RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 FOXB1Q99853 325 aa10.17□□□□□ -0.78
SRRT-216ENST00000618262 MRPS16Q9Y3D3 137 aaKnown RBP10.17□□□□□ -0.78
SRRT-216ENST00000618262 ANKHD1Q8IWZ3 2542 aaKnown RBP10.17□□□□□ -0.78
SRRT-216ENST00000618262 NCOA6Q14686 2063 aaPredicted RBP10.17□□□□□ -0.78
SRRT-216ENST00000618262 MBD3L4A6NDZ8 208 aaPredicted RBP10.17□□□□□ -0.78
SRRT-216ENST00000618262 MBD3L3A6NE82 208 aaPredicted RBP10.17□□□□□ -0.78
SRRT-216ENST00000618262 MBD3L5A6NJ08 208 aaPredicted RBP10.17□□□□□ -0.78
SRRT-216ENST00000618262 ZNF878C9JN71 531 aa10.17□□□□□ -0.78
SRRT-216ENST00000618262 J3QLW9 94 aa10.17□□□□□ -0.78
SRRT-216ENST00000618262 CELA3BP08861 270 aa10.17□□□□□ -0.78
SRRT-216ENST00000618262 MMP9P14780 707 aa10.17□□□□□ -0.78
SRRT-216ENST00000618262 CA7P43166 264 aa10.17□□□□□ -0.78
SRRT-216ENST00000618262 HIST1H1AQ02539 215 aaPredicted RBP10.17□□□□□ -0.78
SRRT-216ENST00000618262 EIF2B1Q14232 305 aaKnown RBP10.17□□□□□ -0.78
SRRT-216ENST00000618262 MBD3L2Q8NHZ7 208 aaPredicted RBP10.17□□□□□ -0.78
SRRT-216ENST00000618262 SCRT1Q9BWW7 348 aa10.17□□□□□ -0.78
SRRT-216ENST00000618262 ZNF835Q9Y2P0 537 aa10.17□□□□□ -0.78
SRRT-216ENST00000618262 TRBV24-1A0A075B6N3 115 aa10.17□□□□□ -0.78
SRRT-216ENST00000618262 DAPL1A0PJW8 107 aa10.17□□□□□ -0.78
SRRT-216ENST00000618262 F5H5K5 113 aa10.17□□□□□ -0.78
SRRT-216ENST00000618262 DNPH1O43598 174 aa10.17□□□□□ -0.78
SRRT-216ENST00000618262 ZNF207O43670 478 aaKnown RBP10.17□□□□□ -0.78
SRRT-216ENST00000618262 SS18L1O75177 396 aaPredicted RBP10.17□□□□□ -0.78
SRRT-216ENST00000618262 ADORA2A-AS1P86434 159 aa10.17□□□□□ -0.78
SRRT-216ENST00000618262 SRD5A3Q9H8P0 318 aa10.17□□□□□ -0.78
SRRT-216ENST00000618262 UBR5O95071 2799 aaPredicted RBP10.16□□□□□ -0.78
SRRT-216ENST00000618262 POLQO75417 2590 aa10.16□□□□□ -0.78
SRRT-216ENST00000618262 IGKV3D-15A0A087WSY6 115 aa10.16□□□□□ -0.78
SRRT-216ENST00000618262 NPIPB13A6NJU9 1138 aa10.16□□□□□ -0.78
SRRT-216ENST00000618262 NPIPB4C9JG80 1138 aa10.16□□□□□ -0.78
SRRT-216ENST00000618262 FUT3P21217 361 aa10.16□□□□□ -0.78
SRRT-216ENST00000618262 NAA38Q9BRA0 125 aaKnown RBP10.16□□□□□ -0.78
SRRT-216ENST00000618262 NMNAT2Q9BZQ4 307 aa10.16□□□□□ -0.78
SRRT-216ENST00000618262 HECTD1Q9ULT8 2610 aa10.16□□□□□ -0.78
SRRT-216ENST00000618262 HRNRQ86YZ3 2850 aaPredicted RBP10.16□□□□□ -0.78
SRRT-216ENST00000618262 IRGMA1A4Y4 181 aa10.16□□□□□ -0.78
SRRT-216ENST00000618262 IFNL4K9M1U5 179 aa10.16□□□□□ -0.78
SRRT-216ENST00000618262 YPEL1O60688 119 aa10.16□□□□□ -0.78
SRRT-216ENST00000618262 PRDX4Q13162 271 aa10.16□□□□□ -0.78
SRRT-216ENST00000618262 MIDNQ504T8 468 aa10.16□□□□□ -0.78
SRRT-216ENST00000618262 ZNF66Q6ZN08 573 aa10.16□□□□□ -0.78
SRRT-216ENST00000618262 ZNF101Q8IZC7 436 aa10.16□□□□□ -0.78
SRRT-216ENST00000618262 ZNF418Q8TF45 676 aaPredicted RBP10.16□□□□□ -0.78
SRRT-216ENST00000618262 YPEL2Q96QA6 119 aa10.16□□□□□ -0.78
SRRT-216ENST00000618262 INPP5EQ9NRR6 644 aa10.16□□□□□ -0.78
SRRT-216ENST00000618262 TMEM106BQ9NUM4 274 aa10.16□□□□□ -0.78
SRRT-216ENST00000618262 RBMXP38159 391 aaKnown RBP10.15□□□□□ -0.78
SRRT-216ENST00000618262 PTH2RP49190 550 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 SLC25A47Q6Q0C1 308 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 SLC22A24Q8N4F4 322 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 LINC01560Q8TB33 94 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 IL22RA2Q969J5 263 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 MSI2Q96DH6 328 aaKnown RBP10.15□□□□□ -0.78
SRRT-216ENST00000618262 SEC22AQ96IW7 307 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 OR10C1Q96KK4 312 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 ENY2Q9NPA8 101 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 ABRACLQ9P1F3 81 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 KLK11Q9UBX7 282 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 DOPEY2Q9Y3R5 2298 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 USP9YO00507 2555 aaPredicted RBP10.15□□□□□ -0.78
SRRT-216ENST00000618262 C5orf63A6NC05 138 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 IGHMP01871 453 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 ZNF32P17041 273 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 TMEM69Q5SWH9 247 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 SLC35F2Q8IXU6 374 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 OR10G4Q8NGN3 311 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 TMEM54Q969K7 222 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 SLC25A38Q96DW6 304 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 BTF3L4Q96K17 158 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 PECRQ9BY49 303 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 SIRPDQ9H106 197 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 NOX4Q9NPH5 578 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 JKAMPQ9P055 326 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 LHFPL6Q9Y693 200 aa10.15□□□□□ -0.78
SRRT-216ENST00000618262 A0A1W2PPK0 400 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 DEGS1O15121 323 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 HYPMO75409 117 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 OR3A4PP47883 348 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 RND2P52198 227 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 TCL1AP56279 114 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 RUNX1Q01196 453 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 ZNF684Q5T5D7 378 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 C15orf40Q8WUR7 153 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 SLAMF6Q96DU3 332 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 ANAPC13Q9BS18 74 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 SMDT1Q9H4I9 107 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 LOC102725191A0A1B0GVB3 256 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 OOEPA6NGQ2 149 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 OR2T8A6NH00 312 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 B4DEV8 164 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 E9PLN8 166 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 ADH4P08319 380 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 IGLC2P0DOY2 106 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 IGLC3P0DOY3 106 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 MDKP21741 143 aaPredicted RBP10.14□□□□□ -0.79
SRRT-216ENST00000618262 SRSF2Q01130 221 aaKnown RBP10.14□□□□□ -0.79
SRRT-216ENST00000618262 EFNB3Q15768 340 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 HIST3H3Q16695 136 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 NRN1LQ496H8 165 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 ARL9Q6T311 187 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms