RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PARLQ9H300 379 aa11.27□□□□□ -0.61
COL1A1-201ENST00000225964 A0A0G2JLM5 398 aa11.27□□□□□ -0.61
COL1A1-201ENST00000225964 TRBV5-5A0A0J9YX44 114 aa11.27□□□□□ -0.61
COL1A1-201ENST00000225964 M0R381 172 aa11.27□□□□□ -0.61
COL1A1-201ENST00000225964 CACNA1CQ13936 2221 aa11.27□□□□□ -0.61
COL1A1-201ENST00000225964 RFPL3SP0C7P2 107 aa11.27□□□□□ -0.61
COL1A1-201ENST00000225964 GPR183P32249 361 aa11.27□□□□□ -0.61
COL1A1-201ENST00000225964 ARPC1AQ92747 370 aa11.27□□□□□ -0.61
COL1A1-201ENST00000225964 TUBGCP6Q96RT7 1819 aa11.27□□□□□ -0.61
COL1A1-201ENST00000225964 TRGV2A0A075B6R0 118 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 PLA2G10O15496 165 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 RPS11P62280 158 aaKnown RBP eCLIP11.26□□□□□ -0.61
COL1A1-201ENST00000225964 ACP7Q6ZNF0 438 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 CLDND2Q8NHS1 167 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 ZNF815PA8K554 130 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 ICAM4Q14773 271 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 C11orf91Q3C1V1 193 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 SPSB4Q96A44 273 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 NABP2Q9BQ15 211 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 TCF21O43680 179 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 P2RY4P51582 365 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 RARRES2Q99969 163 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 C4orf51C9J302 202 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 IGHMP01871 453 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 MT-ND6P03923 174 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 MALP21145 153 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 TMEM70Q9BUB7 260 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 SH3BGRL3Q9H299 93 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 NPIPB8E9PQR5 432 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 LINC00470Q9BZP3 86 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 TOMM7Q9P0U1 55 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 SEMA5BQ9P283 1151 aa11.26□□□□□ -0.61
COL1A1-201ENST00000225964 RBBP6Q7Z6E9 1792 aaKnown RBP11.25□□□□□ -0.61
COL1A1-201ENST00000225964 OTOFQ9HC10 1997 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 IGHV3-11P01762 117 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 PRB3Q04118 309 aaPredicted RBP11.25□□□□□ -0.61
COL1A1-201ENST00000225964 CD300CQ08708 224 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 ZNF79Q15937 498 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 TMEM170BQ5T4T1 132 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 TMEM160Q9NX00 188 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 HLA-DQA1P01909 254 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 TMEM136Q6ZRR5 245 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 OR10AG1Q8NH19 301 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 ZNF703Q9H7S9 590 aaPredicted RBP11.25□□□□□ -0.61
COL1A1-201ENST00000225964 H7C1H1 209 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 MEF2BQ02080 365 aaPredicted RBP11.25□□□□□ -0.61
COL1A1-201ENST00000225964 CFAP161Q6P656 301 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 DRAM1Q8N682 238 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 TEX45Q8NA69 505 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 ELF5Q9UKW6 265 aaPredicted RBP11.25□□□□□ -0.61
COL1A1-201ENST00000225964 FAM90A26D6RGX4 464 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 ERASQ7Z444 233 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 RTN4RL2Q86UN3 420 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 FOXC2Q99958 501 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 SCN4AP35499 1836 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 CECR9P0C854 216 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 DPM3Q9P2X0 92 aa11.25□□□□□ -0.61
COL1A1-201ENST00000225964 CXCL2P19875 107 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 COTL1Q14019 142 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 RIPPLY2Q5TAB7 128 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 WDR82Q6UXN9 313 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 GPR132Q9UNW8 380 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 LY75O60449 1722 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 GAGE10A6NGK3 116 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 C1QL1O75973 258 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 GLRXP35754 106 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 Q96M66 194 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 JMJD8Q96S16 334 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 REPIN1Q9BWE0 567 aaKnown RBP11.24□□□□□ -0.61
COL1A1-201ENST00000225964 ZNF646O15015 1829 aaPredicted RBP11.24□□□□□ -0.61
COL1A1-201ENST00000225964 CCDC88CQ9P219 2028 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 IGHV3OR16-8A0A075B7F1 116 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 SRIP30626 198 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 LY6DQ14210 128 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 DMRTA2Q96SC8 542 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 NRIP2Q9BQI9 281 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 G6PC2Q9NQR9 355 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 TGIF2-C20orf24A0A0A6YYL0 155 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 EFEMP2O95967 443 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 OR10S1Q8NGN2 331 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 ZFC3H1O60293 1989 aaKnown RBP11.24□□□□□ -0.61
COL1A1-201ENST00000225964 TCRBV4S1A1TA0A5B7 111 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 KCNE5Q9UJ90 142 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 TRGC2P03986 189 aa11.24□□□□□ -0.61
COL1A1-201ENST00000225964 TSPAN13O95857 204 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 UBE2DNLQ8IWF7 75 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 COL11A2P13942 1736 aaPredicted RBP11.23□□□□□ -0.61
COL1A1-201ENST00000225964 KIAA1644Q3SXP7 199 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 BIVMQ86UB2 503 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 SPSB2Q99619 263 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 SDF2L1Q9HCN8 221 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 ASCC3Q8N3C0 2202 aaKnown RBP11.23□□□□□ -0.61
COL1A1-201ENST00000225964 NRN1LQ496H8 165 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 PAPPA-AS1Q5QFB9 102 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 A0A0G2JMM0 328 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 A0A1W2PPB8 328 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 A0A1W2PRS3 328 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 KIR3DP1A8MWS1 328 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 LDLRAD2Q5SZI1 272 aa11.23□□□□□ -0.61
COL1A1-201ENST00000225964 TXNDC17Q9BRA2 123 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 186.3 ms