RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 SUMO1P63165 101 aaKnown RBP10.33□□□□□ -0.76
TM9SF4-201ENST00000217315 ARL16Q0P5N6 197 aa10.33□□□□□ -0.76
TM9SF4-201ENST00000217315 WDR86Q86TI4 376 aa10.33□□□□□ -0.76
TM9SF4-201ENST00000217315 VSTM2AQ8TAG5 236 aa10.33□□□□□ -0.76
TM9SF4-201ENST00000217315 BLNKQ8WV28 456 aa10.33□□□□□ -0.76
TM9SF4-201ENST00000217315 RPEQ96AT9 228 aa10.33□□□□□ -0.76
TM9SF4-201ENST00000217315 METTL1Q9UBP6 276 aaKnown RBP10.33□□□□□ -0.76
TM9SF4-201ENST00000217315 NAT8BQ9UHF3 227 aa10.33□□□□□ -0.76
TM9SF4-201ENST00000217315 PITPNC1Q9UKF7 332 aa10.33□□□□□ -0.76
TM9SF4-201ENST00000217315 ELOA3CA0A087WX78 387 aaPredicted RBP10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 A0A1W2PRD5 423 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 A0A1W2PRF3 423 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 A0A1W2PRM7 423 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 ZNF585BQ52M93 769 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 ZNF383Q8NA42 475 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 OR1L8Q8NGR8 309 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 COQ2Q96H96 371 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 MS4A5Q9H3V2 200 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 CLN5O75503 358 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 CD3EP07766 207 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 TNXAQ16473 311 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 ZNF705AQ6ZN79 300 aaPredicted RBP10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 STARD4Q96DR4 205 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 ZNF714Q96N38 554 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 ZNF355PQ9NSJ1 428 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 IDI2-AS1Q9NZ38 188 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 TMEM250H0YL14 139 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 MORN2Q502X0 79 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 Q6ZSR3 168 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 TMEM167BQ9NRX6 74 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 ONECUT1Q9UBC0 465 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 HSPB7Q9UBY9 170 aa10.32□□□□□ -0.76
TM9SF4-201ENST00000217315 CREBBPQ92793 2442 aa10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 IGHV3-21A0A0B4J1V1 117 aa10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 RPP25LQ8N5L8 163 aaKnown RBP10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 SFXN3Q9BWM7 321 aa10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 CD40P25942 277 aa10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 CHRNB4P30926 498 aa10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 DBX2Q6ZNG2 339 aa10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 KDF1Q8NAX2 398 aaPredicted RBP10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 OR51G1Q8NGK1 321 aa10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 TIMM9Q9Y5J7 89 aa10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.31□□□□□ -0.763e-8■■□□□ 14.2
TM9SF4-201ENST00000217315 NUP210LQ5VU65 1888 aa10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 A0A1W2PNU3 283 aaPredicted RBP10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 HELTA6NFD8 242 aa10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 SCGB2A1O75556 95 aa10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 CDX1P47902 265 aaPredicted RBP10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 GCSAMLQ5JQS6 135 aa10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 SPSB3Q6PJ21 355 aa10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 CRIP3Q6Q6R5 217 aa10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 SDF2L1Q9HCN8 221 aa10.31□□□□□ -0.76
TM9SF4-201ENST00000217315 ACAA1P09110 424 aaPredicted RBP10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 OR9G9P0C7N8 305 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 DUTP33316 252 aaKnown RBP10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 PAX9P55771 341 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 CD177Q8N6Q3 437 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 OR5B3Q8NH48 314 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 MRPL37Q9BZE1 423 aaKnown RBP10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 PLSCR4Q9NRQ2 329 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 SLC35B1P78383 322 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 CYP2G1PQ6ZSU1 146 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 GATAD1Q8WUU5 269 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 IL19Q9UHD0 177 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 LINC00473A8K010 186 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 SRRM5B3KS81 715 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 PPIHO43447 177 aaKnown RBP10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 CA2P00918 260 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 RBP4P02753 201 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 OR4A47Q6IF82 309 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 WDR31Q8NA23 367 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 OR4X1Q8NH49 305 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 MS4A10Q96PG2 267 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 MBNL3Q9NUK0 354 aaKnown RBP10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 COA4Q9NYJ1 87 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 MALRD1Q5VYJ5 2156 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 KBTBD11-OT1A0A1B0GTJ5 212 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 A0A1W2PN81 502 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 PLAUP00749 431 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 ATP5G3P48201 142 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 RPL8P62917 257 aaKnown RBP10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 SIGLECL1Q8N7X8 197 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 INSIG2Q9Y5U4 225 aa10.3□□□□□ -0.76
TM9SF4-201ENST00000217315 IGKV1-39P01597 117 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 IGKV1D-39P04432 117 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 PLA2G2CQ5R387 149 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 OR1B1Q8NGR6 318 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 BORCS7Q96B45 105 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 A0A087WWC5 75 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 SLC25A17O43808 307 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 IGKV3-15P01624 115 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 IGHG3P01860 377 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 SLC25A5P05141 298 aaKnown RBP10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 CEACAM1P13688 526 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 KRTDAPP60985 99 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 ELOBQ15370 118 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 HCP5Q6MZN7 132 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 STPG3Q8N7X2 389 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 Q8NFD4 153 aa10.29□□□□□ -0.76
TM9SF4-201ENST00000217315 ABHD17AQ96GS6 310 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms