LT1 54 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 VSTM2AQ8TAG5 236 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 PLEKHA3Q9HB20 300 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 WASHC3Q9Y3C0 194 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 RRHO14718 337 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 TSPAN4O14817 238 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 IFNA4P05014 189 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 GNLYP22749 145 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 NPY1RP25929 384 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 ZNF506Q5JVG8 444 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 CLRN3Q8NCR9 226 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 CLDND2Q8NHS1 167 aa18.93■□□□□ 0.62
MSX2-201ENST00000239243 TET2Q6N021 2002 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms