RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 TMEM242Q9NWH2 141 aa4.72□□□□□ -1.65
CPNE4-214ENST00000617767 BOKQ9UMX3 212 aaPredicted RBP4.72□□□□□ -1.65
CPNE4-214ENST00000617767 WASHC3Q9Y3C0 194 aa4.72□□□□□ -1.65
CPNE4-214ENST00000617767 ZNF736B4DX44 427 aaPredicted RBP4.71□□□□□ -1.65
CPNE4-214ENST00000617767 B5MCH6 92 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 GPR137BO60478 399 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 CLDN1O95832 211 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 SEC11BP0C7V7 166 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 LYL1P12980 280 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 HRH1P35367 487 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 UBE2NP61088 152 aaKnown RBP4.71□□□□□ -1.65
CPNE4-214ENST00000617767 DEFB109BQ30KR1 87 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 COX19Q49B96 90 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 SPSB3Q6PJ21 355 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 OR5AU1Q8NGC0 362 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 OR4A5Q8NH83 315 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 ARHGAP5-AS1Q96IT6 56 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 EAF1Q96JC9 268 aaPredicted RBP4.71□□□□□ -1.65
CPNE4-214ENST00000617767 FER1L6-AS2Q96M78 137 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 UHRF2Q96PU4 802 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 IMMP2LQ96T52 175 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 FOXB1Q99853 325 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 SAMD10Q9BYL1 202 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 TP73-AS1Q9UF72 201 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 FBXL7Q9UJT9 491 aa4.71□□□□□ -1.65
CPNE4-214ENST00000617767 STRAPQ9Y3F4 350 aaKnown RBP4.71□□□□□ -1.65
CPNE4-214ENST00000617767 CENPEQ02224 2701 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 A0A0A6YYD4 124 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 C5orf49A4QMS7 147 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 ZNF503-AS2A6NEH8 195 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 ST8SIA3O43173 380 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 IGFBP3P17936 291 aaPredicted RBP4.71□□□□□ -1.66
CPNE4-214ENST00000617767 CSRP1P21291 193 aaKnown RBP4.71□□□□□ -1.66
CPNE4-214ENST00000617767 GALR1P47211 349 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 ARF1P84077 181 aaKnown RBP4.71□□□□□ -1.66
CPNE4-214ENST00000617767 HOXA4Q00056 320 aaPredicted RBP4.71□□□□□ -1.66
CPNE4-214ENST00000617767 PSG4Q00888 419 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 KISS1Q15726 138 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 HIST3H3Q16695 136 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 ZNF584Q8IVC4 421 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 SLC22A24Q8N4F4 322 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 TMEM217Q8N7C4 229 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 TCTEX1D1Q8N7M0 179 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 FDCSPQ8NFU4 85 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 PPP1R35Q8TAP8 253 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 DAZAP1Q96EP5 407 aaKnown RBP4.71□□□□□ -1.66
CPNE4-214ENST00000617767 SRSF8Q9BRL6 282 aaKnown RBP4.71□□□□□ -1.66
CPNE4-214ENST00000617767 PYGO2Q9BRQ0 406 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 AK3Q9UIJ7 227 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 JPT1Q9UK76 154 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 hCG_38984A0A1B0GV85 526 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 GAGE12HA6NDE8 117 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 TGFAP01135 160 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 CD1AP06126 327 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 OPRM1P35372 400 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 MTCP1P56278 107 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 ADIRFQ15847 76 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 PCK2Q16822 640 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 C6orf201Q7Z4U5 140 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 TGIF2LYQ8IUE0 185 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 OR5AS1Q8N127 324 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 KLHDC1Q8N7A1 406 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 CNEP1R1Q8N9A8 125 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 ZFP62Q8NB50 900 aaPredicted RBP4.71□□□□□ -1.66
CPNE4-214ENST00000617767 SUMF1Q8NBK3 374 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 OR10X1Q8NGY0 326 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 OR5B12Q96R08 314 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 TMEM59Q9BXS4 323 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 FNDC4Q9H6D8 234 aaPredicted RBP4.71□□□□□ -1.66
CPNE4-214ENST00000617767 NRN1Q9NPD7 142 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 PRSS50Q9UI38 385 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 ETV7Q9Y603 341 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 DOCK11Q5JSL3 2073 aa4.71□□□□□ -1.66
CPNE4-214ENST00000617767 MUC21A0A0G2JKD1 596 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 MUC21A0A140T8X8 626 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 RAD51DO75771 328 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 NGFP01138 241 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 HSPB1P04792 205 aaKnown RBP4.7□□□□□ -1.66
CPNE4-214ENST00000617767 PET100P0DJ07 73 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 BLVRBP30043 206 aaPredicted RBP4.7□□□□□ -1.66
CPNE4-214ENST00000617767 NKX2-1P43699 371 aaPredicted RBP4.7□□□□□ -1.66
CPNE4-214ENST00000617767 AMTP48728 403 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 RRADP55042 308 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 PLAC9Q5JTB6 97 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 MUC21Q5SSG8 566 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 ZNF562Q6V9R5 426 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 NEGR1Q7Z3B1 354 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 Q8N976 141 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 TMEM229BQ8NBD8 167 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 FAM173AQ9BQD7 235 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 NAA38Q9BRA0 125 aaKnown RBP4.7□□□□□ -1.66
CPNE4-214ENST00000617767 LINC00470Q9BZP3 86 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 CRIM1Q9NZV1 1036 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 BORCS7-ASMTA0A0B4J1R7 106 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 K7N7A8 449 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 ZNF883P0CG24 379 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 ZNF708P17019 499 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 LHX2P50458 406 aa4.7□□□□□ -1.66
CPNE4-214ENST00000617767 SSBP2P81877 361 aaPredicted RBP4.7□□□□□ -1.66
CPNE4-214ENST00000617767 RELBQ01201 579 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms