RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 PDCD6O75340 191 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 CDK2AP2O75956 126 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 GLAP06280 429 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 SAA2P0DJI9 122 aaPredicted RBP10.26□□□□□ -0.77
SNX1-214ENST00000625244 SERPINB10P48595 397 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 VBP1P61758 197 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 FXYD3Q14802 87 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 TMEM30BQ3MIR4 351 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 TM4SF20Q53R12 229 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 IDNKQ5T6J7 187 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 C5orf24Q7Z6I8 188 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 Q8N1X5 172 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 OR52L2PQ8NGH6 319 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 OR56B1Q8NGI3 324 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 TM2D1Q9BX74 207 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 MFFQ9GZY8 342 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 RAB9BQ9NP90 201 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 OR2S2Q9NQN1 319 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 PLEKHJ1Q9NW61 149 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 RCC2Q9P258 522 aaKnown RBP10.26□□□□□ -0.77
SNX1-214ENST00000625244 TRAPPC2LQ9UL33 140 aa10.26□□□□□ -0.77
SNX1-214ENST00000625244 CA11O75493 328 aa10.25□□□□□ -0.77
SNX1-214ENST00000625244 SCGNO76038 276 aa10.25□□□□□ -0.77
SNX1-214ENST00000625244 GABARAPO95166 117 aa10.25□□□□□ -0.77
SNX1-214ENST00000625244 GSTP1P09211 210 aaKnown RBP10.25□□□□□ -0.77
SNX1-214ENST00000625244 RAB6AP20340 208 aa10.25□□□□□ -0.77
SNX1-214ENST00000625244 PPP1CCP36873 323 aaKnown RBP10.25□□□□□ -0.77
SNX1-214ENST00000625244 SCAND1P57086 179 aa10.25□□□□□ -0.77
SNX1-214ENST00000625244 SSBP2P81877 361 aaPredicted RBP10.25□□□□□ -0.77
SNX1-214ENST00000625244 MRPS15P82914 257 aaKnown RBP10.25□□□□□ -0.77
SNX1-214ENST00000625244 UNC119Q13432 240 aa10.25□□□□□ -0.77
SNX1-214ENST00000625244 PSG5Q15238 335 aa10.25□□□□□ -0.77
SNX1-214ENST00000625244 LCE2DQ5TA82 110 aaPredicted RBP10.25□□□□□ -0.77
SNX1-214ENST00000625244 GLDNQ6ZMI3 551 aaPredicted RBP10.25□□□□□ -0.77
SNX1-214ENST00000625244 CLVS1Q8IUQ0 354 aaPredicted RBP10.25□□□□□ -0.77
SNX1-214ENST00000625244 OR4K15Q8NH41 348 aa10.25□□□□□ -0.77
SNX1-214ENST00000625244 CACNG8Q8WXS5 425 aa10.25□□□□□ -0.77
SNX1-214ENST00000625244 PTX4Q96A99 478 aa10.25□□□□□ -0.77
SNX1-214ENST00000625244 USMG5Q96IX5 58 aa10.25□□□□□ -0.77
SNX1-214ENST00000625244 KCNK15Q9H427 330 aa10.25□□□□□ -0.77
SNX1-214ENST00000625244 TMEM272A0A1B0GTI8 110 aa10.24□□□□□ -0.77
SNX1-214ENST00000625244 SCAF4O95104 1147 aaKnown RBP10.24□□□□□ -0.77
SNX1-214ENST00000625244 CLEC2LP0C7M8 214 aa10.24□□□□□ -0.77
SNX1-214ENST00000625244 CT45A6P0DMU7 189 aa10.24□□□□□ -0.77
SNX1-214ENST00000625244 CT45A5P0DMU8 189 aa10.24□□□□□ -0.77
SNX1-214ENST00000625244 CT45A7P0DMV0 189 aa10.24□□□□□ -0.77
SNX1-214ENST00000625244 RCC1P18754 421 aaPredicted RBP10.24□□□□□ -0.77
SNX1-214ENST00000625244 NCS1P62166 190 aa10.24□□□□□ -0.77
SNX1-214ENST00000625244 QRFPP83859 136 aa10.24□□□□□ -0.77
SNX1-214ENST00000625244 RAB2BQ8WUD1 216 aa10.24□□□□□ -0.77
SNX1-214ENST00000625244 BCL7BQ9BQE9 202 aa10.24□□□□□ -0.77
SNX1-214ENST00000625244 LPAR5Q9H1C0 372 aa10.24□□□□□ -0.77
SNX1-214ENST00000625244 ATG5Q9H1Y0 275 aa10.24□□□□□ -0.77
SNX1-214ENST00000625244 ETV7Q9Y603 341 aa10.24□□□□□ -0.77
SNX1-214ENST00000625244 UBE2QL1A1L167 161 aa10.23□□□□□ -0.77
SNX1-214ENST00000625244 CCDC160A6NGH7 325 aa10.23□□□□□ -0.77
SNX1-214ENST00000625244 H0YJW9 148 aa10.23□□□□□ -0.77
SNX1-214ENST00000625244 TGFBR1P36897 503 aa10.23□□□□□ -0.77
SNX1-214ENST00000625244 MFAP2P55001 183 aa10.23□□□□□ -0.77
SNX1-214ENST00000625244 ARL6IP1Q15041 203 aa10.23□□□□□ -0.77
SNX1-214ENST00000625244 TMEM177Q53S58 311 aa10.23□□□□□ -0.77
SNX1-214ENST00000625244 C6orf183Q5T699 404 aa10.23□□□□□ -0.77
SNX1-214ENST00000625244 ZNF57Q68EA5 555 aaPredicted RBP10.23□□□□□ -0.77
SNX1-214ENST00000625244 NR2C2APQ86WQ0 139 aa10.23□□□□□ -0.77
SNX1-214ENST00000625244 STPG3Q8N7X2 389 aa10.23□□□□□ -0.77
SNX1-214ENST00000625244 LGALS14Q8TCE9 139 aa10.23□□□□□ -0.77
SNX1-214ENST00000625244 AP3S1Q92572 193 aa10.23□□□□□ -0.77
SNX1-214ENST00000625244 SLC25A46Q96AG3 418 aa10.23□□□□□ -0.77
SNX1-214ENST00000625244 NICN1Q9BSH3 213 aa10.23□□□□□ -0.77
SNX1-214ENST00000625244 CHMP1AQ9HD42 196 aaPredicted RBP10.23□□□□□ -0.77
SNX1-214ENST00000625244 COA4Q9NYJ1 87 aa10.23□□□□□ -0.77
SNX1-214ENST00000625244 ABRACLQ9P1F3 81 aa10.23□□□□□ -0.77
SNX1-214ENST00000625244 MLXQ9UH92 298 aa10.23□□□□□ -0.77
SNX1-214ENST00000625244 H7C2Y5 167 aa10.22□□□□□ -0.77
SNX1-214ENST00000625244 CBLN1P23435 193 aa10.22□□□□□ -0.77
SNX1-214ENST00000625244 FCGR2BP31994 310 aaPredicted RBP10.22□□□□□ -0.77
SNX1-214ENST00000625244 RPS19P39019 145 aaKnown RBP10.22□□□□□ -0.77
SNX1-214ENST00000625244 RORCP51449 518 aa10.22□□□□□ -0.77
SNX1-214ENST00000625244 TMBIM6P55061 237 aa10.22□□□□□ -0.77
SNX1-214ENST00000625244 CTF1Q16619 201 aa10.22□□□□□ -0.77
SNX1-214ENST00000625244 RPL39P5Q59GN2 51 aa10.22□□□□□ -0.77
SNX1-214ENST00000625244 TRAT1Q6PIZ9 186 aa10.22□□□□□ -0.77
SNX1-214ENST00000625244 C6orf201Q7Z4U5 140 aa10.22□□□□□ -0.77
SNX1-214ENST00000625244 RAB3CQ96E17 227 aa10.22□□□□□ -0.77
SNX1-214ENST00000625244 NAA50Q9GZZ1 169 aaKnown RBP10.22□□□□□ -0.77
SNX1-214ENST00000625244 DCSTAMPQ9H295 470 aa10.22□□□□□ -0.77
SNX1-214ENST00000625244 IFI27L2Q9H2X8 130 aa10.22□□□□□ -0.77
SNX1-214ENST00000625244 TAF9BQ9HBM6 251 aa10.22□□□□□ -0.77
SNX1-214ENST00000625244 SCRT2Q9NQ03 307 aa10.22□□□□□ -0.77
SNX1-214ENST00000625244 KCNIP1Q9NZI2 227 aa10.22□□□□□ -0.77
SNX1-214ENST00000625244 ZNF230Q9UIE0 474 aaPredicted RBP10.22□□□□□ -0.77
SNX1-214ENST00000625244 HSF4Q9ULV5 492 aa10.22□□□□□ -0.77
SNX1-214ENST00000625244 KIR2DL5BA0A0G2JN68 375 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 KIR2DL5BA0A0G2JPC4 375 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 OR5H14A6NHG9 310 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 SOCS1O15524 211 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 RBBP9O75884 186 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 HLA-AP01891 365 aaKnown RBP10.21□□□□□ -0.77
SNX1-214ENST00000625244 LGALS7P47929 136 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 PJVKQ0ZLH3 352 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 218.2 ms